Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2090
(472 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 137 1e-31
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 104 1e-21
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 101 6e-21
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 88 8e-17
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 88 8e-17
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 81 2e-14
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 80 3e-14
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 75 6e-13
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 73 3e-12
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 71 1e-11
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 71 1e-11
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 65 8e-10
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 62 5e-09
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 62 8e-09
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 61 1e-08
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 60 2e-08
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 59 4e-08
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 59 6e-08
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 54 2e-06
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 51 1e-05
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 51 1e-05
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 48 1e-04
UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, wh... 47 2e-04
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 46 3e-04
UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1; Tetr... 46 4e-04
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 45 0.001
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 41 0.016
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 41 0.016
UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10; Archa... 38 0.084
UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5; Archae... 38 0.15
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 34 1.8
UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1; Guill... 33 2.4
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic... 33 3.2
UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;... 33 3.2
UniRef50_P10623 Cluster: 50S ribosomal protein L12P; n=7; Archae... 33 3.2
UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal ... 33 4.2
UniRef50_A6RK49 Cluster: Putative uncharacterized protein; n=1; ... 32 5.5
UniRef50_Q9P9G5 Cluster: Ribosomal protein L12; n=9; Archaea|Rep... 32 5.5
UniRef50_Q8UDY7 Cluster: Cyclopropane-fatty-acyl-phospholipid sy... 32 7.3
UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella pneu... 31 9.7
UniRef50_Q5A0A7 Cluster: Putative uncharacterized protein; n=2; ... 31 9.7
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 137 bits (331), Expect = 1e-31
Identities = 65/74 (87%), Positives = 71/74 (95%)
Frame = +1
Query: 22 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 201
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 202 TNIGSGVGAAPAAG 243
TNIGSGVGAAPA G
Sbjct: 61 TNIGSGVGAAPAGG 74
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 104 bits (249), Expect = 1e-21
Identities = 57/81 (70%), Positives = 64/81 (79%), Gaps = 4/81 (4%)
Frame = +1
Query: 10 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 189
S++K+ + A +C YSALIL DDDVAVT EKISTI A VD+EPYWPGLF KALEGINV
Sbjct: 9 SQVKITAIA--SCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGINV 64
Query: 190 RDLITNIGSGV----GAAPAA 240
+DLITNIGSGV GAAP A
Sbjct: 65 KDLITNIGSGVETGGGAAPTA 85
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 101 bits (243), Expect = 6e-21
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +1
Query: 22 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 201
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 202 TNIGSGVGAAPAAG 243
N+G+G G APAAG
Sbjct: 61 CNVGAG-GPAPAAG 73
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 88.2 bits (209), Expect = 8e-17
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = +1
Query: 49 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 216
VYSALILVDD VAVT EKISTILKAA +VEPYW LFAKALEGINV+DLITNIGS
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAA--NVEPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 88.2 bits (209), Expect = 8e-17
Identities = 42/77 (54%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = +1
Query: 25 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDLI 201
+S AELA Y+ALIL D+ + +T +K+ ++ AA V ++EP W LFAKALEG +V+DL+
Sbjct: 1 MSAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLL 60
Query: 202 TNIGSGVGAAPAAGWSA 252
N+GSG GAAPAAG +A
Sbjct: 61 LNVGSGGGAAPAAGGAA 77
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 80.6 bits (190), Expect = 2e-14
Identities = 40/70 (57%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = +1
Query: 25 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVD-VEPYWPGLFAKALEGINVRDLI 201
+SK+ELACVY+AL+L DDD+ VT +KI+TILKAA + VE Y P LFA +L G NV+DL+
Sbjct: 1 MSKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLL 60
Query: 202 TNIGSGVGAA 231
++GS +A
Sbjct: 61 MSMGSPAPSA 70
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 79.8 bits (188), Expect = 3e-14
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +1
Query: 25 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 204
+S +ELAC Y+ALIL DD + +T E IS ++K A V+VE YWP LFAK E N+ DLI
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
Query: 205 NIGSG 219
N+G+G
Sbjct: 61 NVGAG 65
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 75.4 bits (177), Expect = 6e-13
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = +1
Query: 10 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 189
S+L + EL CVYS+L+L DD + VT + I ++KAA D++P+ P LFA+AL+G ++
Sbjct: 7 SELTKEQREELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDL 66
Query: 190 RDLITNIGSGVGAAPAA 240
L++ +GSG AAPAA
Sbjct: 67 GSLLSAVGSGAAAAPAA 83
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 72.9 bits (171), Expect = 3e-12
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = +1
Query: 1 LARSKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 180
++ ++L EL C Y+AL+L D V VT E I I+ AA VEPY+PGLFA+AL
Sbjct: 4 VSMNELPQSQVQELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALST 63
Query: 181 INVRDLITNIGSGVGAAPAAG 243
NV D++ G+ A P AG
Sbjct: 64 TNVSDIVAGCGAASVAVPVAG 84
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/43 (81%), Positives = 37/43 (86%), Gaps = 4/43 (9%)
Frame = +1
Query: 124 AAVDVEPYWPGLFAKALEGINVRDLITNIGSGV----GAAPAA 240
A VD+EPYWP LFAKALEGINV+DLITNIGSGV GAAPAA
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGVGTGGGAAPAA 48
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 71.3 bits (167), Expect = 1e-11
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 22 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDL 198
M + E A Y+ALIL DD +T EK+ +L AA + DVEP W LFAKALEG +V+D+
Sbjct: 1 MPTDPERAVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDI 60
Query: 199 ITNIGSGVGAAPAAG 243
+T + S G A G
Sbjct: 61 LTEVASAAGGVVAGG 75
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 64.9 bits (151), Expect = 8e-10
Identities = 29/70 (41%), Positives = 45/70 (64%)
Frame = +1
Query: 34 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG 213
AELACVY+ALIL D + + + ++ ++ A+ + ++ +W L+A + NV DLI N+
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLIKNVS 62
Query: 214 SGVGAAPAAG 243
G AAPAAG
Sbjct: 63 LGGAAAPAAG 72
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 62.5 bits (145), Expect = 5e-09
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +1
Query: 10 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 189
++L K EL C Y+ALIL ++ +++T E I ++K + V PY P LF KAL+G ++
Sbjct: 7 AELPECEKQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDI 66
Query: 190 RDLITNIGSGVGAAPAA 240
L++N+ G G APAA
Sbjct: 67 EGLLSNLSVG-GGAPAA 82
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 61.7 bits (143), Expect = 8e-09
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +1
Query: 37 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGI 183
+ C+YSA IL +D V V +KI+T +KAA ++VEP+WPGLFAK+L +
Sbjct: 19 KFTCIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 60.9 bits (141), Expect = 1e-08
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +1
Query: 34 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI-TNI 210
+E AC Y+ALIL +D+ + K++ I+KAA + VEP W +F KAL+G V DL+ N
Sbjct: 17 SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNS 76
Query: 211 GSGVGAAPAA 240
GS A AA
Sbjct: 77 GSAPAAQAAA 86
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = +1
Query: 37 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 216
E A Y+ALIL D +V +T EK+ ++ A V+VE W LFAKALEG ++++ N +
Sbjct: 4 ESALSYAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSA 63
Query: 217 GVGAAPAAG 243
AA A G
Sbjct: 64 APAAAAAGG 72
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 59.3 bits (137), Expect = 4e-08
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = +1
Query: 37 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 216
E ACV +A+IL D++ T + +I AA V V+ W LFA LEG NV++L+T +GS
Sbjct: 5 ETACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
Query: 217 GVGAAPA 237
AAPA
Sbjct: 65 -ASAAPA 70
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 58.8 bits (136), Expect = 6e-08
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +1
Query: 37 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 216
ELA +AL++ + +T E I+T+L A + VE +WP + AKAL N+ DLI + GS
Sbjct: 9 ELAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
Query: 217 G-VGAAPAA 240
V AAPAA
Sbjct: 69 APVAAAPAA 77
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 54.0 bits (124), Expect = 2e-06
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +1
Query: 22 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 201
M SK +LAC Y+ALIL D + + + KAA VDV FA L+ +++ D++
Sbjct: 1 MSSKQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDVL 59
Query: 202 TNIGSGVGAAPAAG 243
+ + G G APAAG
Sbjct: 60 SKVSFG-GVAPAAG 72
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 51.2 bits (117), Expect = 1e-05
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +1
Query: 52 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT---NIGSGV 222
++A IL D + +T + + TI KAA +V+ W ++AKALEG +++++++ N G
Sbjct: 8 FAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFHNAGPVA 67
Query: 223 GAAPAAGWSA 252
GA A+G +A
Sbjct: 68 GAGAASGAAA 77
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 50.8 bits (116), Expect = 1e-05
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +1
Query: 31 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 210
K ELA +Y +IL + +T E I+ +L A+ ++V PYWP +FA+ ++G + ++ +
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKGKDFDKIMEDS 178
Query: 211 GS--GVGAAPAAG 243
G G AAG
Sbjct: 179 AGAPGAGGGAAAG 191
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Frame = +1
Query: 40 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI------ 201
LAC Y+AL+L D + + E I+ +KAA V V P P +FA+ LE +V L+
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALMAAAATQ 65
Query: 202 TNIGSGVGAAPAAG 243
+ AAPAAG
Sbjct: 66 APTATSAAAAPAAG 79
>UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_25,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 151
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/75 (30%), Positives = 42/75 (56%)
Frame = +1
Query: 16 LKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRD 195
+ ++++ A Y+AL+L + +T + + + K A V+V F KA EG ++
Sbjct: 43 INIMAQQPQAVAYAALLLAGSNTPLTADNVEKLTKKAGVNVPKQLAAAFVKAFEGKDILS 102
Query: 196 LITNIGSGVGAAPAA 240
L++ +G G G+APAA
Sbjct: 103 LLS-VGGGQGSAPAA 116
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 46.4 bits (105), Expect = 3e-04
Identities = 25/72 (34%), Positives = 40/72 (55%)
Frame = +1
Query: 25 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 204
+S LAC Y+AL+L D + + E I+ +KAA V++ P P +FA+ LE +V L+
Sbjct: 1 MSAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLMA 60
Query: 205 NIGSGVGAAPAA 240
+ A +A
Sbjct: 61 AAAAQAPTAASA 72
>UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 271
Score = 46.0 bits (104), Expect = 4e-04
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 43 ACVYSALILVDDDVAVTGEKISTIL-KAAAVDVEPYWPGLFAKALEGINVRDLITNIG-S 216
AC Y+ L+L DD A+T + I+ +L KA +VE Y P L+ + + I N G S
Sbjct: 8 ACTYAVLLLSDDGQAITVDNINKVLTKAKVQNVEKYLPKLYVSNITPAVIASTIANGGSS 67
Query: 217 GVGAAPAA 240
G+APAA
Sbjct: 68 SSGSAPAA 75
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 44.8 bits (101), Expect = 0.001
Identities = 26/72 (36%), Positives = 38/72 (52%)
Frame = +1
Query: 25 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 204
++ A+LAC Y+ALIL + I + KAA V+V FA AL +NV +++
Sbjct: 1 MTTAQLACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVLG 59
Query: 205 NIGSGVGAAPAA 240
+I G AA A
Sbjct: 60 SISFGGAAAGGA 71
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 40.7 bits (91), Expect = 0.016
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 37 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 150
ELACVY+ALIL D D +T + + I+ A+ + + +W
Sbjct: 4 ELACVYAALILHDGDKEITADALQKIIDASGLQTDKFW 41
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 40.7 bits (91), Expect = 0.016
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 49 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITN--IGSGV 222
VY+AL+L +T + + +L+AA V+V+ ALEG+N+ + I + V
Sbjct: 4 VYAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAIQKAAMPMAV 63
Query: 223 GAAPAAGWSA 252
AAPAA +A
Sbjct: 64 AAAPAAAAAA 73
>UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10;
Archaea|Rep: 50S ribosomal protein L12P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 115
Score = 38.3 bits (85), Expect = 0.084
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +1
Query: 49 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI------ 210
VY+ALIL + D + + ++ +L AA VDVE ALE +++ + +
Sbjct: 4 VYAALILNEADEEINEDNLTDVLDAAGVDVEESRVKALVAALEDVDIEEAVDQAAAAPVP 63
Query: 211 GSGVGAAPAAG 243
SG AAPA G
Sbjct: 64 ASGGAAAPAEG 74
>UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5;
Archaea|Rep: 50S ribosomal protein L12P - Pyrococcus
horikoshii
Length = 108
Score = 37.5 bits (83), Expect = 0.15
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 49 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS--GV 222
VY+AL+L + E + +L+AA V+ E ALEG+N+ ++I V
Sbjct: 4 VYAALLLHSVGKEINEENLKAVLQAAGVEPEEARIKALVAALEGVNIDEVIEKAAMPVAV 63
Query: 223 GAAPAA 240
AAPAA
Sbjct: 64 AAAPAA 69
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 33.9 bits (74), Expect = 1.8
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 100 KISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 243
KI IL++ +++E ALEG +V +LIT + A PAAG
Sbjct: 21 KIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAVPAAG 68
>UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1;
Guillardia theta|Rep: Acidic ribosomal protein P1 -
Guillardia theta (Cryptomonas phi)
Length = 104
Score = 33.5 bits (73), Expect = 2.4
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +1
Query: 40 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRD 195
++C+ S LIL ++ + +T + IS +LK + +VE Y+ F + ++ ++
Sbjct: 10 ISCILSILILKENKIKITKDLISLVLKTSNNNVEDYFLSYFERISASLDEKE 61
>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4 - Mus musculus
Length = 88
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 22 MVSKAELACVYSALILVDDD 81
M S +ELAC+YSALIL +DD
Sbjct: 1 MASASELACIYSALILHEDD 20
>UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;
n=16; Burkholderiaceae|Rep: Transcriptional regulator,
AraC family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 352
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 64 ILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 210
+L + VT E+ ST+ + A+D++ PG+F++ L G ++ L ++
Sbjct: 58 LLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRGGTLKYLCLSL 106
>UniRef50_P10623 Cluster: 50S ribosomal protein L12P; n=7;
Archaea|Rep: 50S ribosomal protein L12P - Methanococcus
vannielii
Length = 99
Score = 33.1 bits (72), Expect = 3.2
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 49 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITN--IGSGV 222
+Y+AL+L + VT E + +L A ++ ALEG+++ + I I
Sbjct: 4 IYAALLLNSANKEVTEEAVKAVLVAGGIEANDARVKALVAALEGVDIAEAIAKAAIAPVA 63
Query: 223 GAAPAAGWSA 252
AAP A +A
Sbjct: 64 AAAPVAAAAA 73
>UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal
protein P1; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein P1 - Equus caballus
Length = 125
Score = 32.7 bits (71), Expect = 4.2
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 40 LACVYSALILVDDDVAVT 93
LAC+YSALIL DD+V VT
Sbjct: 43 LACIYSALILHDDEVTVT 60
>UniRef50_A6RK49 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 410
Score = 32.3 bits (70), Expect = 5.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 165 GEQTWPIWLYIYSRRFQDGGNFLTSYGNIIIHQDESR 55
G QT P W + YS + GG S+G ++H D ++
Sbjct: 67 GSQTSPTWTHPYSLAWSKGGGATKSWGMTLVHIDANQ 103
>UniRef50_Q9P9G5 Cluster: Ribosomal protein L12; n=9; Archaea|Rep:
Ribosomal protein L12 - Methanococcoides burtonii
Length = 100
Score = 32.3 bits (70), Expect = 5.5
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +1
Query: 49 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGA 228
+Y+AL+L + +T E +S +L AA +V ALE +++ + + A
Sbjct: 4 IYAALLLHNAGKDITEESVSAVLSAAGTEVNESRAKALVAALEDVDIEEAMATAAFAPAA 63
Query: 229 APAA 240
A A
Sbjct: 64 AVVA 67
>UniRef50_Q8UDY7 Cluster: Cyclopropane-fatty-acyl-phospholipid
synthase; n=1; Agrobacterium tumefaciens str. C58|Rep:
Cyclopropane-fatty-acyl-phospholipid synthase -
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Length = 410
Score = 31.9 bits (69), Expect = 7.3
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 201 DQVTDIDAFQGFGEQTWPIWLYIYSRRFQDGGNFLTSYGNIIIHQDESRVNT 46
D + ++ F+ GE WP + + R + GG + II DESR +T
Sbjct: 261 DNIVSVEMFEAVGESYWPSYFEMLKRCLKPGGRAVLQ----IISIDESRFDT 308
>UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella
pneumophila|Rep: Expressed protein - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 509
Score = 31.5 bits (68), Expect = 9.7
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +1
Query: 28 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 150
S +L Y +L + ++TG+++ + ++A +++EPYW
Sbjct: 386 SSPKLEFCYKTQLLKLETCSITGKELQSAVQATLINLEPYW 426
>UniRef50_Q5A0A7 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 116
Score = 31.5 bits (68), Expect = 9.7
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -3
Query: 194 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMRA 57
S +PS ALA Q ST AA M FS V + S+S +++A
Sbjct: 47 SLKFLPSTALAKTSAQTWSTLAPAALVMANNFSEVISCSASAKIKA 92
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,625,237
Number of Sequences: 1657284
Number of extensions: 6591875
Number of successful extensions: 20084
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 19624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20068
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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