Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2083
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 192 2e-49
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 192 2e-49
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 192 2e-49
03_01_0034 + 318432-318825,318902-319851 191 5e-49
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 190 8e-49
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 190 8e-49
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 190 8e-49
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 188 3e-48
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 108 4e-24
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 104 5e-23
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 104 5e-23
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 104 5e-23
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 73 3e-13
12_02_1233 + 27224219-27225607 29 2.4
02_01_0302 - 2021221-2023305 29 4.2
11_01_0191 + 1508509-1508749,1508852-1509204,1509860-1510002,151... 28 7.4
10_08_1037 - 22477358-22478752 27 9.8
06_03_1260 + 28805490-28805706,28807167-28807387 27 9.8
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 192 bits (469), Expect = 2e-49
Identities = 97/167 (58%), Positives = 111/167 (66%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+TPT+GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYRALTVPELTQQM+DA NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + L + + E IPNN
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNN 348
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLATP 220
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 192 bits (469), Expect = 2e-49
Identities = 97/167 (58%), Positives = 111/167 (66%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+TPT+GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYRALTVPELTQQM+DA NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + L + + E IPNN
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNN 348
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLATP 220
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 192 bits (469), Expect = 2e-49
Identities = 97/167 (58%), Positives = 111/167 (66%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+TPT+GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYRALTVPELTQQM+DA NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + L + + E IPNN
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNN 348
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLATP 220
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 191 bits (465), Expect = 5e-49
Identities = 96/167 (57%), Positives = 111/167 (66%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+TP++GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYRALTVPELTQQM+DA NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + L + + E IPNN
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNN 348
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTP 220
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 190 bits (463), Expect = 8e-49
Identities = 95/167 (56%), Positives = 111/167 (66%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+TP++GDLNHL+S TMSGVT CLR
Sbjct: 362 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 421
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYRALTVPELTQQM+DA NMM
Sbjct: 422 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 481
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + + + + E IPNN
Sbjct: 482 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNN 528
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 314 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 372
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 373 VENADECMVLDNEALYDICFRTLKLTTP 400
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 190 bits (463), Expect = 8e-49
Identities = 95/167 (56%), Positives = 111/167 (66%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+TP++GDLNHL+S TMSGVT CLR
Sbjct: 203 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 262
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYRALTVPELTQQM+DA NMM
Sbjct: 263 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 322
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + + + + E IPNN
Sbjct: 323 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNN 369
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 155 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 213
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 214 VENADECMVLDNEALYDICFRTLKLTTP 241
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 190 bits (463), Expect = 8e-49
Identities = 95/167 (56%), Positives = 111/167 (66%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+TP++GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYRALTVPELTQQM+DA NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + + + + E IPNN
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNN 348
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTP 220
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 188 bits (458), Expect = 3e-48
Identities = 94/167 (56%), Positives = 110/167 (65%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+ P++GDLNHL+S TMSGVT CLR
Sbjct: 198 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCLR 257
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYRALTVPELTQQM+DA NMM
Sbjct: 258 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 317
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + + + + E IPNN
Sbjct: 318 AADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNN 364
Score = 84.6 bits (200), Expect = 6e-17
Identities = 47/88 (53%), Positives = 53/88 (60%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 150 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 208
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL +P
Sbjct: 209 VENADECMVLDNEALYDICFRTLKLTNP 236
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 108 bits (259), Expect = 4e-24
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG G+ V +++ P Q PYN+ LS H L+ +H
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLL-EHTDVA 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+ +I + S + PTY +LN L+S +S +TT LRF G +N D+ + N+VP
Sbjct: 202 VLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+VPE+T +F+ +MMA CDP HG+Y+
Sbjct: 262 YPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYM 313
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 104 bits (250), Expect = 5e-23
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG G+ V +++ P Q PYN+ LS H L+ +H
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLL-EHTDVA 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+ +I + S + PTY +LN LVS +S +T LRF G LN D+ + N+VP
Sbjct: 202 VLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ +MMA CDP HG+Y+
Sbjct: 262 YPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYM 313
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 104 bits (250), Expect = 5e-23
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG G+ V +++ P Q PYN+ LS H L+ +H
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLL-EHTDVA 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+ +I + S + PTY +LN LVS +S +T LRF G LN D+ + N+VP
Sbjct: 202 VLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ +MMA CDP HG+Y+
Sbjct: 262 YPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYM 313
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 104 bits (250), Expect = 5e-23
Identities = 48/131 (36%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCL 326
PYN+ LS H L+ +H ++ +I + S + PTY +LN L+S +S +TT L
Sbjct: 265 PYNSVLSTHSLI-EHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTTSL 323
Query: 327 RFPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMM 506
RF G +N D+ + N+VP+PR+H + +AP+ S + +VPE+T +F+ ++M
Sbjct: 324 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVM 383
Query: 507 AXCDPGHGRYL 539
A CDP HG+Y+
Sbjct: 384 AKCDPRHGKYM 394
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +1
Query: 127 KVSDTVVDHTMRLSQFTS*FENTDETYCIDNEALYDICFRTLNCPHPPTVTL 282
K+S VV+ + S E+TD +DNEA+YDIC R+L+ P L
Sbjct: 257 KISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNL 308
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 72.5 bits (170), Expect = 3e-13
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +3
Query: 147 RPYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCL 326
+PYN+ L++ +L ++ R + L+ PT+ N LVS MS TT L
Sbjct: 184 QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTL 243
Query: 327 RFPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLT-SRGSRQYRALTVPELTQQMFDAXNM 503
R+PG +N DL L +++P PR H M G+ PLT R R TV ++ +++ N+
Sbjct: 244 RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNI 303
Query: 504 M 506
M
Sbjct: 304 M 304
>12_02_1233 + 27224219-27225607
Length = 462
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Frame = -1
Query: 449 VLSASTGCEGSE-TWHEXVETREGNHVYGQFXEISVQLTGEPKASGDTR-------HCEG 294
V S+ T EGS W E REGN G E+ EP + HC+
Sbjct: 179 VFSSRTEPEGSTWRWEERSFVREGNATMGTIDEVCSSSGWEPFDTYSVYFRGSLYVHCQN 238
Query: 293 N*VVKVTV 270
N V+++T+
Sbjct: 239 NCVIRITI 246
>02_01_0302 - 2021221-2023305
Length = 694
Score = 28.7 bits (61), Expect = 4.2
Identities = 36/112 (32%), Positives = 44/112 (39%), Gaps = 12/112 (10%)
Frame = +1
Query: 259 PHPPTVTLTT*FPSQCLVSPLALGS--------PVS*TLISXNWP*----TWFPSRVSTX 402
P PP+ + T +PS P GS P S T S + P + PS S
Sbjct: 415 PQPPSSSPTPSYPSPSSSYPAPPGSNTPSYPSPPSSATTPSSHSPPGGSSSTTPSYPSPN 474
Query: 403 SCQVSLPSHPVEADSTVP*LYPSSRNRCSTPXT*WPXVTRATGXTLPSXHXP 558
+ S PSHP ST P YPS + +TP P G T PS P
Sbjct: 475 GGKPSTPSHPSPPGSTTP-SYPSPPSSSTTPSYHSP----PQGHTTPSHPSP 521
>11_01_0191 +
1508509-1508749,1508852-1509204,1509860-1510002,
1510195-1510256,1510406-1510479,1510812-1510864,
1511072-1513550
Length = 1134
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 126 QSIRHCRRPYNATLSVHQLV*KHRRNLLHRQRGSIRHLL 242
+ + H RRP+ +++ +L+ KH +GS +H+L
Sbjct: 142 ERLSHFRRPFGMEVNLRELILKHLGIFYISTKGSTQHVL 180
>10_08_1037 - 22477358-22478752
Length = 464
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 117 PLAQSIRHCRRPYNATLSVHQLV*KHRRNLLHRQ-RGSIRHLLP 245
P A ++ C RP A +S K R+N LH Q GS+ LLP
Sbjct: 71 PFAAALHCCPRPLAAWISGGDPKVKKRKNKLHLQFCGSLPLLLP 114
>06_03_1260 + 28805490-28805706,28807167-28807387
Length = 145
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 204 LLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLRF 332
LLH ++ HLLPH P LV +T V C+ +
Sbjct: 46 LLHLLAVALLHLLPHQGEEAPLAAAAADLVPVTRREVVLCIGY 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,267,779
Number of Sequences: 37544
Number of extensions: 400619
Number of successful extensions: 1012
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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