BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-2105 (400 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 3.1 AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 23 5.4 AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 5.4 AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 23 5.4 AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 23 5.4 AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 5.4 AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 5.4 AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 5.4 AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 23 5.4 >AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative differentiation regulator protein. Length = 1283 Score = 23.4 bits (48), Expect = 3.1 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +1 Query: 85 HHHISQRHGDPEAKQNTHAA 144 HHH++ HG P A ++ +A Sbjct: 720 HHHLTSPHGAPLALTSSKSA 739 >AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 22.6 bits (46), Expect = 5.4 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 321 GAXWEFKCPDG 289 G EFKCPDG Sbjct: 315 GCVKEFKCPDG 325 >AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 22.6 bits (46), Expect = 5.4 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 321 GAXWEFKCPDG 289 G EFKCPDG Sbjct: 315 GCVKEFKCPDG 325 >AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 22.6 bits (46), Expect = 5.4 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 321 GAXWEFKCPDG 289 G EFKCPDG Sbjct: 315 GCVKEFKCPDG 325 >AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. Length = 333 Score = 22.6 bits (46), Expect = 5.4 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 321 GAXWEFKCPDG 289 G EFKCPDG Sbjct: 314 GCVKEFKCPDG 324 >AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. Length = 333 Score = 22.6 bits (46), Expect = 5.4 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 321 GAXWEFKCPDG 289 G EFKCPDG Sbjct: 314 GCVKEFKCPDG 324 >AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 22.6 bits (46), Expect = 5.4 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 321 GAXWEFKCPDG 289 G EFKCPDG Sbjct: 315 GCVKEFKCPDG 325 >AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 22.6 bits (46), Expect = 5.4 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 321 GAXWEFKCPDG 289 G EFKCPDG Sbjct: 315 GCVKEFKCPDG 325 >AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein protein. Length = 373 Score = 22.6 bits (46), Expect = 5.4 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 321 GAXWEFKCPDG 289 G EFKCPDG Sbjct: 315 GCVKEFKCPDG 325 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 414,798 Number of Sequences: 2352 Number of extensions: 7836 Number of successful extensions: 17 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of database: 563,979 effective HSP length: 58 effective length of database: 427,563 effective search space used: 31639662 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -