Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2077
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related... 148 3e-36
U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related... 148 3e-36
AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-relat... 148 3e-36
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 75 5e-14
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 74 9e-14
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 74 9e-14
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 35 0.051
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 35 0.051
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 35 0.051
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 35 0.051
U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin prote... 33 0.21
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 33 0.21
U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin prote... 33 0.21
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 33 0.21
AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin pro... 33 0.21
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 31 0.48
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 31 0.48
U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical pr... 31 0.83
U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20 pr... 30 1.1
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 29 1.9
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 29 1.9
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 29 2.5
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF047663-3|AAC04452.1| 137|Caenorhabditis elegans Hypothetical ... 28 4.4
AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopam... 28 4.4
AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopam... 28 4.4
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 28 5.9
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 28 5.9
AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical ... 28 5.9
AF022982-5|AAB69936.2| 799|Caenorhabditis elegans Hypothetical ... 28 5.9
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 7.7
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 7.7
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 7.7
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 27 7.7
AC024817-24|AAF59584.3| 237|Caenorhabditis elegans C-type lecti... 27 7.7
>U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related
protein protein1, isoform a protein.
Length = 705
Score = 148 bits (358), Expect = 3e-36
Identities = 71/119 (59%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
Frame = +3
Query: 168 QKPVNLLPEVP-IQTSRKLSEREQHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNF 344
++ N LPEVP Q RKL+ REQ D +IERLI++YF IVRK+IQDSVPKA+M LVNF
Sbjct: 587 KQSANFLPEVPETQLGRKLTSREQRDVAIIERLIRNYFIIVRKNIQDSVPKAIMALLVNF 646
Query: 345 VKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQRAGQIISEIRETHMW 521
V+DNLQSELV LYK D+ + +L E+E +AQRR++ + +KALQ+A IISE+RET +W
Sbjct: 647 VRDNLQSELVRQLYKPDEMDDLLAETEDMAQRRRDTLETMKALQQASVIISEVRETQVW 705
>U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related
protein protein1, isoform b protein.
Length = 712
Score = 148 bits (358), Expect = 3e-36
Identities = 71/119 (59%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
Frame = +3
Query: 168 QKPVNLLPEVP-IQTSRKLSEREQHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNF 344
++ N LPEVP Q RKL+ REQ D +IERLI++YF IVRK+IQDSVPKA+M LVNF
Sbjct: 594 KQSANFLPEVPETQLGRKLTSREQRDVAIIERLIRNYFIIVRKNIQDSVPKAIMALLVNF 653
Query: 345 VKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQRAGQIISEIRETHMW 521
V+DNLQSELV LYK D+ + +L E+E +AQRR++ + +KALQ+A IISE+RET +W
Sbjct: 654 VRDNLQSELVRQLYKPDEMDDLLAETEDMAQRRRDTLETMKALQQASVIISEVRETQVW 712
>AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-related
protein protein.
Length = 705
Score = 148 bits (358), Expect = 3e-36
Identities = 71/119 (59%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
Frame = +3
Query: 168 QKPVNLLPEVP-IQTSRKLSEREQHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNF 344
++ N LPEVP Q RKL+ REQ D +IERLI++YF IVRK+IQDSVPKA+M LVNF
Sbjct: 587 KQSANFLPEVPETQLGRKLTSREQRDVAIIERLIRNYFIIVRKNIQDSVPKAIMALLVNF 646
Query: 345 VKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQRAGQIISEIRETHMW 521
V+DNLQSELV LYK D+ + +L E+E +AQRR++ + +KALQ+A IISE+RET +W
Sbjct: 647 VRDNLQSELVRQLYKPDEMDDLLAETEDMAQRRRDTLETMKALQQASVIISEVRETQVW 705
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 74.5 bits (175), Expect = 5e-14
Identities = 35/90 (38%), Positives = 57/90 (63%)
Frame = +3
Query: 234 QHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQAESML 413
+ + I L+ SY I+ K+I+D VPKAVMH +VN + ++ EL+ HLY+ ++++
Sbjct: 650 ERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLAHLYQCGDTDALM 709
Query: 414 NESEHIAQRRKEAADMLKALQRAGQIISEI 503
ES+ AQ+R+E M A + A +IISE+
Sbjct: 710 EESQIEAQKREEMLRMYHACKEALRIISEV 739
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 74.5 bits (175), Expect = 5e-14
Identities = 35/90 (38%), Positives = 57/90 (63%)
Frame = +3
Query: 234 QHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQAESML 413
+ + I L+ SY I+ K+I+D VPKAVMH +VN + ++ EL+ HLY+ ++++
Sbjct: 650 ERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLAHLYQCGDTDALM 709
Query: 414 NESEHIAQRRKEAADMLKALQRAGQIISEI 503
ES+ AQ+R+E M A + A +IISE+
Sbjct: 710 EESQIEAQKREEMLRMYHACKEALRIISEV 739
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 73.7 bits (173), Expect = 9e-14
Identities = 35/90 (38%), Positives = 56/90 (62%)
Frame = +3
Query: 234 QHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQAESML 413
+ + I L+ SY I+ K+I+D VPKAVMH +VN + ++ EL+ HLY+ ++++
Sbjct: 650 ERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLAHLYQCGDTDALM 709
Query: 414 NESEHIAQRRKEAADMLKALQRAGQIISEI 503
ES+ AQ+R+E M A + A IISE+
Sbjct: 710 EESQIEAQKREEMLRMYHACKEALPIISEV 739
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 73.7 bits (173), Expect = 9e-14
Identities = 35/90 (38%), Positives = 56/90 (62%)
Frame = +3
Query: 234 QHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQAESML 413
+ + I L+ SY I+ K+I+D VPKAVMH +VN + ++ EL+ HLY+ ++++
Sbjct: 650 ERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLAHLYQCGDTDALM 709
Query: 414 NESEHIAQRRKEAADMLKALQRAGQIISEI 503
ES+ AQ+R+E M A + A IISE+
Sbjct: 710 EESQIEAQKREEMLRMYHACKEALPIISEV 739
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 34.7 bits (76), Expect = 0.051
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +2
Query: 2 DDDHSPVYRHKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASE 181
D SP + K+P S + +V + T EKSP+ + PT + ++ + TD E
Sbjct: 1629 DKPKSPTKKEKSPEKSATEDVKSPTK-KEKSPEKVEEKPTSPTKKESSPTKKTD-DEVKS 1686
Query: 182 PSARSTDP 205
P+ + P
Sbjct: 1687 PTKKEKSP 1694
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 14 SPVYRHKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSAR 193
SP + K+P S + + + EKSP+ + PT + + ++ ++ SE +
Sbjct: 1541 SPTKKDKSPEKSITEEIKSPVK-KEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVK 1599
Query: 194 S 196
S
Sbjct: 1600 S 1600
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 34.7 bits (76), Expect = 0.051
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +2
Query: 2 DDDHSPVYRHKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASE 181
D SP + K+P S + +V + T EKSP+ + PT + ++ + TD E
Sbjct: 1629 DKPKSPTKKEKSPEKSATEDVKSPTK-KEKSPEKVEEKPTSPTKKESSPTKKTD-DEVKS 1686
Query: 182 PSARSTDP 205
P+ + P
Sbjct: 1687 PTKKEKSP 1694
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 14 SPVYRHKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSAR 193
SP + K+P S + + + EKSP+ + PT + + ++ ++ SE +
Sbjct: 1541 SPTKKDKSPEKSITEEIKSPVK-KEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVK 1599
Query: 194 S 196
S
Sbjct: 1600 S 1600
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 34.7 bits (76), Expect = 0.051
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +2
Query: 2 DDDHSPVYRHKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASE 181
D SP + K+P S + +V + T EKSP+ + PT + ++ + TD E
Sbjct: 1629 DKPKSPTKKEKSPEKSATEDVKSPTK-KEKSPEKVEEKPTSPTKKESSPTKKTD-DEVKS 1686
Query: 182 PSARSTDP 205
P+ + P
Sbjct: 1687 PTKKEKSP 1694
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 14 SPVYRHKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSAR 193
SP + K+P S + + + EKSP+ + PT + + ++ ++ SE +
Sbjct: 1541 SPTKKDKSPEKSITEEIKSPVK-KEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVK 1599
Query: 194 S 196
S
Sbjct: 1600 S 1600
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 34.7 bits (76), Expect = 0.051
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +2
Query: 2 DDDHSPVYRHKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASE 181
D SP + K+P S + +V + T EKSP+ + PT + ++ + TD E
Sbjct: 1629 DKPKSPTKKEKSPEKSATEDVKSPTK-KEKSPEKVEEKPTSPTKKESSPTKKTD-DEVKS 1686
Query: 182 PSARSTDP 205
P+ + P
Sbjct: 1687 PTKKEKSP 1694
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 14 SPVYRHKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSAR 193
SP + K+P S + + + EKSP+ + PT + + ++ ++ SE +
Sbjct: 1541 SPTKKDKSPEKSITEEIKSPVK-KEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVK 1599
Query: 194 S 196
S
Sbjct: 1600 S 1600
>U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin protein
1, isoform a protein.
Length = 953
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 35 TPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSARSTDP 205
T P+P P T E + + S +T ++ + DSS S PS RST P
Sbjct: 347 TTSPAPPPTSTTPTSRREANMERFSRHTHAHANRLYSTDDDDDSSPESRPSTRSTSP 403
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 35 TPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSARSTDP 205
T P+P P T E + + S +T ++ + DSS S PS RST P
Sbjct: 422 TTSPAPPPTSTTPTSRREANMERFSRHTHAHANRLYSTDDDDDSSPESRPSTRSTSP 478
>U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin protein
1, isoform c protein.
Length = 962
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 35 TPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSARSTDP 205
T P+P P T E + + S +T ++ + DSS S PS RST P
Sbjct: 356 TTSPAPPPTSTTPTSRREANMERFSRHTHAHANRLYSTDDDDDSSPESRPSTRSTSP 412
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
1, isoform d protein.
Length = 1106
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 35 TPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSARSTDP 205
T P+P P T E + + S +T ++ + DSS S PS RST P
Sbjct: 500 TTSPAPPPTSTTPTSRREANMERFSRHTHAHANRLYSTDDDDDSSPESRPSTRSTSP 556
>AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin
protein.
Length = 953
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 35 TPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSARSTDP 205
T P+P P T E + + S +T ++ + DSS S PS RST P
Sbjct: 347 TTSPAPPPTSTTPTSRREANMERFSRHTHAHANRLYSTDDDDDSSPESRPSTRSTSP 403
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 105 SAETPSTPQINGMPDNKALTPQKPVNLLPEVPIQTSRKLSEREQH 239
S TP TPQ GMP + TPQ VP + +++QH
Sbjct: 119 SQGTPMTPQSAGMPGSNCGTPQSAGGPPTSVPYDYQQAQMQQQQH 163
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 105 SAETPSTPQINGMPDNKALTPQKPVNLLPEVPIQTSRKLSEREQH 239
S TP TPQ GMP + TPQ VP + +++QH
Sbjct: 117 SQGTPMTPQSAGMPGSNCGTPQSAGGPPTSVPYDYQQAQMQQQQH 161
>U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical
protein C04G6.4 protein.
Length = 418
Score = 30.7 bits (66), Expect = 0.83
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +2
Query: 26 RHKTPRPSPSPNVPAITDGHEKSPQNIS---GNTVD-PTDQRNARQQGTDSSEASEPSAR 193
R K+ P+P P+VPA+T G +P + S G ++ P++ A + E +PS+
Sbjct: 76 RPKSVSPNPHPDVPAVTVGALSAPADKSETEGEKIEKPSETAQAHVENVKKPE--KPSSL 133
Query: 194 STDP 205
T P
Sbjct: 134 GTHP 137
>U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20
protein family) homologprotein 1 protein.
Length = 507
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 120 STPQINGMPDNKA-LTPQKPVNLLPEVPIQTSRKLSER-EQHDCDVIERLIKSYFYIVRK 293
S+ Q NG+ K +TP + NLLP R L R +Q + D L+ S Y ++
Sbjct: 17 SSAQQNGLTMRKRDMTPTRNTNLLPNATFVGDRFLGVRLDQDELDHANHLMTSKLYSNKE 76
Query: 294 SIQDSV 311
++ +S+
Sbjct: 77 NLNNSM 82
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 12 TVPSIDTRLPGLLPHRMFPL*PMVTRNLHKTSAETPSTPQINGMPDNK 155
TVPSI +R+ +L H FPL +++ PST G+P K
Sbjct: 85 TVPSIPSRISFVLLHSAFPLISNYLIQKAESTLTHPSTESFLGIPIRK 132
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 86 EKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSARSTDPN 208
EK + SG+ + + + A+ + D+ + EPSA S+DP+
Sbjct: 690 EKPEGSSSGSATEKSKEIEAKSKKDDTKKPLEPSAASSDPS 730
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +3
Query: 231 EQHDCDVIERLIKSYFY-IVRKSIQ-DSVPKAVM---HFLVNFVKDNL 359
E+H VI R I YF+ I +KSI + VP + H+L+N ++NL
Sbjct: 17 EKHWKSVIHRSICDYFFDIQKKSIHPEDVPPIISTPHHYLINVYQNNL 64
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +2
Query: 2 DDDHSPVYR----HKTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSS 169
DD+ PV + TP+P+ + +++P + P + +DSS
Sbjct: 410 DDEKKPVAKPTSAKATPKPAAKKADSSSDSSDDEAPAKKTPAKAAPKPASKKAESSSDSS 469
Query: 170 EASEPSARSTDPNI 211
+ +P+A+ST I
Sbjct: 470 DDEKPAAKSTPAKI 483
>Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical
protein K09G1.4b protein.
Length = 840
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 34 DSQAFSLTECSRYNRWSREISTKHQRKHRRPHRSTECQTTR 156
D +++S+ R+ SR STKH RK + +R +R
Sbjct: 460 DGRSYSIKGQKRFRNLSRNYSTKHHRKVVKVNRGNSRNNSR 500
>Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical
protein K09G1.4a protein.
Length = 705
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 34 DSQAFSLTECSRYNRWSREISTKHQRKHRRPHRSTECQTTR 156
D +++S+ R+ SR STKH RK + +R +R
Sbjct: 325 DGRSYSIKGQKRFRNLSRNYSTKHHRKVVKVNRGNSRNNSR 365
>AF047663-3|AAC04452.1| 137|Caenorhabditis elegans Hypothetical
protein W09G12.9 protein.
Length = 137
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +2
Query: 41 RPSPSPNVPAITDGHEKSPQNISGNTVDPT------DQRNARQQGTDSSEASEPSARSTD 202
R S P +P ++ E S N + + ++ T ++R ARQQ S ++ S R D
Sbjct: 38 RSSQPPILPTVSRIEEPSCTNDAFDAIEDTSARKIEERRRARQQALQYSPRADLSLRKID 97
Query: 203 PNI 211
P I
Sbjct: 98 PEI 100
>AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopamine
receptor shortvariant protein.
Length = 705
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 34 DSQAFSLTECSRYNRWSREISTKHQRKHRRPHRSTECQTTR 156
D +++S+ R+ SR STKH RK + +R +R
Sbjct: 325 DGRSYSIKGQKRFRNLSRNYSTKHHRKVVKVNRGNSRNNSR 365
>AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopamine
receptor longvariant protein.
Length = 840
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 34 DSQAFSLTECSRYNRWSREISTKHQRKHRRPHRSTECQTTR 156
D +++S+ R+ SR STKH RK + +R +R
Sbjct: 460 DGRSYSIKGQKRFRNLSRNYSTKHHRKVVKVNRGNSRNNSR 500
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 11/67 (16%)
Frame = +2
Query: 35 TPRPSPSPNVPAITDGHEKS-----------PQNISGNTVDPTDQRNARQQGTDSSEASE 181
TP SP P++P+ + G + P+ +SGN ++ N T + S
Sbjct: 416 TPFDSPPPSMPSTSSGPSGALAPPPPPSHPIPRRVSGNGWPEENKENGTSTSTTNGAQSV 475
Query: 182 PSARSTD 202
P+A TD
Sbjct: 476 PAAAGTD 482
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 11/67 (16%)
Frame = +2
Query: 35 TPRPSPSPNVPAITDGHEKS-----------PQNISGNTVDPTDQRNARQQGTDSSEASE 181
TP SP P++P+ + G + P+ +SGN ++ N T + S
Sbjct: 444 TPFDSPPPSMPSTSSGPSGALAPPPPPSHPIPRRVSGNGWPEENKENGTSTSTTNGAQSV 503
Query: 182 PSARSTD 202
P+A TD
Sbjct: 504 PAAAGTD 510
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 11/67 (16%)
Frame = +2
Query: 35 TPRPSPSPNVPAITDGHEKS-----------PQNISGNTVDPTDQRNARQQGTDSSEASE 181
TP SP P++P+ + G + P+ +SGN ++ N T + S
Sbjct: 416 TPFDSPPPSMPSTSSGPSGALAPPPPPSHPIPRRVSGNGWPEENKENGTSTSTTNGAQSV 475
Query: 182 PSARSTD 202
P+A TD
Sbjct: 476 PAAAGTD 482
>AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical
protein B0546.2 protein.
Length = 436
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 29 HKTPRPSPSPNV----PAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSAR 193
+K+P PS SP + P I +SP N N+ D + +N R ++ ++ +AR
Sbjct: 75 NKSPIPSSSPVLPPPQPEIEPNRSQSPGNADYNSDDEYEMQNIRDDEIETEFSNRLAAR 133
>AF022982-5|AAB69936.2| 799|Caenorhabditis elegans Hypothetical
protein T23B12.4 protein.
Length = 799
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 50 PSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSE 172
P+P+ A ++ EK Q + D TDQ + G D E
Sbjct: 264 PTPSSEAKSETTEKKEQKSNDEATDETDQNDDENVGDDEDE 304
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 38 PRPSPSPNVPAITDGHEKSPQNISGNTV-DPTDQRNARQQGTDSS 169
P P+ S P DG P + SGN V P+D+ A++ TD S
Sbjct: 3900 PIPTDSSGKPLSADG-SPLPTDASGNYVLVPSDEVTAKELSTDES 3943
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 38 PRPSPSPNVPAITDGHEKSPQNISGNTV-DPTDQRNARQQGTDSS 169
P P+ S P DG P + SGN V P+D+ A++ TD S
Sbjct: 3945 PIPTDSSGKPLSADG-SPLPTDASGNYVLVPSDEVTAKELSTDES 3988
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 38 PRPSPSPNVPAITDGHEKSPQNISGNTV-DPTDQRNARQQGTDSS 169
P P+ S P DG P + SGN V P+D+ A++ TD S
Sbjct: 3945 PIPTDSSGKPLSADG-SPLPTDASGNYVLVPSDEVTAKELSTDES 3988
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 117 PSTPQINGMPDNKALTPQKPVNLLPEVP 200
P P + GMP N PQ+P L+ P
Sbjct: 108 PGKPGVPGMPGNPGKPPQQPCELVTPPP 135
>AC024817-24|AAF59584.3| 237|Caenorhabditis elegans C-type lectin
protein 83 protein.
Length = 237
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 113 NTVDPTDQRNARQQGTDSSEASEPSARSTDP 205
NT PTD +A TDSS +S P+ ST P
Sbjct: 197 NTYGPTDS-SASPYPTDSSTSSYPTDSSTSP 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,493,662
Number of Sequences: 27780
Number of extensions: 273957
Number of successful extensions: 1240
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -