Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2082
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 52 4e-07
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 52 4e-07
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 49 2e-06
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 47 1e-05
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 46 2e-05
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 44 8e-05
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 44 1e-04
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 43 2e-04
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 42 3e-04
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 42 3e-04
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 42 3e-04
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 42 3e-04
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 41 6e-04
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 41 6e-04
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 40 0.001
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 40 0.001
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 40 0.001
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 40 0.001
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 39 0.002
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 38 0.004
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z75529-2|CAA99783.1| 755|Caenorhabditis elegans Hypothetical pr... 35 0.039
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 35 0.039
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 35 0.039
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 35 0.039
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 31 0.83
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 30 1.1
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 30 1.1
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 29 3.3
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 170 RDYYRPW--KQMAIANRDVGSTI--TSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGK 337
R RP+ Q + VG I +N ++ V++ V F PE + V D +I+EGK
Sbjct: 26 RHMIRPYWADQTMLTGHRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGK 85
Query: 338 HEERQDXHGYIFRQFTR 388
H E+ D +G + R F R
Sbjct: 86 HNEKTDKYGQVERHFVR 102
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 170 RDYYRPW--KQMAIANRDVGSTI--TSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGK 337
R RP+ Q + VG I +N ++ V++ V F PE + V D +I+EGK
Sbjct: 25 RHMIRPYWADQTMLTGHRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGK 84
Query: 338 HEERQDXHGYIFRQFTR 388
H E+ D +G + R F R
Sbjct: 85 HNEKTDKYGQVERHFVR 101
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +2
Query: 230 ITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
+ + K+KF+V L VQ F+P+ I VK + +++ +HE R D HG + R+ R
Sbjct: 27 VHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTVAREINR 79
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 215 DVGSTITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
DV S + ++ +F V++ F PE I VKT D +++EG+HE+ +D + F R
Sbjct: 102 DVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVR 159
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +2
Query: 215 DVGSTITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
++G I +++ KF V L V HF PE + +K + +EG E + + HGY+ R F++
Sbjct: 43 NIGEQIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSE-HGYLKRSFSK 99
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 215 DVGSTITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
++G I +++ KF V L V HF PE + ++ + +EG E++ + HGY R F++
Sbjct: 43 NIGEQIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSE-HGYSKRSFSK 99
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 152 ITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVE 331
+T ++ Y+R + D I +++ KF V L V HF PE + +K + +E
Sbjct: 21 LTGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIE 80
Query: 332 GKHEERQDXHGYIFRQFTR 388
G E + + HGY+ R F++
Sbjct: 81 GIQETKSE-HGYLKRSFSK 98
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2
Query: 230 ITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
I +++ KF V L V HF PE + +K + +EG E + + HGY+ R F++
Sbjct: 1 IVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSE-HGYLKRSFSK 52
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 152 ITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVE 331
IT ++ Y+R + D I +++ KF V L V HF PE + ++ + +E
Sbjct: 13 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 72
Query: 332 GKHEERQDXHGYIFRQFTR 388
G E++ + HGY R F++
Sbjct: 73 GIQEKKSE-HGYSKRSFSK 90
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 152 ITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVE 331
IT ++ Y+R + D I +++ KF V L V HF PE + ++ + +E
Sbjct: 21 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 80
Query: 332 GKHEERQDXHGYIFRQFTR 388
G E++ + HGY R F++
Sbjct: 81 GIQEKKSE-HGYSKRSFSK 98
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 152 ITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVE 331
IT ++ Y+R + D I +++ KF V L V HF PE + ++ + +E
Sbjct: 21 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 80
Query: 332 GKHEERQDXHGYIFRQFTR 388
G E++ + HGY R F++
Sbjct: 81 GIQEKKSE-HGYSKRSFSK 98
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 152 ITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVE 331
IT ++ Y+R + D I +++ KF V L V HF PE + ++ + +E
Sbjct: 21 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 80
Query: 332 GKHEERQDXHGYIFRQFTR 388
G E++ + HGY R F++
Sbjct: 81 GIQEKKSE-HGYSKRSFSK 98
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 224 STITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
S I +N KF +NL V F PE + + + ++G+ E + D HGY + F+R
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTD-HGYSKKSFSR 94
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 224 STITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
S I +N KF +NL V F PE + + + ++G+ E + D HGY + F+R
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTD-HGYSKKSFSR 94
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +2
Query: 224 STITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
S I ++ DKF VNL V +F PE + V + ++G+H+ ++ HG + F+R
Sbjct: 43 SEIMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEHDV-ENEHGASRKSFSR 96
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 224 STITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
S I +N KF +NL V F PE + + DG+ + +E + HGY + F+R
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKI-NLDGHTLSIQGEQELKTEHGYSKKSFSR 94
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 224 STITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
S I +N KF +NL V F PE + + DG+ + +E + HGY + F+R
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKI-NLDGHTLSIQGEQELKTEHGYSKKSFSR 94
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 224 STITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
S I +N KF +NL V F PE + + DG+ + +E + HGY + F+R
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKI-NLDGHTLSIQGEQELKTEHGYSKKSFSR 94
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 230 ITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
I +N KF +NL V F PE + + DG+ + +E + HGY + F+R
Sbjct: 44 IVNNDQKFAINLNVSQFKPEDLKI-NLDGHTLSIQGEQELKTEHGYSKKSFSR 95
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 224 STITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTRGLP 397
++I F L V + + + V D +IVEG H E++D +G I F R P
Sbjct: 72 TSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFP 129
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 230 ITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
+ + KF V L V F PE + V + +EG HE + + HG+ R FTR
Sbjct: 46 VENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVKTE-HGFSKRSFTR 97
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 230 ITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
+T+ +KF+V L F P I VK +I+ +H+ R +G + R+ R
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHR 79
>Z75529-2|CAA99783.1| 755|Caenorhabditis elegans Hypothetical
protein C44H9.2 protein.
Length = 755
Score = 35.1 bits (77), Expect = 0.039
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 113 DWRLLPDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLXVQHF-SPE 289
+W LLPD T + P + + Y+ W + + +T + V +Q F +PE
Sbjct: 568 NWNLLPDSSRTVIDMPVLMKHYFVGWALGTVFGIEQTKHLTDEMKRAIVRKVIQDFTTPE 627
Query: 290 XISVKTADGYVIVEGKHEER 349
+ + Y +E H+E+
Sbjct: 628 KLQGEAKTIYENMETMHKEQ 647
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 35.1 bits (77), Expect = 0.039
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +2
Query: 236 SNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
S+ ++ V ++ PE ++VKT D ++V KHEE+ +FR++ +
Sbjct: 23 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQR-TVFREYNQ 72
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 35.1 bits (77), Expect = 0.039
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +2
Query: 236 SNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
S+ ++ V ++ PE ++VKT D ++V KHEE+ +FR++ +
Sbjct: 120 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQR-TVFREYNQ 169
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 35.1 bits (77), Expect = 0.039
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +2
Query: 236 SNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
S+ ++ V ++ PE ++VKT D ++V KHEE+ +FR++ +
Sbjct: 134 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQR-TVFREYNQ 183
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 30.7 bits (66), Expect = 0.83
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 230 ITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
IT+ F + + V HF PE I V D + + G+ E + R F+R
Sbjct: 97 ITNTSHGFTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSR 149
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 30.7 bits (66), Expect = 0.83
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 230 ITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEERQDXHGYIFRQFTR 388
IT+ F + + V HF PE I V D + + G+ E + R F+R
Sbjct: 97 ITNTSHGFTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSR 149
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 230 ITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKH---EERQDXHGYIFRQFTR 388
+T+ +KF+V L F P I VK +I+ +H + R +G + R+ R
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHR 82
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 230 ITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKH---EERQDXHGYIFRQFTR 388
+T+ +KF+V L F P I VK +I+ +H + R +G + R+ R
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHR 82
>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
protein C44H9.4 protein.
Length = 1099
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/70 (24%), Positives = 27/70 (38%)
Frame = +2
Query: 101 IRTSDWRLLPDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLXVQHF 280
+ S+W LPD T + P + D + W ++ G +T K V Q +
Sbjct: 625 VSESNWNSLPDSSKTELDMPILMEDEFFEWATNTEIQKENGENLTREMKKAIVEQSTQKY 684
Query: 281 SPEXISVKTA 310
+ I V A
Sbjct: 685 HCKGILVGEA 694
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 215 DVGSTITSNKDKFQVNLXVQHFSPEXISVKTADGYVIVEGKHEE 346
D + I +KF VNL V PE + + + ++ +H+E
Sbjct: 39 DCRNEIVDTHEKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQE 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,451,827
Number of Sequences: 27780
Number of extensions: 181290
Number of successful extensions: 521
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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