Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2083
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 212 2e-55
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 211 3e-55
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 206 9e-54
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 161 3e-40
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 106 2e-23
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 99 2e-21
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 6e-21
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 8e-21
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 97 1e-20
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 96 2e-20
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 95 6e-20
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 95 6e-20
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 94 8e-20
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 8e-20
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 1e-19
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 94 1e-19
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 91 9e-19
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 1e-18
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 90 1e-18
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 70 1e-12
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 68 8e-12
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 55 4e-08
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 53 2e-07
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 42 3e-04
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 32 0.35
SB_43588| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_20479| Best HMM Match : Collagen (HMM E-Value=1) 30 1.9
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 28 5.7
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_18359| Best HMM Match : UPF0171 (HMM E-Value=1e-09) 28 5.7
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 28 7.6
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 212 bits (517), Expect = 2e-55
Identities = 119/210 (56%), Positives = 127/210 (60%), Gaps = 2/210 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQ--NHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRR 200
GGTG G S P + N I+ SP PYNATLSVHQLV
Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDT--VVEPYNATLSVHQLVENTDE 198
Query: 201 NLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMV 380
L+TPTYGDLNHLVS TMSGVTTCLRFPGQLNADL KLAVNMV
Sbjct: 199 TYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMV 258
Query: 381 PFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYLTVXAXSX 560
PFPRLH FMPGFAPLTSRGS+QYRALTVPELTQQMFDA NMMA CDP HGRYLTV A
Sbjct: 259 PFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFR 318
Query: 561 AXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
+ + L + + E IPNN
Sbjct: 319 GRMSMKEVDEQMLNVQNKNSSYFVEWIPNN 348
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 211 bits (516), Expect = 3e-55
Identities = 108/167 (64%), Positives = 114/167 (68%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV L+TPTYGDLNHLVS TMSGVTTCLR
Sbjct: 182 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLNADL KLAVNMVPFPRLH FMPGFAPLTSRGS+QYRALTVPELTQQMFDA NMMA
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
CDP HGRYLTV A + + L + + E IPNN
Sbjct: 302 ACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNN 348
Score = 106 bits (254), Expect = 2e-23
Identities = 57/88 (64%), Positives = 59/88 (67%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
QLTHS GSGMG KI EYPDRIMNT+SVVPSPKVSDTVV+
Sbjct: 134 QLTHS-LGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
ENTDETYCIDNEALYDICFRTL P
Sbjct: 193 VENTDETYCIDNEALYDICFRTLKLTTP 220
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 206 bits (504), Expect = 9e-54
Identities = 107/167 (64%), Positives = 113/167 (67%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV L+TPTYGDLNHLVS TMSGVTTCLR
Sbjct: 127 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 186
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLNADL KLAVNMVPFPRL FMPGFAPLTSRGS+QYRALTVPELTQQMFDA NMMA
Sbjct: 187 FPGQLNADLRKLAVNMVPFPRLPFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 246
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
CDP HGRYLTV A + + L + + E IPNN
Sbjct: 247 ACDPLHGRYLTVAAMFRGRMSMKELDEQMLNVQNKNSSYFVEWIPNN 293
Score = 105 bits (251), Expect = 4e-23
Identities = 57/88 (64%), Positives = 59/88 (67%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
QLTHS GSGM LKI EYPDRIMNT+SVVPSPKVSDTVV+
Sbjct: 79 QLTHS-LGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 137
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
ENTDETYCIDNEALYDICFRTL P
Sbjct: 138 VENTDETYCIDNEALYDICFRTLKLTTP 165
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 161 bits (392), Expect = 3e-40
Identities = 83/167 (49%), Positives = 101/167 (60%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNA LSVHQL+ L+T TY DLNH++S TMSG+TTCLR
Sbjct: 87 PYNAALSVHQLLETTDEVFCIDNEALYDICYKTLKLNTTTYSDLNHIISNTMSGLTTCLR 146
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLNADL KLAVNM+P+PRLH FMPGFAPLTSR YRALTV +LTQ +FD N++
Sbjct: 147 FPGQLNADLRKLAVNMIPYPRLHFFMPGFAPLTSRECVSYRALTVADLTQAIFDNKNLLI 206
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
C+P G+YLT A + + ++ R + IPNN
Sbjct: 207 ACNPKRGKYLTYAAMYRGLMSMKEVEDQMAFAQDRYSSLFVDWIPNN 253
Score = 59.3 bits (137), Expect = 3e-09
Identities = 43/107 (40%), Positives = 56/107 (52%), Gaps = 24/107 (22%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVD--------H-- 153
QL HS GSG+G + EYPDRI+++ SV PSP+VS+ VV+ H
Sbjct: 15 QLLHS-LGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQL 73
Query: 154 ---TMRLSQFT-----------S*FENTDETYCIDNEALYDICFRTL 252
T +S+ E TDE +CIDNEALYDIC++TL
Sbjct: 74 LETTDEVSEIVVEPYNAALSVHQLLETTDEVFCIDNEALYDICYKTL 120
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 106 bits (254), Expect = 2e-23
Identities = 57/88 (64%), Positives = 59/88 (67%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
QLTHS GSGMG KI EYPDRIMNT+SVVPSPKVSDTVV+
Sbjct: 347 QLTHS-LGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 405
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
ENTDETYCIDNEALYDICFRTL P
Sbjct: 406 VENTDETYCIDNEALYDICFRTLKLTTP 433
Score = 75.4 bits (177), Expect = 4e-14
Identities = 39/64 (60%), Positives = 40/64 (62%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV L+TPTYGDLNHLVS TMSGVTTCLR
Sbjct: 395 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 454
Query: 330 FPGQ 341
FPGQ
Sbjct: 455 FPGQ 458
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 99 bits (238), Expect = 2e-21
Identities = 44/59 (74%), Positives = 49/59 (83%)
Frame = +3
Query: 375 MVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYLTVXA 551
MVPFPRLH FMPGFAPL SR ++QY+ ++V ELTQQMFDA NMM CDP HGRYLTV A
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRHGRYLTVAA 59
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +2
Query: 536 PYRRCXFRGRMSMK----EVDEQMLNIQNKNSLYF 628
P + RG + +K VDEQMLN QNKNS +F
Sbjct: 134 PLKEILCRGGLRLKGGKFRVDEQMLNTQNKNSPFF 168
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 97.9 bits (233), Expect = 6e-21
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ LS H + +H
Sbjct: 108 GGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTL-EHSDCA 166
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 167 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 226
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H M +AP+ S + +TV +LT F+ N M CDP HG+Y+
Sbjct: 227 YPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDPRHGKYM 278
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 97.5 bits (232), Expect = 8e-21
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCL 326
PYN+ L+ H + +H +I + + + PTY +LN L+S +S +T L
Sbjct: 555 PYNSILTTHTTL-EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQLVSSITASL 613
Query: 327 RFPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMM 506
RF G LN DL + N+VP+PR+H M +AP+ S + LTV ++T F+ N M
Sbjct: 614 RFDGALNVDLTEFQTNLVPYPRIHFPMASYAPVVSAEKAYHEQLTVADITNSCFEPANQM 673
Query: 507 AXCDPGHGRYL 539
CDP HG+Y+
Sbjct: 674 VKCDPRHGKYM 684
Score = 77.8 bits (183), Expect = 7e-15
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 947 GGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTL-EHSDCA 1005
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 1006 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 1065
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMM 506
+PR+H + +AP+ S + LTV E+T F+ N M
Sbjct: 1066 YPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 1106
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/82 (28%), Positives = 41/82 (50%)
Frame = +1
Query: 37 GSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS*FENTDETYCID 216
GSG ++ +Y + +++ P+P +S VV+ + + E++D + +D
Sbjct: 517 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLEHSDCAFMVD 576
Query: 217 NEALYDICFRTLNCPHPPTVTL 282
NEA+YDIC R L+ P L
Sbjct: 577 NEAIYDICRRNLDIERPTYTNL 598
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 96.7 bits (230), Expect = 1e-20
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 143 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTL-EHSDCA 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 202 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + LTV E+T F+ N M CDP HG+Y+
Sbjct: 262 YPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYM 313
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 96.7 bits (230), Expect = 1e-20
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 68 GGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTL-EHSDCA 126
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 127 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 186
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + LTV E+T F+ N M CDP HG+Y+
Sbjct: 187 YPRIHFPLATYAPVISAEKAYHEQLTVAEITNSCFEPANQMVKCDPRHGKYM 238
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 96.3 bits (229), Expect = 2e-20
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 128 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTL-EHSDCA 186
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 187 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 246
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + LTV E+T F+ N M CDP HG+Y+
Sbjct: 247 YPRIHFPLATYAPVISAEKAYHEQLTVAEITTSCFEPANQMVKCDPRHGKYM 298
Score = 82.6 bits (195), Expect = 3e-16
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + A V +++ P Q PYN+ L+ H + +H
Sbjct: 561 GGTGSGFSALLLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTL-EHSDCA 619
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ + + LR+ LN DL + N+VP
Sbjct: 620 FMVDNEAIYDICRRNLDIERPTYTNLNRLIDCVLHHCLSTLRWI--LNVDLMEFQTNLVP 677
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H M +AP+ S + +TV +LT F+ N M CDP HG+Y+
Sbjct: 678 YPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDPRHGKYM 729
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 96.3 bits (229), Expect = 2e-20
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 576 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL-EHSDCA 634
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 635 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 694
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + LTV E+T F+ N M CDP HG+Y+
Sbjct: 695 YPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYM 746
Score = 94.7 bits (225), Expect = 6e-20
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 143 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL-EHSDCA 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 202 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ N M CDP HG+Y+
Sbjct: 262 YPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 313
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 94.7 bits (225), Expect = 6e-20
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 728 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL-EHSDCA 786
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 787 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 846
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ N M CDP HG+Y+
Sbjct: 847 YPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 898
Score = 93.9 bits (223), Expect = 1e-19
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 207 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTL-EHSDCA 265
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 266 FMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVP 325
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ N M CDP HG+Y+
Sbjct: 326 YPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 377
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 94.7 bits (225), Expect = 6e-20
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 143 GGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTL-EHSDCA 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 202 FMVDNEAIYDICRRNLDIDRPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ N M CDP HG+Y+
Sbjct: 262 YPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 313
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 94.3 bits (224), Expect = 8e-20
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 142 GGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL-EHSDCA 200
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 201 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 260
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + LTV ++T F+ N M CDP HG+Y+
Sbjct: 261 YPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYM 312
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 94.3 bits (224), Expect = 8e-20
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + + V +++ P PYN+ L+ H + +H
Sbjct: 1054 GGTGSGFASLITEHLSVDYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTL-EHSDCT 1112
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I L + + P Y +LN L+ +S +T+ LRF G LN DL + N+VP
Sbjct: 1113 FMVDNEAIYDLCRRNLDVERPGYANLNRLIGQIVSSITSSLRFDGALNVDLTEFQTNLVP 1172
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + LTV ++T FD N M CDP HG+Y+
Sbjct: 1173 YPRIHFPLVTYAPVISPEKAYHEQLTVAQITNMCFDPNNQMVKCDPRHGKYM 1224
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 93.9 bits (223), Expect = 1e-19
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 80 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTL-EHSDCA 138
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 139 FMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVP 198
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ N M CDP HG+Y+
Sbjct: 199 YPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 250
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 93.9 bits (223), Expect = 1e-19
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 68 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTL-EHSDCA 126
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 127 FMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVP 186
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ N M CDP HG+Y+
Sbjct: 187 YPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 238
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 90.6 bits (215), Expect = 9e-19
Identities = 38/95 (40%), Positives = 56/95 (58%)
Frame = +3
Query: 255 LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSR 434
+ PTY +LN L+ +S +T LRF G LN DL + N+VP+PR+H + +AP+ S
Sbjct: 17 IERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISA 76
Query: 435 GSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+ LTV ++T F+ N M CDP HG+Y+
Sbjct: 77 EKAYHEQLTVADITNACFEPANQMVKCDPRHGKYM 111
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 211 IDNEALYDICFRTLNCPHPPTVTL 282
+DNEA+YDIC R L+ P L
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNL 25
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 90.2 bits (214), Expect = 1e-18
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 274 GGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTL-EHSDCA 332
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S VT LRF G LN DL + N+VP
Sbjct: 333 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSVTASLRFDGALNVDLTEFQTNLVP 392
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ + ++V E+T F+ N M CDP +G+Y+
Sbjct: 393 YPRIHFPLATYAPVIGADKAYHENMSVAEITSACFEPSNQMVKCDPRYGKYM 444
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 90.2 bits (214), Expect = 1e-18
Identities = 38/95 (40%), Positives = 56/95 (58%)
Frame = +3
Query: 255 LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSR 434
+ PTY +LN L+ +S +T LRF G LN DL + N+VP+PR+H + +AP+ S
Sbjct: 17 IERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISA 76
Query: 435 GSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+ L+V E+T F+ N M CDP HG+Y+
Sbjct: 77 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 111
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 211 IDNEALYDICFRTLNCPHPPTVTL 282
+DNEA+YDIC R L+ P L
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNL 25
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P PYN+ L+ H + +H
Sbjct: 133 GGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTL-EHSDCA 191
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + P+Y +LN L+ +S VT LRF G LN DL + N+VP
Sbjct: 192 FMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSVTASLRFDGSLNVDLNEFQTNLVP 251
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELT 476
+PR+H + +AP+ S + LTV E+T
Sbjct: 252 YPRIHFPLATYAPVISAEKAYHEQLTVAEIT 282
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 67.7 bits (158), Expect = 8e-12
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSG+G KI EYPDR+++++ V+PSP VS+TV + F
Sbjct: 42 QIAHS-LGGGTGSGLGSLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQL 100
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
+ D CIDNEALY+IC+ L P
Sbjct: 101 VDVADAAICIDNEALYNICYNVLKRETP 128
Score = 58.8 bits (136), Expect = 4e-09
Identities = 42/107 (39%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQ--NHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRR 200
GGTG G+ S P + + +L SPL PYNATLS HQLV
Sbjct: 49 GGTGSGLGSLLLSKIREEYPDRLVSSFCVLPSPLVSET--VTEPYNATLSFHQLVDVADA 106
Query: 201 NLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLRFPGQ 341
+ TPTY +LN L++ TMSGVTT LRFPGQ
Sbjct: 107 AICIDNEALYNICYNVLKRETPTYSELNSLIATTMSGVTTSLRFPGQ 153
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 65.3 bits (152), Expect = 4e-11
Identities = 33/95 (34%), Positives = 51/95 (53%)
Frame = +3
Query: 147 RPYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCL 326
+PYN+ L++ +L ++ R + PT+ +N LVS M+ TT L
Sbjct: 220 QPYNSILTLKRLTQNADCVVVLDNTALNRIAADRLRIPNPTFSQVNQLVSTIMATSTTTL 279
Query: 327 RFPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTS 431
R+PG +N DL L +++P PRLH M G+ PLT+
Sbjct: 280 RYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTT 314
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/87 (28%), Positives = 45/87 (51%)
Frame = +3
Query: 279 LNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRAL 458
+N++V+ + +T+ RF G LN DL ++ +N+VPFP+LH + PL + +
Sbjct: 274 MNNIVANLILNMTSSARFEGSLNVDLNEITMNLVPFPKLHYLVSSQTPLYALTDVKLPPR 333
Query: 459 TVPELTQQMFDAXNMMAXCDPGHGRYL 539
+ ++ F + + DP H YL
Sbjct: 334 RLDQMFTDAFSKDHQLIKADPKHNLYL 360
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 37 GSGMGHPXHLKIP*EYPDRIMNTYSVVPSPK--VSDTVVDHTMRLSQFTS*FENTDETYC 210
GSG+G + +YPD T +V PS V + + + + Q T E+ D
Sbjct: 158 GSGVGTYVLNLLHDDYPDVYRFTTAVYPSADDDVITSPYNSVLAMHQLT---EHADCVLP 214
Query: 211 IDNEALYDIC 240
I+N+AL DIC
Sbjct: 215 IENQALVDIC 224
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG + + V +++ P Q PYN+ L+ H + +H
Sbjct: 18 GGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTL-EHSDCA 76
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+I + + + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 77 FMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVP 136
Query: 384 FP 389
+P
Sbjct: 137 YP 138
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1
Query: 37 GSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKV 132
GSG+G KI EYPDRI++ +SVVPSPKV
Sbjct: 100 GSGLGTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +2
Query: 536 PYRRCXFRGRMSMK----EVDEQMLNIQNKNSLYF 628
P + RG + +K VDEQMLN QNKNS +F
Sbjct: 72 PLKEILCRGGLRLKGGKFRVDEQMLNTQNKNSPFF 106
>SB_43588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 101 THTQ*SPRPKYQTLSSTIQCDSLSSPASLKTQTKPTASTTRLYTTSASALXTVH 262
+HT +P P QT+++ +Q + S TQT P ASTT TT + + H
Sbjct: 214 SHTN-TPTPTPQTITAAVQTIPIVK-TSATTQTPPIASTTDTSTTQSPPIALHH 265
>SB_20479| Best HMM Match : Collagen (HMM E-Value=1)
Length = 1214
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/92 (28%), Positives = 40/92 (43%)
Frame = +2
Query: 35 RGPVWGTLLIXRSRESTPTES*THTQ*SPRPKYQTLSSTIQCDSLSSPASLKTQTKPTAS 214
R P+ T + S P S T S +P +T ++ I C + S P ++T T T +
Sbjct: 785 RKPLSTTPPLHNSSPQYPCHS-FRTSPSIQPYIET-NTPIDCGNSSFPIEMRTATSRTTT 842
Query: 215 TTRLYTTSASALXTVHTHLR*P*PLSFPHNVW 310
++TTS + + PLS NVW
Sbjct: 843 VVTIHTTSLNNYADL--------PLSLLRNVW 866
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 69 DPVRVPRQNHEHILSSPLAQSIR 137
D RV R+N HI+S+PL Q IR
Sbjct: 968 DRGRVYRRNRRHIISTPLDQPIR 990
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 69 DPVRVPRQNHEHILSSPLAQSIR 137
D RV R+N HI+S+PL Q IR
Sbjct: 246 DRGRVYRRNRRHIISTPLDQPIR 268
>SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 69 DPVRVPRQNHEHILSSPLAQSIR 137
D RV R+N HI+S+PL Q IR
Sbjct: 75 DRGRVYRRNRRHIISTPLDQPIR 97
>SB_18359| Best HMM Match : UPF0171 (HMM E-Value=1e-09)
Length = 557
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 258 STPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVPFPR 392
S+P +G LN + SLT S + + R P N + KL PR
Sbjct: 465 SSPEFGVLNSVPSLTYSEMRSIHRVPAAKNEEDLKLFARTRTLPR 509
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 69 DPVRVPRQNHEHILSSPLAQSIR 137
D RV R+N HI+S+PL Q IR
Sbjct: 968 DRGRVYRRNRRHIISTPLDQPIR 990
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 27.9 bits (59), Expect = 7.6
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Frame = +3
Query: 87 RQNHEHILSSP-LAQSIRHCRRPYNATLSVHQLV*-KHRRNLLH-RQRGSIRHLLP-HSX 254
R++H H +++ L+Q++ + A+++ H V K RN L R+RG IR L P +
Sbjct: 713 RESHHHKVTTVFLSQNLFPGGKSRTASINSHYFVLFKDPRNKLGVRERGGIRVLAPPQAP 772
Query: 255 LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNM--VPFPRLHXFMPGFAPLT 428
+ P G + R+ +L + L + VP PR MP +PL+
Sbjct: 773 VRLPFGGHGLAWLEGQRRRYELERRYNERLGIEPPPLPEGLRPVPSPRTPSPMPSLSPLS 832
Query: 429 SRGS---RQYRALTVP 467
S S R R + +P
Sbjct: 833 STDSSTPRSRRTIDLP 848
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,560,953
Number of Sequences: 59808
Number of extensions: 445279
Number of successful extensions: 1223
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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