Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2103
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 31 0.80
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 31 0.80
08_02_0885 + 22268287-22268988 31 1.1
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 31 1.1
08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562... 29 2.4
11_06_0610 - 25449085-25453284 29 3.2
11_02_0037 - 7613632-7613727,7614452-7615507 29 3.2
08_02_0924 - 22660615-22660623,22661035-22661193,22661664-226625... 29 3.2
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733 29 3.2
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 29 4.2
01_06_1431 + 37317248-37317907 29 4.2
05_03_0458 + 14280953-14281866,14281964-14282912 28 5.6
05_02_0078 - 6386278-6386291,6386462-6386594,6386721-6388613,639... 28 5.6
01_01_0755 - 5827893-5829764 28 5.6
01_01_0754 - 5823076-5823089,5823797-5823911,5823992-5824045,582... 28 5.6
01_01_0699 + 5405178-5405356,5405478-5405693,5405808-5405919,540... 28 5.6
11_06_0690 + 26303733-26306540 28 7.4
09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238 28 7.4
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161... 28 7.4
07_01_0297 - 2156960-2157736 28 7.4
06_01_0308 + 2229025-2229260,2229448-2230145,2230377-2230469,223... 28 7.4
08_02_1382 + 26565137-26565210,26565330-26565468,26565489-265656... 27 9.8
08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634... 27 9.8
08_01_0910 + 8968896-8968932,8969111-8969181,8970417-8970740,897... 27 9.8
08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058 27 9.8
07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323 27 9.8
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 27 9.8
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 27 9.8
05_07_0100 + 27679280-27680320 27 9.8
05_03_0441 - 14037497-14038006,14038208-14038369 27 9.8
05_01_0245 - 1829921-1830359,1830449-1831002,1832016-1832144,183... 27 9.8
04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412 27 9.8
02_05_0827 - 32051086-32051445 27 9.8
02_04_0224 - 21059328-21059888,21060388-21060462,21060715-210607... 27 9.8
02_02_0264 + 8404879-8405106 27 9.8
02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-56... 27 9.8
01_06_1192 - 35302863-35303984,35305596-35306024 27 9.8
01_01_0917 + 7238721-7239078,7239590-7239957 27 9.8
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 224 TGASARTLPSPAARCIPPPRLRTGLRGNI---AAQDPVIVHGHV-AFQTS 361
T A PSP PPP G+ G + A P +V G+V +F TS
Sbjct: 285 TAAGVVAAPSPVTSLAPPPATAVGVSGGVRAPAEPPPAVVMGNVMSFSTS 334
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 179 GKRVR*R--VPSGPQLSTGASARTLPSPAARCIPPPRLRTG-LRGNIA 313
G+R R R + PQ + G+ A L + R PPPRLRT L G +A
Sbjct: 156 GRRSRPRRCLAGRPQATAGSPAARLAARRLRTSPPPRLRTSRLAGAVA 203
>08_02_0885 + 22268287-22268988
Length = 233
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 136 LTMTSGYLMERSALRKASSVTR--TVWPAAVHRCKRPNTPITSCTMHPSPPP 285
LTMT +M KA+ + T PA RC+RP+ +C M PP
Sbjct: 31 LTMTHNCVMYLKNKEKAAGSVKGKTAIPATPRRCRRPDGSNPACKMRWERPP 82
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 211 PAAVHRCKRPNTPITSC-TMHPSPPPANRSSGEYR 312
P HRC P+ +C T P+PP SS E R
Sbjct: 328 PRLTHRCSTTTQPLPTCGTPAPAPPAGQPSSAEDR 362
>08_01_0651 +
5622786-5624165,5624720-5624881,5624984-5625173,
5625253-5625284
Length = 587
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +1
Query: 262 TMHPSPPPANRSSGEYRRSGPCHCS---WT 342
T PPP NR +R S PC C+ WT
Sbjct: 127 TSDRQPPPMNRRMRHHRASAPCPCADVLWT 156
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 203 PSGPQLSTGASARTLPSPAARCIPPPRLR 289
PS P+ S+ + ++LP PA +PPP ++
Sbjct: 1106 PSVPKASSPPTEKSLPPPATVSLPPPTVK 1134
>11_02_0037 - 7613632-7613727,7614452-7615507
Length = 383
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 135 PYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE-HSHHQLHDASLP 278
P+ + G + +G AY AR+ P P H HH H +P
Sbjct: 223 PHHHHKNGGGLLVAGGDPYGAAYAAARALPPPPPPPPHGHHHHHQIIMP 271
>08_02_0924 -
22660615-22660623,22661035-22661193,22661664-22662539,
22663009-22663119,22663528-22663556,22663690-22663762,
22664804-22665100,22665193-22665345,22665979-22666068,
22667520-22667809,22667860-22668349
Length = 858
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 93 WVNLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQ 233
W++LR + DGN R PN K T ES++ +R+ P +Q
Sbjct: 182 WLDLRSVCTDGNQMDEWVIRAPNLKHLTIESDYDYLWRV-EELPSLQ 227
>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
Length = 181
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 229 CKRPNTPITSCTMHPSPPPA 288
CK PI+ CT P+PPPA
Sbjct: 104 CKVQAPPISQCTAVPTPPPA 123
>01_06_1713 - 39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 291 QVFGGISPLRTLSLFMDMSPFRQACIHAVTGTDAAKDLHEACDLGRGMAA 440
++ GG L LSL + + F+ A ++ + DAA DL ++GR + A
Sbjct: 1078 ELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKA 1127
>01_06_1431 + 37317248-37317907
Length = 219
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 197 RVPSGPQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVI 331
R P P S+ +++ T SPAA PPRL + AA P I
Sbjct: 90 RSPFSPPPSSSSNSSTTASPAAAAAAPPRLIPTIPRPAAALAPHI 134
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +1
Query: 238 PNTPIT-SCTMHPSPPPANRSSGEYRRSGPCHCSWTCRLSDKRVFTPSPAQTPLK 399
P P T SC+ HP+PPP + S S + P+ AQTP +
Sbjct: 77 PLPPTTLSCSSHPTPPPPPSPTTSPSASSLPPVPTPRSASSSKCSAPTSAQTPTR 131
>05_02_0078 -
6386278-6386291,6386462-6386594,6386721-6388613,
6391153-6391239,6391691-6391765,6393982-6394327,
6394428-6394450
Length = 856
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 364 HACLKGDMSMNNDRVLSGDIPPKTCSQAGGRDASCSW*WECSGA 233
H + D S DR++S I +A GRD W E SGA
Sbjct: 288 HCNVYSDKSNEADRLVSAKISSHENKEASGRDIYDRWTSESSGA 331
>01_01_0755 - 5827893-5829764
Length = 623
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -2
Query: 517 SLGLSASVHLTHTFGSTAGRRPVSARAAIP 428
S+G +++ L+++FG+T GR PV+A A P
Sbjct: 77 SVGPCSTLLLSNSFGATYGRPPVTAAYAPP 106
>01_01_0754 -
5823076-5823089,5823797-5823911,5823992-5824045,
5825629-5827251
Length = 601
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 517 SLGLSASVHLTHTFGSTAGRRPVSARAAIP 428
S+G +++ L+H+FG T GR PV+ A P
Sbjct: 66 SVGPCSTLLLSHSFGYTYGRGPVTVAYAPP 95
>01_01_0699 +
5405178-5405356,5405478-5405693,5405808-5405919,
5406335-5406397,5406468-5406606,5406822-5406877,
5408088-5408161,5408270-5408417,5408505-5408678,
5408809-5408896,5408996-5409109,5409728-5409825,
5409927-5410017,5410440-5410534,5410672-5410825,
5410864-5410876,5411276-5411384
Length = 640
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 13/56 (23%)
Frame = +1
Query: 169 SALRKASSVTRTVWP-AAVHRCK-----RPNTPI-------TSCTMHPSPPPANRS 297
SA AS+ + + P AA H C+ RP +P+ + +MHPSPPP S
Sbjct: 7 SAPSHASAASSSPLPFAAAHPCRASWTPRPTSPLPPLSLLRATASMHPSPPPEGHS 62
>11_06_0690 + 26303733-26306540
Length = 935
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 212 PQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVIVH 337
P L T + + S A PPP LR L G + P+IV+
Sbjct: 707 PNLCTLDPEKEVESEAGIFEPPPALRAQLSGPVQCGSPLIVY 748
>09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238
Length = 472
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 234 APEHSHHQLHDAS-LPPACEQVFGGISP 314
A H HHQ+ A L P +Q FGG SP
Sbjct: 375 AEHHHHHQIPMAQPLVPNLQQQFGGSSP 402
>07_03_0802 -
21614891-21615195,21615637-21615823,21615939-21616154,
21616669-21616872,21617336-21617569,21617670-21617763,
21618844-21618890,21619293-21619309,21620183-21620459
Length = 526
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 429 GMAALALTGLLPAVLPNVCVKCTDADKPRDIGDSYEFKVPNKQAD 563
G+AA A G + V+ VCV T A +P+ I + +F + ++ D
Sbjct: 5 GLAADARCGAIDPVVVLVCVVATLATQPKQIHEIKDFLLTARRKD 49
>07_01_0297 - 2156960-2157736
Length = 258
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = -1
Query: 503 CISTLDAYVRKYGREKAGQRQSCHSSS*ITSFV----QIFSGVCAGDGV 369
C DA + YG EK GQR C + + + + V AG GV
Sbjct: 149 CDDDDDAILPDYGEEKEGQRTMCFGENAVRKIAVCSPDLVAAVIAGSGV 197
>06_01_0308 +
2229025-2229260,2229448-2230145,2230377-2230469,
2230815-2231992
Length = 734
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 548 GNFEFIAISDVPRLICISTLDAYVRKYGREKAGQR 444
G+++ I IS + +ICISTL +++ EK QR
Sbjct: 339 GSYDCICISIIFLIICISTLLIKIQRMKLEKEKQR 373
>08_02_1382 +
26565137-26565210,26565330-26565468,26565489-26565603,
26565761-26565828,26565907-26566551,26566927-26567031,
26567115-26567465
Length = 498
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -2
Query: 493 HLTHTFGSTAGRRPVSARAAIPRPKSQASCKSLAASVPVTA*IHACLKGDMSMNNDRVLS 314
HL G+ A R +ARAAIP P+ + HA + M++DR +
Sbjct: 229 HLLRGGGAGARDRKATARAAIPAPRRDGAA------------AHAPRRLHQMMHDDRAAA 276
Query: 313 GDIPPKTCSQAGGR 272
P + GGR
Sbjct: 277 APQPSSSSGDGGGR 290
>08_02_0824 +
21561699-21562415,21563294-21563362,21563424-21563459,
21564533-21564600,21565259-21565277,21565662-21565763,
21566173-21566288,21566501-21566595,21568093-21568264,
21568413-21568493,21569732-21569801,21570106-21570132
Length = 523
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 203 PSGPQLSTGASARTLPSPAARCIPPPRL 286
P GP T +S+ +LPS R PPPRL
Sbjct: 4 PPGPAPGTSSSSSSLPSRRRR-RPPPRL 30
>08_01_0910 +
8968896-8968932,8969111-8969181,8970417-8970740,
8972878-8972934,8974578-8974641,8974749-8974810
Length = 204
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 214 AAVHRCKRPNTPITSCTMHPSP 279
A +HRC NTP+ C HP P
Sbjct: 4 AQLHRC---NTPVQGCYSHPMP 22
>08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058
Length = 484
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -1
Query: 284 GGGEGCIVQLVMGVFGRLHLWTAAGQTVRVTELAFRSADLSIR*PEVIVRLVVTVSEK 111
GGGE + L V GR+ A Q VR + L+ R D+ P V +R +E+
Sbjct: 26 GGGEDRLSALPDAVLGRIVSHLKAWQAVRTSVLSKRWRDVWASAPRVDIRHPCACNER 83
>07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323
Length = 340
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 130 TSLTMTS-GYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHP 273
T L MTS G ++ TVWPAA+ RP P T + P
Sbjct: 80 TLLRMTSSGAAAVNFTFHFHNNCPETVWPAALSSAGRPPFPTTGFALPP 128
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 103 FAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPP 282
F +FS T S T +S SA+ +A++ T T NT S +P+PP
Sbjct: 77 FLLFSTTALYSSTSSSS----SSAVLRATTTTTTTTTTTT---TTTNTFTLSFQANPNPP 129
Query: 283 PANRSS 300
P+N S+
Sbjct: 130 PSNLSN 135
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +1
Query: 235 RPNTPITSCTMHPSPPPANR--SSGEYRRSG 321
RPN P+ P PPP N + E RR G
Sbjct: 574 RPNRPVGMAPFMPPPPPPNNRGTKREQRRPG 604
>05_07_0100 + 27679280-27680320
Length = 346
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 209 GPQLSTGASARTLPSPAARCIPPP 280
GP LS AS R PSP+ +PPP
Sbjct: 130 GPTLSASASKRPSPSPSP--VPPP 151
>05_03_0441 - 14037497-14038006,14038208-14038369
Length = 223
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +2
Query: 218 LSTGASAR--TLPSPA-ARCIPPPRLRTGLRGN 307
LS GASA+ TLPSPA ARC P R RG+
Sbjct: 102 LSLGASAQATTLPSPALARCGTPRPRRPPPRGS 134
>05_01_0245 -
1829921-1830359,1830449-1831002,1832016-1832144,
1832249-1832339,1832646-1832758,1832836-1833079,
1833193-1833281,1833357-1833424,1833790-1833874,
1834038-1834190
Length = 654
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 238 PNTPITSCTMHPSPPPANRS-SGEYRRSGP 324
P P+ S HP PP + E++R+GP
Sbjct: 382 PEAPLASDMAHPPPPKTEKELVDEWKRAGP 411
>04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412
Length = 184
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Frame = +1
Query: 259 CTMHPSPPP-----ANRSSGEYRRSGPCHC 333
C HP PPP A + G S PCHC
Sbjct: 128 CDCHPKPPPPAPAPAKPACGCPAWSSPCHC 157
>02_05_0827 - 32051086-32051445
Length = 119
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 248 PSPAARCIPPPRLRTGLRGNIAA 316
P+ AARC P PRL G G AA
Sbjct: 78 PAAAARCPPDPRLSAGFGGWPAA 100
>02_04_0224 -
21059328-21059888,21060388-21060462,21060715-21060798,
21060866-21061183,21061511-21061722,21061766-21062030
Length = 504
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 419 ITSFVQIFSGVCAGDGVNTRLSERRHV 339
+ S ++F G AGD V R+ E HV
Sbjct: 19 VQSLAELFGGPGAGDAVEWRMPENHHV 45
>02_02_0264 + 8404879-8405106
Length = 75
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 145 TSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGEYR 312
T+ + + + + T +V P A R P P +S + P+P P S EYR
Sbjct: 3 TNAHAFQTTTETARAQNTASVPPHAPSRTPYPPLPSSSSSSTPTPTPVLAVSREYR 58
>02_01_0083 -
566201-567127,567223-567464,567623-567880,568173-568298,
568420-568489
Length = 540
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = +1
Query: 259 CTMHPSPPPANRSSGEYRRSGPCHCSWTCRLSDKRVFTPSPAQTPLKICTKL 414
CT HP P + SS S CHC K+ + L +C L
Sbjct: 39 CTAHPLGEPNSNSSLSSNCSSSCHCLQGISQEGKKHVSNKTVIVTLLVCVIL 90
>01_06_1192 - 35302863-35303984,35305596-35306024
Length = 516
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +3
Query: 27 TVSWSSAHLNLRCATLKLTASTWVNLRGLLGDGNNEPYDDFRLPNGKI 170
TV WSSA R L+LT S NLR LL N + F P K+
Sbjct: 130 TVGWSSATAGRRAKVLRLTRSG--NLR-LLDAKNQYVWQSFDKPADKL 174
>01_01_0917 + 7238721-7239078,7239590-7239957
Length = 241
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 227 GASARTLPSPAARCIPPPRLRTG 295
G+S +L SP A PPP LRTG
Sbjct: 155 GSSIFSLKSPLAWTQPPPSLRTG 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,872,291
Number of Sequences: 37544
Number of extensions: 459729
Number of successful extensions: 2015
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2001
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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