Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2077
(600 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1828 - 40174446-40174543,40175031-40175171,40176518-401767... 93 2e-19
04_03_0684 - 18670697-18670933,18671003-18671102,18671214-186712... 84 7e-17
03_05_0902 + 28643395-28643708,28643830-28643921,28644342-286444... 40 0.002
10_08_0977 - 21985149-21985277,21985348-21985722,21985824-219858... 38 0.008
09_06_0370 - 22610441-22610569,22610659-22611060,22611141-226111... 34 0.076
10_07_0137 + 13318208-13318225,13318458-13318748,13319295-13319438 32 0.40
06_01_0989 + 7672764-7672904,7673017-7673067,7673176-7673296,767... 32 0.40
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 32 0.40
09_06_0032 + 20353789-20353963,20354240-20354340,20354426-203545... 31 0.70
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 31 0.70
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 30 1.6
01_05_0629 + 23809899-23810720 30 1.6
06_03_1248 + 28685911-28687719 29 2.2
12_01_0366 + 2779754-2779882,2780007-2780047,2780163-2780212,278... 29 2.8
04_02_0031 + 8874025-8874180,8882152-8882550,8882651-8882987,888... 29 2.8
07_01_1010 + 8561656-8561764,8563666-8563919,8564309-8564331,856... 29 3.8
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 28 5.0
04_04_0537 + 26079926-26079994,26080317-26080500,26081866-260839... 28 5.0
02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,290... 28 5.0
11_08_0021 + 27716298-27716478,27717137-27717309,27717408-277175... 28 6.6
08_02_1372 + 26500093-26500154,26500733-26500933,26501858-265019... 28 6.6
07_01_0070 + 515247-515397,516198-516265,516360-518456,518750-51... 28 6.6
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 27 8.7
04_04_0517 + 25841292-25842099,25842256-25842308 27 8.7
04_03_0761 + 19339944-19340311,19342544-19343084 27 8.7
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 27 8.7
01_01_0012 + 71903-72935,73468-73981,74619-76008 27 8.7
>01_06_1828 -
40174446-40174543,40175031-40175171,40176518-40176719,
40176815-40176914,40177029-40177081,40177951-40178097,
40178184-40178341,40178509-40178599,40179415-40179522,
40179815-40179952,40180154-40180246,40180342-40180434,
40180528-40180637,40181087-40181135,40181324-40181437,
40181530-40181589,40181674-40181742,40182034-40182135,
40182235-40182263,40182348-40182630,40183574-40183960
Length = 874
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/105 (42%), Positives = 67/105 (63%)
Frame = +3
Query: 189 PEVPIQTSRKLSEREQHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSE 368
P V ++ S SE+E + + + L+KSY+ IVRK+++D VPKA+MHFLVN K L +
Sbjct: 629 PPVVLKPSESQSEQEALEIAITKLLLKSYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNY 688
Query: 369 LVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQRAGQIISEI 503
L+T LY+ D ML E + I +R++ D LK LQ+A + + EI
Sbjct: 689 LITKLYRDDLFADMLREPDEITIKRRQIRDTLKVLQQAYKTLDEI 733
>04_03_0684 -
18670697-18670933,18671003-18671102,18671214-18671266,
18671664-18671810,18671901-18672031,18673064-18673088,
18673201-18673305,18673941-18674054,18674900-18674992,
18675101-18675193,18675951-18676057,18676442-18676490,
18677140-18677253,18677728-18677787,18677887-18677955,
18679154-18679255,18679338-18679366,18679450-18679732,
18680399-18680752
Length = 754
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/104 (36%), Positives = 66/104 (63%)
Frame = +3
Query: 189 PEVPIQTSRKLSEREQHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSE 368
P + ++ S ++ + +++ LIKSY+ IVRKSI+D+VPKA+MHFLVN K L +
Sbjct: 577 PPITLKPSENQPAQDATEVAIVKLLIKSYYDIVRKSIEDAVPKAIMHFLVNHTKRELHNV 636
Query: 369 LVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQRAGQIISE 500
L+ LY+ + + ML E++ + RR+ + L+ L++A + + E
Sbjct: 637 LIRKLYRENLLDEMLRETDEVIIRRQRIQETLQVLEQAHRTLEE 680
>03_05_0902 +
28643395-28643708,28643830-28643921,28644342-28644443,
28645135-28645185,28645267-28645328,28645664-28645754,
28645911-28645975,28646053-28646247,28646346-28646465,
28646630-28646700,28646839-28647064,28647474-28647524,
28647629-28647857,28648140-28648279,28648527-28648652
Length = 644
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +3
Query: 264 IKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSD--QAESMLNESEHIAQ 437
+ SY +V +++++++PKAV+H V K NL + H+ + Q +ML+E + +
Sbjct: 560 VSSYINMVCETLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 619
Query: 438 RRKEAADMLKALQRAGQIISEI 503
+R L+ + A I +
Sbjct: 620 KRDSLVKRLELYKSARNEIDSV 641
>10_08_0977 -
21985149-21985277,21985348-21985722,21985824-21985874,
21985964-21986189,21986289-21986359,21986430-21986549,
21986641-21986835,21986921-21986985,21987894-21987984,
21988700-21988761,21988854-21988904,21989172-21989273,
21989873-21989980,21990071-21990134,21990246-21990392
Length = 618
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +3
Query: 264 IKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSD--QAESMLNESEHIAQ 437
+ SY +V ++++++PKAV+H V K +L + T + + D Q +L+E + +
Sbjct: 533 VSSYIGMVSDTLKNTIPKAVVHCQVREAKRSLLNYFYTQVGRKDAKQLAQLLDEDPALME 592
Query: 438 RRKEAADMLKALQRAGQIISEI 503
RR++ L+ + A I +
Sbjct: 593 RRQQCFKRLELYKSARDEIDAV 614
>09_06_0370 -
22610441-22610569,22610659-22611060,22611141-22611191,
22611475-22611700,22612219-22612289,22612411-22612530,
22612618-22612812,22612995-22613059,22613306-22613396,
22613611-22613672,22613796-22613846,22614326-22614427,
22614876-22614939,22615104-22615247
Length = 590
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +3
Query: 264 IKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQAE--SMLNESEHIAQ 437
+ Y +V + +PKAV+H V K +L + H+ K + ++ +L+E + +
Sbjct: 505 VSQYIKMVGDQLLHKIPKAVVHCQVREAKRSLLNHFYVHIGKKEASQFGHLLDEDPAMLE 564
Query: 438 RRKEAADMLKALQRAGQIISEIRET 512
RR++ L+ + A I + T
Sbjct: 565 RRQQCWKRLELYKSARDEIDSVAWT 589
>10_07_0137 + 13318208-13318225,13318458-13318748,13319295-13319438
Length = 150
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 2 DDDHSPVYRHKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQ 136
DDD +HK P P+PN A D H + P + + + PT+Q
Sbjct: 63 DDDLLAAQQHKAAAPQPAPNASAAADDHRR-PLH-AAHDDSPTEQ 105
>06_01_0989 +
7672764-7672904,7673017-7673067,7673176-7673296,
7673406-7673510,7673963-7674024,7674398-7674515,
7674596-7674932,7675389-7675536,7675632-7675733,
7675824-7675943,7676436-7676519,7676622-7676749,
7677351-7677435,7677566-7677713,7677971-7678047,
7678187-7678243,7678423-7678561,7678642-7678796,
7679003-7679116,7679208-7679275,7679830-7679996,
7680245-7680453
Length = 911
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 264 IKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQA--ESMLNESEHIAQ 437
++ Y V S+ +VPKA++ V K+++ ++L + + A E +L E +H A+
Sbjct: 747 VRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQE-DHNAK 805
Query: 438 RRKE 449
RR+E
Sbjct: 806 RRRE 809
>02_05_0684 -
30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 264 IKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQA--ESMLNESEHIAQ 437
++ Y V S+ +VPKA++ V K+++ ++L + + A E +L E +H A+
Sbjct: 761 VRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSKISAQTNAKIEELLQE-DHNAK 819
Query: 438 RRKE 449
RR+E
Sbjct: 820 RRRE 823
>09_06_0032 +
20353789-20353963,20354240-20354340,20354426-20354560,
20354633-20354714,20354829-20354896,20354984-20355073,
20355133-20355257,20355384-20355717,20355841-20355957,
20356058-20356485,20356564-20356813,20356944-20357194,
20357278-20357587
Length = 821
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 237 HDCDVIERLIKSYFYIVRKSIQ-DSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQAESML 413
HDC+V + ++YF+++ K Q DS+ V H ++F+K++L ++ H + ++
Sbjct: 666 HDCNV-SIVHRTYFFLLFKGDQTDSIYMEVEHRRLSFIKNSLIADGELHATTASSLRNLR 724
Query: 414 NESE 425
+E +
Sbjct: 725 HERD 728
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 8 DHSPVYRHKTPRPSPSPNVPAITDGHEK-SPQNISGNTVDPTDQRN-ARQQGTDSSEASE 181
D SP + + + +PSP + GH+ SP S DP+ R +R +S + S
Sbjct: 169 DLSPPRQRRRRQDTPSPKGSEVAGGHDDLSPPRKSRQQRDPSPPRRLSRHDSKESQDISP 228
Query: 182 PSARS 196
P R+
Sbjct: 229 PRRRT 233
>03_05_0728 -
27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +3
Query: 336 VNFVKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQRAGQIISEIRETH 515
+N+ + LQ H++K +Q E E + D+L +++ G +I+ + E
Sbjct: 424 INYTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFVDNQDVLDLIEKKGGLIALLDEAC 483
Query: 516 MWXWSSXE 539
M+ S+ E
Sbjct: 484 MFPRSTHE 491
>01_05_0629 + 23809899-23810720
Length = 273
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 35 TPRPSPSPNVPAITDGHEKSPQNIS--GNTVDPTDQRNARQQGTDSSEASEPSARSTD 202
T PS PA TD E S + + + D ++ A TD+SE SE +TD
Sbjct: 108 TDASEPSEADPAATDASEPSEADPAPRATSADASEPSEADPAATDASEPSEADPAATD 165
>06_03_1248 + 28685911-28687719
Length = 602
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +3
Query: 75 PMVTRNLHKTSAETPSTPQ-INGMPDNK--ALTPQKPVNLLPEVPIQTSRKLSEREQ 236
P V+ +LH +S+ +PS+ ++ P +K TP++ + P +SR ++ +++
Sbjct: 53 PTVSSSLHSSSSSSPSSSSLLSSSPSSKGTGTTPRRSADKAPSASAASSRPITPKDK 109
>12_01_0366 +
2779754-2779882,2780007-2780047,2780163-2780212,
2780824-2780968,2781298-2781354,2781448-2781571,
2781798-2782259,2782493-2782564
Length = 359
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +2
Query: 5 DDHSPVYRHKTP--RPSPSPNVPA-ITDGHEKSP 97
D H P Y H TP +P P P PA +T H P
Sbjct: 287 DAHRPAYGHGTPLLQPLPPPTPPASLTPVHNDEP 320
>04_02_0031 +
8874025-8874180,8882152-8882550,8882651-8882987,
8883234-8884060
Length = 572
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +3
Query: 267 KSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELV-THLYKSDQAESMLNESEHIAQRR 443
KS F + S+P + F++NF NL L+ H ES+ S H+
Sbjct: 173 KSLFACRLAEVNPSLPPSFEPFIMNFNMKNLNRTLIELHGMLKTAEESIKKNSNHVMVMH 232
Query: 444 KEAADMLKALQRAGQIISEIRET 512
K + K+ Q+ EI T
Sbjct: 233 KRKPNNKKSGQKRKLNSDEITST 255
>07_01_1010 +
8561656-8561764,8563666-8563919,8564309-8564331,
8564926-8564962,8565503-8565985
Length = 301
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 368 ARHSPVQV*PGREHAQRV*AHRTAEEGGRRHAKGFTTCRSNHKRDPRD 511
ARH + ++ V RTA GG H +G+T+ RS++ +P D
Sbjct: 26 ARHVAAAIKGTGADSEMVVTERTAGGGGG-HGRGYTSHRSHNPNNPND 72
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 330 FLVNFVKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQ-RAGQIISEIR 506
F +N+ + LQ H++K +Q E + + + D+L ++ + G +I+ +
Sbjct: 990 FCINYTNEKLQQHFNQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGVIALLD 1049
Query: 507 ETHMWXWSSXERXS 548
E M+ S+ E S
Sbjct: 1050 EACMFPKSTHETFS 1063
>04_04_0537 +
26079926-26079994,26080317-26080500,26081866-26083910,
26084323-26084424,26084566-26084622
Length = 818
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/88 (19%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +3
Query: 180 NLLPEVPIQTSRKLSEREQHDCDV-IERLIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDN 356
+L+ ++ + +KL+E E + ++ +E L + Y + + + ++ HF+ F+KD
Sbjct: 475 DLVRKLAVLDVQKLTE-ENGELNIRVELLCEIYTTVFKDLVSKLSSESAEHFIRTFIKDE 533
Query: 357 LQSELVTHLYKS-DQAESMLNESEHIAQ 437
+++ + K M+ +HI +
Sbjct: 534 VEAVIFARTLKEIKSVTEMVRSEKHIKE 561
>02_01_0399 -
2905026-2905406,2905522-2905630,2905809-2907475,
2907650-2907790,2907870-2908043,2908577-2908851,
2909592-2909755,2910409-2910536,2910628-2910734,
2911747-2911880,2912266-2912441,2912530-2914257,
2915084-2915239,2915328-2915486,2915581-2915751,
2915931-2916047,2916417-2916473,2916565-2916680,
2916790-2916916,2917862-2917945
Length = 2056
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 153 KALTPQKPVNLLPEVPIQTSRKLSER 230
+ L P++ +N+L ++P +T RKL+ R
Sbjct: 218 RTLLPEEALNILKKIPEETKRKLAAR 243
>11_08_0021 +
27716298-27716478,27717137-27717309,27717408-27717578,
27717967-27718077,27718168-27718245,27718642-27718832,
27718873-27718958,27719202-27719206,27719301-27719378,
27719465-27719527,27719597-27719680,27720049-27720209,
27720377-27720416,27720774-27720893,27720993-27721211,
27721927-27722100,27722202-27722883,27722986-27723185,
27723269-27723407,27723502-27723677
Length = 1043
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 339 NFVKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQRAGQ 488
+FVK+NL ELV L + Q+ ++++ +H A +L+++ R Q
Sbjct: 126 DFVKENLWPELVPQLKQVIQSSNIISPGQHPEWNTINALTVLQSVVRPFQ 175
>08_02_1372 +
26500093-26500154,26500733-26500933,26501858-26501936,
26502652-26502752,26503417-26503516,26503893-26503934,
26504026-26504067,26504352-26504509,26504708-26504780
Length = 285
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +3
Query: 261 LIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQAESMLNES-EHI-A 434
L++S + + K I+D V + + + N + ++L S + L + E L+ S +H+
Sbjct: 124 LVRSKVWNLVK-IRDDVTEKLCMYERNLLGEDLDSLGIKEL---ESLEKQLDSSLKHVRT 179
Query: 435 QRRKEAADMLKALQRAGQIISE 500
R K D L LQR Q++SE
Sbjct: 180 TRTKHLVDQLTELQRKEQMVSE 201
>07_01_0070 +
515247-515397,516198-516265,516360-518456,518750-518900,
519883-520638,520990-521164,521303-521387
Length = 1160
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 10/103 (9%)
Frame = +3
Query: 183 LLPEVPIQTSRKLSEREQHDC-------DVIERLIKSYFYI---VRKSIQDSVPKAVMHF 332
L PE P ++S KL DC D + +L Y +R ++DS+ + F
Sbjct: 126 LFPEKPFKSSPKLKSSSDSDCGVDYYLDDALAKLSAQPSYPTLGIRNLVKDSIYRDTRDF 185
Query: 333 LVNFVKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADM 461
+ + + HL+ +LNE + A + K M
Sbjct: 186 SIRTFTKEAEKD---HLFNCGDPPRILNEPPNSAIQEKNKGTM 225
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +2
Query: 2 DDDHSPVYRHKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASE 181
D SP R + PS PA +G SP+N + P D + + + S
Sbjct: 252 DHGDSPRGRENSRSPSDGYRSPAAANGRSPSPRN--NGSPSPMDNGSRSPRDGNGDGGSR 309
Query: 182 PSARSTDPN 208
+RS P+
Sbjct: 310 GGSRSPRPS 318
>04_04_0517 + 25841292-25842099,25842256-25842308
Length = 286
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 409 CSTSLSTSHSGGRRPPTC 462
CS+ + S S RRPPTC
Sbjct: 207 CSSPAARSRSAARRPPTC 224
>04_03_0761 + 19339944-19340311,19342544-19343084
Length = 302
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 360 QSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQRAGQ 488
QSE V L + Q ++ + + +A++R++ M+ ALQ+ Q
Sbjct: 208 QSEHVRALVRQQQLVALQKQQQMMAEQRQQQQQMMAALQQRQQ 250
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +2
Query: 353 QSAVRARHSPVQV*PGREHAQRV*AHRTAEEGGRRHAKGFTTCRSNHKRDP 505
Q + A H+ Q PG H Q V H GG +HA G + H R P
Sbjct: 25 QQHLHAGHAQEQP-PGHGHGQ-VQRHEHPAHGGAQHAHGGEQLQLAHARTP 73
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 5 DDHSPVYRHKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEP 184
D SP RH+ SPS + + G +SP G+ + PT ++ ++ S S+
Sbjct: 618 DSRSPK-RHREESLSPSKSRRSARAG-SRSPGQHKGSKLSPTRDHHSSRRSRRSRSRSQE 675
Query: 185 SARSTD 202
R++D
Sbjct: 676 KNRNSD 681
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,258,853
Number of Sequences: 37544
Number of extensions: 331040
Number of successful extensions: 1328
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -