Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2101
(550 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1001 + 26817231-26818246,26818341-26818525,26818614-268189... 36 0.021
10_08_0950 + 21764902-21765912 32 0.35
04_01_0450 - 5840015-5840055,5840635-5840977,5841326-5841537,584... 31 0.80
11_01_0574 + 4582098-4582331,4582450-4582492,4582683-4582757,458... 30 1.1
12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110 30 1.4
03_02_0517 + 9054816-9055655 30 1.4
06_01_0874 - 6702059-6702733,6703146-6703521,6703677-6703770,670... 29 2.4
06_03_1122 - 27775141-27775333,27775414-27775604,27775907-277770... 29 3.2
04_01_0335 + 4409387-4410156,4410598-4410706 29 3.2
12_01_0466 + 3649500-3649635,3649925-3650520 28 4.3
08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947 28 5.6
06_03_0547 + 22001831-22002304 28 5.6
04_03_0271 - 13694669-13694770,13694859-13694999,13695258-136953... 28 5.6
04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903 28 5.6
03_01_0397 + 3086142-3086489,3087097-3087252,3088043-3088201,308... 28 5.6
01_01_0603 + 4492430-4492804 28 5.6
01_01_0131 - 1186129-1186242,1186640-1186720,1186843-1186993,118... 28 5.6
09_06_0291 - 22066550-22067610,22067721-22067975,22068093-220682... 27 7.5
09_04_0588 - 18789971-18790000,18790334-18790507,18791470-187919... 27 7.5
09_04_0013 - 13726386-13726848,13726932-13727140,13727223-137273... 27 7.5
07_01_0014 - 103808-103873,103925-104248 27 7.5
06_01_1154 + 9753880-9753927,9754135-9754695 27 7.5
04_03_0969 + 21331989-21332674,21333090-21333194,21333269-213333... 27 7.5
03_05_0994 + 29541109-29542527 27 7.5
01_06_0163 - 27124246-27124335,27124454-27124663,27124746-271248... 27 7.5
07_03_0332 + 16880184-16881017,16881334-16881462,16882685-168827... 27 9.9
06_03_0756 + 24244313-24244999 27 9.9
04_04_0809 - 28236216-28236679,28236776-28236899,28237049-282371... 27 9.9
04_03_0294 + 14010150-14010491,14010593-14010775 27 9.9
03_01_0129 - 1005010-1005042,1005227-1005413,1005516-1005763,100... 27 9.9
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 27 9.9
>06_03_1001 +
26817231-26818246,26818341-26818525,26818614-26818917,
26819956-26820041,26820141-26820298,26820420-26820496,
26820586-26820652
Length = 630
Score = 35.9 bits (79), Expect = 0.021
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = -1
Query: 376 RFPGSGYPYTRQRKTSGLPISPVITSFCSPAMPTGVLTGSFTCR-WISCWLMPNSFSAM- 203
+FP SG PY RK G P + P PT V+T W PN++S++
Sbjct: 433 KFPVSGSPYVAPRKKGGGADVPGLAEAAHPMPPTSVMTRLILIMVWRKLIRNPNTYSSLI 492
Query: 202 -QM*TPVSFRYSDTISSVPSDSTRV 131
+ + VSFR++ + S+ S +
Sbjct: 493 GLVWSLVSFRWNIQMPSIIKGSISI 517
>10_08_0950 + 21764902-21765912
Length = 336
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 230 PAGDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIPRP 367
P+ + E + DAGR R +NGG G R +P+ +P
Sbjct: 182 PSSEEDEEEEAAADAGRSRSLHGLISNGGSGSGLRFTIPKASRSKP 227
>04_01_0450 -
5840015-5840055,5840635-5840977,5841326-5841537,
5842381-5842477
Length = 230
Score = 30.7 bits (66), Expect = 0.80
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +2
Query: 254 ERSGE-DAGRHRGRTKRSNNGGD 319
ERSGE DAGR GR RS GGD
Sbjct: 2 ERSGEGDAGRGDGRRLRSGQGGD 24
>11_01_0574 + 4582098-4582331,4582450-4582492,4582683-4582757,
4584344-4584465,4584547-4584654,4585975-4586119,
4586786-4586869,4586997-4587345,4587527-4587666,
4587784-4588037,4588409-4588576,4588686-4588976,
4589329-4589538,4589778-4589860,4590288-4590414,
4593624-4595516,4596274-4596395,4596487-4596628,
4596719-4596940,4597489-4597563,4598351-4598452,
4598616-4598819
Length = 1730
Score = 30.3 bits (65), Expect = 1.1
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Frame = +3
Query: 90 WRKGEITIDGSEGRTRVLSDGTLEIVSLYRNDTGVYICIAENEFGISQQEIHLQVNDPVR 269
WR G+++ +G E +L G IV L D + ++ +S +I + VN PV
Sbjct: 1009 WRGGQVSEEGLEW---LLLKGFKTIVDLREEDVKDDLYLSAIHEAVSLGKIEV-VNLPVE 1064
Query: 270 TPVGIAGEQ----NEVITGEMGRPLVLRCLVYGYPDPGNLLVQRT*RSHGAIQQYIVRSQ 437
+ EQ E+++ +P +Y + G + RT +QY+ R++
Sbjct: 1065 IGTAPSAEQVQRFAEIVSDSAKKP------IYLHSQEG---ISRTSAMVSRWKQYVTRAE 1115
Query: 438 RKRSXNKTTDRRGARGIXVSSIQRKRKPGHVTDG 539
R + N++ + G + Q PG ++G
Sbjct: 1116 RLATQNRSLNGNGKHVRNDQTEQLTNSPGFSSEG 1149
>12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110
Length = 530
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 102 EITIDGSEGRTRVLSDGTLEIVSLYRNDTG 191
E+ IDG EG T L+D L+ + +Y N G
Sbjct: 280 ELAIDGVEGSTFRLADTRLQTLRMYENQVG 309
>03_02_0517 + 9054816-9055655
Length = 279
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 63 HGNPPPKITWRKGEITIDGSEGRTR 137
+G P ++TW +G+ +DG EGR R
Sbjct: 229 NGVGPRRVTWPEGDGHVDGGEGRIR 253
>06_01_0874 -
6702059-6702733,6703146-6703521,6703677-6703770,
6705455-6705833
Length = 507
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 193 TPVSFRYSDTISSVPSDS-TRVRPSLPSIVISPFLQVILG 77
+PV F DT+ + PS+S T R SL + +S ++LG
Sbjct: 276 SPVLFEIQDTVRTPPSESKTMKRASLYGLAMSAVFYLVLG 315
>06_03_1122 -
27775141-27775333,27775414-27775604,27775907-27777099,
27777206-27777353,27777534-27777609,27777696-27777818,
27777886-27778050,27778169-27778259,27778580-27778664,
27778745-27778900,27778992-27779048,27779138-27779236,
27779381-27779499,27780145-27780202
Length = 917
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 318 SPPLLLRFVLPRCRPASSPDRSLAGGSPA 232
S P+ L+ VLP +P S PD S++ SP+
Sbjct: 588 SSPMTLQTVLPFSQPQSYPDTSMSSLSPS 616
>04_01_0335 + 4409387-4410156,4410598-4410706
Length = 292
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 233 AGDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLAL 343
AGD PA+E G DA + +TK + +G+ + AL
Sbjct: 39 AGDRPAAETKGLDASQEGDQTKGLDGSQEGRGSESAL 75
>12_01_0466 + 3649500-3649635,3649925-3650520
Length = 243
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 251 SERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIPRPRKSSG 382
SE G + R RGR R G R ALP + + R R SG
Sbjct: 7 SEDGGGEVARSRGRRTRGGAGRWRWVERDALPPLAVSRCRLESG 50
>08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947
Length = 660
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 254 ERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIPRP 367
E S + R +R GG G+ A A P V +P P
Sbjct: 258 ESSDVQSSASPSRRRRRKGGGGGEEAEAASPSVSVPLP 295
>06_03_0547 + 22001831-22002304
Length = 157
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 239 DPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIP 361
DPP + R RGRT S TARL++PR P
Sbjct: 114 DPPVGRWKSRRSPRRRGRTSAS-----AVTARLSIPRTENP 149
>04_03_0271 -
13694669-13694770,13694859-13694999,13695258-13695370,
13696253-13696304,13696538-13696660,13696985-13697091,
13697280-13697329,13698284-13698387,13698610-13698690,
13698829-13698913,13699370-13699446,13700587-13700676,
13701338-13701397,13701768-13701872,13701986-13702035,
13702174-13702280,13704735-13704805,13704916-13705144,
13705228-13705704,13705807-13706405
Length = 940
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 227 QPAGDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRV 352
Q A P A +G D+G G K S +GG G+ + +LPRV
Sbjct: 49 QQAWRPVAPATAGRDSGG-TGSGKSSVDGGVGRASHDSLPRV 89
>04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903
Length = 405
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 233 AGDPPASERSGEDAGRHRGRTKRSNNGGDGQT 328
AG A R+ HR R +R NG DG++
Sbjct: 115 AGQNSAGGRASSSRQPHRSRRERDGNGSDGKS 146
>03_01_0397 +
3086142-3086489,3087097-3087252,3088043-3088201,
3088305-3088388,3089266-3089348,3089486-3089531,
3089825-3089912,3090009-3090178,3090317-3090430,
3090497-3090604,3090987-3091202
Length = 523
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 227 QPAGDPPASERSGEDAGRHRGRTKRSNNGGDGQTA 331
+ AGD A+E +G+ RG+ K+ NGG A
Sbjct: 14 EEAGDKAAAEEAGDGFQVVRGKKKKRPNGGSASGA 48
>01_01_0603 + 4492430-4492804
Length = 124
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 340 AASCTDTPTPEIFWYRGLNGPMVPYSSTLYEARENVLXIRQL 465
AAS D P+ E+ YR GP+ + S L R + L +R +
Sbjct: 21 AASPRDDPSVEVRLYRRGAGPVAVFRSALVGPRRDRLQVRAI 62
>01_01_0131 -
1186129-1186242,1186640-1186720,1186843-1186993,
1187100-1187167,1187323-1187438,1188108-1188366
Length = 262
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 227 QPAGDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIPRPRKSSGTEDL 394
+P+G S G DAGR + GGDG L R R + G +DL
Sbjct: 11 RPSGIACGSAADGVDAGRGNQEAGGRSAGGDGGDRLLLRRRRRWRLGEEDGGVQDL 66
>09_06_0291 -
22066550-22067610,22067721-22067975,22068093-22068207,
22068329-22068381,22068467-22068724,22069110-22069160,
22069577-22069822,22070427-22070652,22070984-22071100
Length = 793
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 477 RLVDQLSYXKNVFS-GFVQCTAVWHHGTVK 391
R +DQ + VF+ GF+ VWH+GT+K
Sbjct: 490 RKIDQGGWVPLVFAAGFMIIMYVWHYGTLK 519
>09_04_0588 -
18789971-18790000,18790334-18790507,18791470-18791954,
18792912-18793266
Length = 347
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 242 PPASERSGED----AGRHRGRTKRSNNGGDGQTARLALPRVRIPR 364
PP+S ++ +G+H+ R + GGDG+ + P R+ R
Sbjct: 15 PPSSSSDQQEQYYCSGQHQQRGEDGGGGGDGEMVHFSHPEHRLAR 59
>09_04_0013 -
13726386-13726848,13726932-13727140,13727223-13727323,
13727515-13727740
Length = 332
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 72 PPPKITWRKGEITIDGSEGRTRVLSDGTLEIVSLYRNDTGVYICIAENE-FGISQQEIHL 248
PPP + +G + EG TR+ DG L ++ R+ V + + E+ G + Q++ L
Sbjct: 30 PPPPLRLVRGARRVAFDEGYTRMFGDGNLAVL---RDGRRVRLTLDESTGAGFASQDVFL 86
>07_01_0014 - 103808-103873,103925-104248
Length = 129
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 75 PPKITWRKGEITIDGSEGRT 134
PP+I WR G T+ EGRT
Sbjct: 72 PPQIRWRGGASTVVRPEGRT 91
>06_01_1154 + 9753880-9753927,9754135-9754695
Length = 202
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 227 QPAGDPPASERSGEDAGRHRGRTKRSNNGGDGQ 325
QP G+ ER+ + G T+R NNGGD Q
Sbjct: 87 QPHGED--EERAAKGEALTMGTTQRGNNGGDRQ 117
>04_03_0969 +
21331989-21332674,21333090-21333194,21333269-21333391,
21333458-21333628,21333710-21333839,21333926-21334135,
21334700-21334855
Length = 526
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 227 QPAGDPPASERSGEDAGR-HRGRTKRSNNGGDGQTARLALPRV 352
QP PP +RSG + R G ++ GG G A +P V
Sbjct: 132 QPPQPPPYHQRSGGPSSRGGSGESRGGGGGGGGGGAEPGVPEV 174
>03_05_0994 + 29541109-29542527
Length = 472
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 233 AGDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALP 346
A D ER E AG+ RGR RSN + R+A+P
Sbjct: 278 AVDTSLDERESEMAGKGRGRATRSN----ARKCRMAVP 311
>01_06_0163 -
27124246-27124335,27124454-27124663,27124746-27124875,
27124973-27125143,27125268-27125387,27125642-27125746,
27125819-27126471
Length = 492
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 471 VDQLSYXKNV-FSGFVQCTAVWHHGTVKSSVPEDFRGRGIRTRGSARRAVCPSPPLL 304
V L+ ++V F QC++V++ SS ED+ G +GS+ + PL+
Sbjct: 102 VSHLAESRSVDVDAFSQCSSVYNIEKAGSSYSEDYSSSGPGRKGSSSYGYASASPLV 158
>07_03_0332 +
16880184-16881017,16881334-16881462,16882685-16882750,
16883159-16883224,16884419-16884457,16884858-16885028
Length = 434
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 236 GDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRI 358
G ++ E+A G TK+S + T+ L +P+V++
Sbjct: 287 GGKEGKKKRSEEAAGSEGSTKKSKHEATSPTSSLKVPKVKL 327
>06_03_0756 + 24244313-24244999
Length = 228
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 248 ASERSGEDAGRHRGRTKRSNNGG-DGQ 325
+S+ GE A HR RT+R GG DG+
Sbjct: 187 SSDDEGEGARMHRRRTERRRRGGADGE 213
>04_04_0809 -
28236216-28236679,28236776-28236899,28237049-28237191,
28237697-28237832,28238413-28238888,28238940-28239024
Length = 475
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 242 PPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVR 355
P RSG H + R +G DG + PRVR
Sbjct: 438 PRVPTRSGGHGHHHHHHSSRPRSGSDGARSGYPSPRVR 475
>04_03_0294 + 14010150-14010491,14010593-14010775
Length = 174
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 236 GDPPASERSGEDAGRHRGRTKRSNNGGD 319
G PP SG AG G +NNGG+
Sbjct: 16 GAPPTGAGSGAGAGAPGGAVNDNNNGGN 43
>03_01_0129 -
1005010-1005042,1005227-1005413,1005516-1005763,
1006224-1006406
Length = 216
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 233 AGDPPASERSGEDAGRHRGRTKRSNNGGDGQTARLALPRVRIPRPRKSSGTEDLTVP 403
A PP +R + + ++G+ ++ GG G P+ + + + GT LTVP
Sbjct: 8 AAPPPQQQRRNKSSAANKGKKGGASGGGGGGRWPPVKPKKDL-QVNRLKGTHLLTVP 63
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 393 KSSVPEDFRGRGIRTRGSARRAVCPSPPLL 304
K+ + G G+RT GS+ PSPP +
Sbjct: 521 KTEAGKSAAGEGVRTTGSSNPTPPPSPPFI 550
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,884,877
Number of Sequences: 37544
Number of extensions: 405956
Number of successful extensions: 1713
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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