Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2109
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   0.94 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   2.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   5.0  
AY062197-1|AAL58558.1|  150|Anopheles gambiae cytochrome P450 CY...    23   5.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.0  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   6.6  
AY748844-1|AAV28190.1|  107|Anopheles gambiae cytochrome P450 pr...    23   8.8  
AY062203-1|AAL58564.1|  149|Anopheles gambiae cytochrome P450 CY...    23   8.8  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 0.94
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 215 PVXPQNWPGLRGPDEPVSLFGDPGRGGSFLP 123
           P  P+ +PG  GP+    L G+PG+ G  +P
Sbjct: 478 PQGPRGYPGQPGPE---GLRGEPGQPGYGIP 505



 Score = 24.2 bits (50), Expect = 2.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 121 QGRKXPPLPGSPKSETGSSGPRRPGQFCGXTG 216
           +GR   P P  P+   G  GP+    F G  G
Sbjct: 407 EGRPGAPGPKGPRGYEGPQGPKGMDGFDGEKG 438



 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 203 QNWPGLRGPDEPVSLFGDPGRGG 135
           + +PG+ G D    L G+PG  G
Sbjct: 612 RGYPGMPGEDGTPGLRGEPGPKG 634


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -3

Query: 215 PVXPQNWPGLRGPDEPVSLFGDPGRGG 135
           P  P+  PGLRGP       GD G  G
Sbjct: 105 PPGPKGNPGLRGPKGERGGMGDRGDPG 131



 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 194 PGLRGPDEPVSLFGDPGRG 138
           PGL GP  P    G PG G
Sbjct: 331 PGLEGPSGPKGDAGVPGYG 349


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +1

Query: 136 PPLPGSPKSETGSSGPRRPGQFCGXTG 216
           PP P S  S + SS        CG  G
Sbjct: 789 PPTPASLSSSSSSSSSASSTSLCGGNG 815


>AY062197-1|AAL58558.1|  150|Anopheles gambiae cytochrome P450
           CYP4C27 protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 119 YRGERXHLYPDPQKVKPVHLDPED 190
           +R ER   YPDP+K  P    PE+
Sbjct: 107 HRDER--FYPDPEKFDPDRFLPEN 128


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 152 DPGRGGSFLPC 120
           +P RGG F+PC
Sbjct: 714 NPARGGPFMPC 724


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 442 GVISLGTRXXCWXPPGRGW 386
           G+  L     C  PPGRGW
Sbjct: 552 GMFQLSDEYWC-SPPGRGW 569


>AY748844-1|AAV28190.1|  107|Anopheles gambiae cytochrome P450
           protein.
          Length = 107

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 137 HLYPDPQKVKP 169
           H+YPDP++  P
Sbjct: 18  HIYPDPERFDP 28


>AY062203-1|AAL58564.1|  149|Anopheles gambiae cytochrome P450
           CYP4C25 protein.
          Length = 149

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 113 MYYRGERXHLYPDPQKVKPVHLDPED 190
           +Y       ++P+P K  P H  PE+
Sbjct: 103 VYQLHRNPEVFPNPDKFNPDHFLPEN 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,537
Number of Sequences: 2352
Number of extensions: 9560
Number of successful extensions: 38
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)