Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2083
(650 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 190 7e-49
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 190 9e-49
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 189 2e-48
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 188 2e-48
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 188 2e-48
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 186 1e-47
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 186 1e-47
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 184 6e-47
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 182 1e-46
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 113 7e-26
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 109 2e-24
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 109 2e-24
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 103 8e-23
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 103 8e-23
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 103 8e-23
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 103 8e-23
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 73 2e-13
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 73 2e-13
At1g11600.1 68414.m01332 cytochrome P450, putative similar to cy... 29 3.5
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 27 8.2
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 27 8.2
At3g54830.1 68416.m06074 amino acid transporter family protein b... 27 8.2
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 27 8.2
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 190 bits (463), Expect = 7e-49
Identities = 95/167 (56%), Positives = 111/167 (66%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+TP++GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYRALTVPELTQQM+DA NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + + + + E IPNN
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNN 348
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTP 220
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 190 bits (462), Expect = 9e-49
Identities = 96/167 (57%), Positives = 110/167 (65%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ LSTP++GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYR LTVPELTQQM+DA NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + L + + E IPNN
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNN 348
Score = 83.8 bits (198), Expect = 9e-17
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLSTP 220
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 189 bits (460), Expect = 2e-48
Identities = 94/167 (56%), Positives = 111/167 (66%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+TP++GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYRALTVPELTQQM+D+ NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + + + + E IPNN
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNN 348
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTP 220
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 188 bits (459), Expect = 2e-48
Identities = 94/167 (56%), Positives = 111/167 (66%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+TP++GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYR+LTVPELTQQM+D+ NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + L + + E IPNN
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNN 348
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTP 220
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 188 bits (459), Expect = 2e-48
Identities = 94/167 (56%), Positives = 111/167 (66%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+TP++GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QYR+LTVPELTQQM+D+ NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + L + + E IPNN
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNN 348
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTP 220
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 186 bits (452), Expect = 1e-47
Identities = 93/167 (55%), Positives = 109/167 (65%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+ PT+GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QY AL+VPELTQQM+DA NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + + + + E IPNN
Sbjct: 302 AADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNN 348
Score = 85.0 bits (201), Expect = 4e-17
Identities = 47/88 (53%), Positives = 53/88 (60%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL +P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLANP 220
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 186 bits (452), Expect = 1e-47
Identities = 93/167 (55%), Positives = 109/167 (65%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ L+ PT+GDLNHL+S TMSGVT CLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLR 241
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QY AL+VPELTQQM+DA NMM
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMC 301
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + + + + E IPNN
Sbjct: 302 AADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNN 348
Score = 85.0 bits (201), Expect = 4e-17
Identities = 47/88 (53%), Positives = 53/88 (60%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 134 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL +P
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLANP 220
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 184 bits (447), Expect = 6e-47
Identities = 94/167 (56%), Positives = 109/167 (65%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ LSTP++GDLNHL+S TMSGVT LR
Sbjct: 183 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLR 242
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QY +LTVPELTQQM+DA NMM
Sbjct: 243 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMC 302
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + L + + E IPNN
Sbjct: 303 AADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNN 349
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 135 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 193
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 194 VENADECMVLDNEALYDICFRTLKLSTP 221
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 182 bits (444), Expect = 1e-46
Identities = 93/167 (55%), Positives = 109/167 (65%)
Frame = +3
Query: 150 PYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCLR 329
PYNATLSVHQLV ++ LSTP++GDLNHL+S TMSGVT LR
Sbjct: 183 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLR 242
Query: 330 FPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMA 509
FPGQLN+DL KLAVN++PFPRLH FM GFAPLTSRGS+QY +LTVPELTQQM+D+ NMM
Sbjct: 243 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMC 302
Query: 510 XCDPGHGRYLTVXAXSXAXCP*RRSTSKCLTSKTRTPYTLGEXIPNN 650
DP HGRYLT A + + L + + E IPNN
Sbjct: 303 AADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNN 349
Score = 83.4 bits (197), Expect = 1e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +1
Query: 4 QLTHSPRWAAPGSGMGHPXHLKIP*EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS* 183
Q+ HS GSGMG KI EYPDR+M T+SV PSPKVSDTVV+
Sbjct: 135 QVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 193
Query: 184 FENTDETYCIDNEALYDICFRTLNCPHP 267
EN DE +DNEALYDICFRTL P
Sbjct: 194 VENADECMVLDNEALYDICFRTLKLSTP 221
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 113 bits (273), Expect = 7e-26
Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG G+ V +++ P Q PYN+ LS H L+ +H +
Sbjct: 143 GGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLL-EHTDVV 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+ +I + S + PTY +LN L+S T+S +TT LRF G +N D+ + N+VP
Sbjct: 202 VLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + +VPE+T +F+ NMMA CDP HG+Y+
Sbjct: 262 YPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYM 313
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 109 bits (262), Expect = 2e-24
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG G+ V +++ P Q PYN+ LS H L+ +H
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLL-EHTDVA 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+ +I + S + PTY +LN L+S +S +TT LRF G +N D+ + N+VP
Sbjct: 202 VLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+VPE+T +F+ +MMA CDP HG+Y+
Sbjct: 262 YPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYM 313
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 109 bits (262), Expect = 2e-24
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG G+ V +++ P Q PYN+ LS H L+ +H
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLL-EHTDVA 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+ +I + S + PTY +LN L+S +S +TT LRF G +N D+ + N+VP
Sbjct: 202 VLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+VPE+T +F+ +MMA CDP HG+Y+
Sbjct: 262 YPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYM 313
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 103 bits (248), Expect = 8e-23
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG G+ V +++ P Q PYN+ LS H L+ +H
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLL-EHTDVS 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+ +I + S + PTY +LN LVS +S +T LRF G LN D+ + N+VP
Sbjct: 202 ILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ +MMA CDP HG+Y+
Sbjct: 262 YPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 103 bits (248), Expect = 8e-23
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG G+ V +++ P Q PYN+ LS H L+ +H
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLL-EHTDVS 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+ +I + S + PTY +LN LVS +S +T LRF G LN D+ + N+VP
Sbjct: 202 ILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ +MMA CDP HG+Y+
Sbjct: 262 YPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 103 bits (248), Expect = 8e-23
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG G+ V +++ P Q PYN+ LS H L+ +H
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLL-EHTDVS 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+ +I + S + PTY +LN LVS +S +T LRF G LN D+ + N+VP
Sbjct: 202 ILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ +MMA CDP HG+Y+
Sbjct: 262 YPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 103 bits (248), Expect = 8e-23
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Frame = +3
Query: 27 GGTGVRYGAPXSSXDPVRVPRQNHEHILSSPLAQSIRHCRRPYNATLSVHQLV*KHRRNL 206
GGTG G+ V +++ P Q PYN+ LS H L+ +H
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLL-EHTDVS 201
Query: 207 LHRQRGSIRHLLPHSX-LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLXKLAVNMVP 383
+ +I + S + PTY +LN LVS +S +T LRF G LN D+ + N+VP
Sbjct: 202 ILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVP 261
Query: 384 FPRLHXFMPGFAPLTSRGSRQYRALTVPELTQQMFDAXNMMAXCDPGHGRYL 539
+PR+H + +AP+ S + L+V E+T F+ +MMA CDP HG+Y+
Sbjct: 262 YPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 72.9 bits (171), Expect = 2e-13
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +3
Query: 147 RPYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCL 326
+PYN+ L++ +L ++ R + L+ PT+ N LVS MS TT L
Sbjct: 184 QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTL 243
Query: 327 RFPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLT-SRGSRQYRALTVPELTQQMFDAXNM 503
R+PG +N DL L +++P PR H M G+ PLT R + R TV ++ +++ N+
Sbjct: 244 RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI 303
Query: 504 M 506
M
Sbjct: 304 M 304
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +3
Query: 147 RPYNATLSVHQLV*KHRRNLLHRQRGSIRHLLPHSXLSTPTYGDLNHLVSLTMSGVTTCL 326
+PYN+ L++ +L ++ R + L+ PT+ N LVS MS TT L
Sbjct: 184 QPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTL 243
Query: 327 RFPGQLNADLXKLAVNMVPFPRLHXFMPGFAPLT-SRGSRQYRALTVPELTQQMFDAXNM 503
R+PG +N DL L +++P PR H M G+ PLT R + R TV ++ +++ N+
Sbjct: 244 RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI 303
Query: 504 M 506
M
Sbjct: 304 M 304
>At1g11600.1 68414.m01332 cytochrome P450, putative similar to
cytochrome P450 77A2 (CYPLXXVIIA2) (P-450EG5) [Solanum
melongena] and cytochrome P450 77A3 (SP:O48928) [Glycine
max]; is a member of the PF|00067 Cytochrome P450
family. ESTs gb|Z30775 and gb|Z30776 come from this gene
Length = 510
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = +3
Query: 297 LTMSGVTTCLRFPGQLNADLXKLAVN------MVPFPRLHXFMPGFAPLTSRGSRQYRAL 458
LT+ + CL F +++ + K N ++ P L F+P F PL R R+ R L
Sbjct: 184 LTICSILICLCFGAKISEEKIKNIENVLKDVMLITSPTLPDFLPVFTPLFRRQVREAREL 243
Query: 459 TVPEL 473
+L
Sbjct: 244 RKTQL 248
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 27.5 bits (58), Expect = 8.2
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +3
Query: 258 STPTYGDLNHLVSLTMSGVTTCLRFPG-QLN---ADLXKLAVNMVPFPRLHXFMPGFAPL 425
S PT +L LVSL + G + RFP N DL + + VP+ + F L
Sbjct: 849 SLPTGINLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFF--NLTKL 906
Query: 426 TSRGSRQYRALTV 464
T +G R+ + +++
Sbjct: 907 TMKGCRELKCVSL 919
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 27.5 bits (58), Expect = 8.2
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +3
Query: 258 STPTYGDLNHLVSLTMSGVTTCLRFPG-QLN---ADLXKLAVNMVPFPRLHXFMPGFAPL 425
S PT +L LVSL + G + RFP N DL + + VP+ + F L
Sbjct: 810 SLPTGINLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFF--NLTKL 867
Query: 426 TSRGSRQYRALTV 464
T +G R+ + +++
Sbjct: 868 TMKGCRELKCVSL 880
>At3g54830.1 68416.m06074 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 546
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 79 EYPDRIMNTYSVVPSPKVSDTVVDHTMRLSQFTS 180
E P ++T+S++PS S VV H M +S +S
Sbjct: 118 EAPKHKLSTHSLLPSKPSSSMVVSHDMGISNDSS 151
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 335 RSVER*SXKIGRKHGSLPASPLXHARFRSPHIPWKQTVPCLD 460
+ VER KI RK S L + R P W ++ P L+
Sbjct: 588 QEVERVRQKIRRKEASSSYQALLVEKIRDPEASWTESKPILE 629
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,507,958
Number of Sequences: 28952
Number of extensions: 290162
Number of successful extensions: 816
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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