Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2105
         (400 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g10760.1 68417.m01756 methyltransferase MT-A70, putative simi...    27   6.1  
At3g58650.1 68416.m06537 expressed protein                             26   8.0  

>At4g10760.1 68417.m01756 methyltransferase MT-A70, putative similar
           to  (N6-adenosine)-methyltransferase [Mus musculus]
           GI:10179948, m6A methyltransferase (MT-A70) [Homo
           sapiens] GI:2460037; contains Pfam profile PF05063:
           MT-A70 (S-adenosylmethionine-binding subunit of human
           mRNA:m6A methyl-transferase (MTase))
          Length = 685

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 89  ITSVRDMGIQRQSRIPTQHQA 151
           IT V+DM ++ ++RI TQH A
Sbjct: 10  ITVVKDMRVRLENRIRTQHDA 30


>At3g58650.1 68416.m06537 expressed protein
          Length = 723

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 69  YGVTLSSSHQSETWGSRGKAEY 134
           YG+  SSS Q  TWGS  ++++
Sbjct: 523 YGMKQSSSDQELTWGSSNESQH 544


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,790,695
Number of Sequences: 28952
Number of extensions: 166983
Number of successful extensions: 269
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 575830496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)