Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2103
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.39 
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    26   0.90 
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    26   1.2  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    25   2.1  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   2.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.6  
Y17688-1|CAA76813.1|  153|Anopheles gambiae gSG1 protein protein.      24   4.8  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     24   4.8  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   6.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   6.3  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   8.4  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 291  QVFGGISPLRTLSLFMDMSPFRQACIHAVTGTDAAKDLHEACDLGRGMAA 440
            ++ GG   L  LSL + M  ++ A ++ +   DAA DL    ++G  + A
Sbjct: 1082 ELSGGQRSLVALSLILAMLKYKPAPLYILDEVDAALDLSHTQNIGNMLKA 1131


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 223 HRCKRPNTPITSCTMHPSPPPANRSSGEYRRSGPCHCS 336
           HRC++P      C M  +  P + +  +Y R    +CS
Sbjct: 205 HRCRKPGHMKRDCPMESNNTPTSTTMRDYSRKNE-NCS 241


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/60 (28%), Positives = 24/60 (40%)
 Frame = +1

Query: 214 AAVHRCKRPNTPITSCTMHPSPPPANRSSGEYRRSGPCHCSWTCRLSDKRVFTPSPAQTP 393
           + V+   R  TP T+ T   SP PA      +  + P   SW   +      T +P  TP
Sbjct: 660 SVVYPIYRRTTPTTTTTTTASPAPAPAIRSRFGDNRP---SWRPLIVPHATTTKTPTTTP 716


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 454 PVSARAAIPRPKSQASCKSLAASVPVTA 371
           PV+  AA   PK++ S   +  SVP+T+
Sbjct: 183 PVANTAAAATPKARHSIPEVVKSVPITS 210


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 346 RLSDKRVFTPSPAQTPLKIC 405
           ++ DKR F   PA+T L+IC
Sbjct: 883 KVKDKREFEFDPARTVLEIC 902


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 244 TPITSCTMHPSPPPANRSS 300
           T   S + HPSP PA R+S
Sbjct: 734 TSSKSASTHPSPHPATRAS 752


>Y17688-1|CAA76813.1|  153|Anopheles gambiae gSG1 protein protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 278 GEGCIVQLVMGVFGRL 231
           GE C++QLV G+  RL
Sbjct: 18  GEQCVIQLVRGMVTRL 33


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 278 GEGCIVQLVMGVFGRL 231
           GE C++QLV G+  RL
Sbjct: 18  GEQCVIQLVRGMVTRL 33


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = +1

Query: 121 TVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPPP 285
           T TTS T TSG     S  R   SV   + P  + +      P+ S    P+ PP
Sbjct: 43  TTTTSTTSTSGASAASSPTRDEMSVVVPISPLHIKQ-----EPLGSDGPMPAQPP 92



 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 231 QAPEHSHHQLHDASLP 278
           Q P H HHQ H    P
Sbjct: 102 QLPHHPHHQHHPQQQP 117


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = +1

Query: 121 TVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPPP 285
           T TTS T TSG     S  R   SV   + P  + +      P+ S    P+ PP
Sbjct: 43  TTTTSTTSTSGASAASSPTRDEMSVVVPISPLHIKQ-----EPLGSDGPMPAQPP 92



 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 231 QAPEHSHHQLHDASLP 278
           Q P H HHQ H    P
Sbjct: 102 QLPHHPHHQHHPQQQP 117


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 16/68 (23%), Positives = 30/68 (44%)
 Frame = +1

Query: 157 LMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGEYRRSGPCHCS 336
           L ER  + K + V      A + + +R     T C++H +P  + + +  +R     H +
Sbjct: 417 LWERRDMTKRARVRLPRAEAELVKDRRLELGYTYCSVHEAPKVSGQLTRCFRCLERGHIA 476

Query: 337 WTCRLSDK 360
            TC   D+
Sbjct: 477 ATCTGEDR 484


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,769
Number of Sequences: 2352
Number of extensions: 15452
Number of successful extensions: 45
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)