BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2106
(550 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450 CY... 25 1.2
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 25 2.2
>AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450
CYP6S2 protein.
Length = 504
Score = 25.4 bits (53), Expect = 1.2
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 181 AFRYEEWCSRCTVKPXNSYLKMGDG--ICVANSYG 279
AF+ E + + K SYL GDG +C+A +G
Sbjct: 413 AFKPERFEDKTFAKTNPSYLAFGDGPRMCIAMRFG 447
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 24.6 bits (51), Expect = 2.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 4 HTASMKYKKGLRYIYANYTIILPEFIL*VPEISGKI 111
+T +KYKK +Y N I + L +PE + K+
Sbjct: 1133 YTVQLKYKKNTKYFNINSEQIDVQNFLEIPEDTKKL 1168
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,056
Number of Sequences: 2352
Number of extensions: 10252
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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