Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2102
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    54   7e-10
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    54   7e-10
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.6  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   6.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.2  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 54.0 bits (124), Expect = 7e-10
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = +2

Query: 47  LSGGEKQRVGIARAILKDAPLLLHDEATSSLDSLTEHAILQALK-AATVGKTSICIAHRL 223
           +SGGEK+R+  A  +L +  L+  DE TS LDS     ++Q LK  A  GKT IC  H+ 
Sbjct: 220 ISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGKTVICTIHQP 279

Query: 224 STVADA--DEILVLERG 268
           S+   +  D++L++  G
Sbjct: 280 SSEVYSMFDKLLLMSEG 296


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 54.0 bits (124), Expect = 7e-10
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = +2

Query: 47  LSGGEKQRVGIARAILKDAPLLLHDEATSSLDSLTEHAILQALK-AATVGKTSICIAHRL 223
           +SGGEK+R+  A  +L +  L+  DE TS LDS     ++Q LK  A  GKT IC  H+ 
Sbjct: 220 ISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGKTVICTIHQP 279

Query: 224 STVADA--DEILVLERG 268
           S+   +  D++L++  G
Sbjct: 280 SSEVYSMFDKLLLMSEG 296


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 38  GLKLSGGEKQRVGIARAILKDAPLLLH 118
           G+KL+  +  + G  RA+ K   LL +
Sbjct: 186 GIKLNASDNDKDGYKRAVYKIGQLLTY 212


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 38  GLKLSGGEKQRVGIARAILKDAPLLLH 118
           G+KL+  +  + G  RA+ K   LL +
Sbjct: 186 GIKLNASDNDKDGYKRAVYKIGQLLTY 212


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 411 KNMWSQCRRLRFLI 370
           K  WSQC  + FL+
Sbjct: 120 KKRWSQCMYMYFLL 133


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 411 KNMWSQCRRLRFLI 370
           K  WSQC  + FL+
Sbjct: 434 KKRWSQCMYMYFLL 447


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 411 KNMWSQCRRLRFLI 370
           K  WSQC  + FL+
Sbjct: 667 KKRWSQCMYMYFLL 680


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 411 KNMWSQCRRLRFLI 370
           K  WSQC  + FL+
Sbjct: 667 KKRWSQCMYMYFLL 680


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 444 SPPNGERXPSPMDFS 488
           +PP+GE    P+D S
Sbjct: 231 TPPSGEPGNGPLDLS 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,698
Number of Sequences: 336
Number of extensions: 1201
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)