Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2103
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   0.94 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   0.94 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.2  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   2.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.8  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   3.8  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.7  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   6.7  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   6.7  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   6.7  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   6.7  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   8.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   8.8  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 447 LTGLLPAVLPNVCVKCTDADK 509
           L  +LP  L   C KCTD  K
Sbjct: 62  LKRVLPDALKTSCAKCTDKQK 82


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = +1

Query: 169 SALRKASSVTRTVWP---AAVHRCKRPNTPITSCTMHPSPPPAN-RSSGEYRRSGPCHCS 336
           +A  + S+ TRT      A+ +  +RP +   S   H   PP + + +  Y   GP + +
Sbjct: 247 TATVQLSTCTRTTLKNNRASPYPMQRPKSASLSPPPHVYNPPDHIQQATPYSAPGPTYST 306

Query: 337 WTCRLSDKRVFTPS 378
           W+   +   V +P+
Sbjct: 307 WSTVQTPTTVMSPT 320


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +3

Query: 405 HEACDLGRGMA---ALALTGLLPAVLPNVCVKCTDADK 509
           + AC L +G      + L  +LP  L   C KCT+  +
Sbjct: 43  YAACLLSKGPCPPQGVDLKRVLPEALQTNCAKCTEKQR 80


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 459 LPAVLPNVCVKCTDADK 509
           +P  L N C KC D  K
Sbjct: 62  IPDALKNECAKCNDKHK 78


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +1

Query: 193 VTRTVWPAAVHRCKRPNTPITSCTMHPSPPP 285
           + RT+W  +       + PI  C  H   PP
Sbjct: 229 IVRTIWSKSKLLIPVGHIPIRQCDDHRDRPP 259


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 583 VSTDRIISACLLGTLNS*LSPMSLGLSASV 494
           V  D++    LLG L S L+   L LSA+V
Sbjct: 152 VDEDKVNFVTLLGELKSALNAKGLILSAAV 181


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
 Frame = +3

Query: 414 CDLGRGMAALALTGL---LPAVLPNVCVKCTDADK 509
           C LG+G        L   +P  L N C KC +  K
Sbjct: 46  CILGKGKCTPEGEELKRDIPEALQNECAKCNEKHK 80


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 197 RVPSGPQLSTGASART 244
           R PSGP+LS  ++A T
Sbjct: 36  RYPSGPELSDRSAAYT 51


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 297 FGGISPLRTLSLFMDMSPFRQACIHAVTG 383
           +G  + L  LS+ +D  P+R  CI    G
Sbjct: 316 WGPDAGLGNLSVCIDQQPWRSYCIQPPCG 344


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 414 CDLGRGMA---ALALTGLLPAVLPNVCVKCTDADK 509
           C + RG     A  L  +LP  L + C KC++  K
Sbjct: 44  CIMDRGACTPDADELKRVLPDALKSDCAKCSEKQK 78


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
 Frame = +3

Query: 414 CDLGRGMAALALTGL---LPAVLPNVCVKCTDADK 509
           C LG+G        L   +P  L N C KC +  K
Sbjct: 46  CVLGKGKCTPEGEELKKDIPEALQNGCAKCNEKHK 80


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
 Frame = +3

Query: 414 CDLGRGMAALALTGL---LPAVLPNVCVKCTDADK 509
           C LG+G        L   +P  L N C KC +  K
Sbjct: 46  CVLGKGKCTPEGEELKKDIPEALQNGCAKCNEKHK 80


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 583 VSTDRIISACLLGTLNS*LSPMSLGLSASV 494
           V  D++    LLG L S L+   + LSA+V
Sbjct: 152 VDEDKVNFVTLLGELKSALNAKGMILSAAV 181


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 459 LPAVLPNVCVKCTDADK 509
           +P  L N C KC +  K
Sbjct: 63  IPDALQNECAKCNEKHK 79


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 232 KRPNTPITSCTMHPSPPP 285
           + P++P +  +  PSPPP
Sbjct: 216 EHPDSPNSKKSATPSPPP 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,532
Number of Sequences: 336
Number of extensions: 3429
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)