Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2106
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   5.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.4  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 184 THYCFTAGSLYLFKRAHKNLQK 119
           TH+C T GSL  FK   K  ++
Sbjct: 312 THFCRTLGSLPPFKWLFKKKKR 333


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 330 LNXWTSSRPTGVKWLPESIGISNANAVTHL 241
           +  W+  RP   K+ PE I   N +  TH+
Sbjct: 528 ITSWSQKRPGAGKFTPEDI---NPSLCTHI 554


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 175 CFTAGSLYLFKRAHKNLQKNLK 110
           CF  G + +F R   ++ +NLK
Sbjct: 195 CFVPGVVAMFSRKPCSINENLK 216


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 175 CFTAGSLYLFKRAHKNLQKNLK 110
           CF  G + +F R   ++ +NLK
Sbjct: 195 CFVPGVVAMFSRKPCSINENLK 216


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/21 (28%), Positives = 16/21 (76%)
 Frame = -3

Query: 425 IFLLTLFGKVNGIEDMSNLIF 363
           IFL+ +F ++  ++D+S++ +
Sbjct: 198 IFLVLVFVQMQSVQDLSDIFY 218


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 32  VYVISTQITLLFFLSSYYEFPKYRGKFKVFLEILV 136
           V +++T    + F +SY    K    F VF+ +++
Sbjct: 152 VTIVATLTVTIIFFASYQYGTKTYSLFIVFMTVIL 186


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 32  VYVISTQITLLFFLSSYYEFPKYRGKFKVFLEILV 136
           V +++T    + F +SY    K    F VF+ +++
Sbjct: 152 VTIVATLTVTIIFFASYQYGTKTYSLFIVFMTVIL 186


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 413 TLFGKVNGIEDMSNLIF 363
           T FG  +G+E +S LI+
Sbjct: 198 TFFGARHGLETLSQLIW 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,165
Number of Sequences: 336
Number of extensions: 2541
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)