Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2077
(600 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identic... 89 3e-18
At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identic... 89 3e-18
At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identic... 86 2e-17
At2g44590.1 68415.m05549 dynamin-like protein D (DL1D) identical... 36 0.020
At2g44590.3 68415.m05551 dynamin-like protein D (DL1D) identical... 33 0.11
At2g44590.2 68415.m05550 dynamin-like protein D (DL1D) identical... 33 0.11
At5g38560.1 68418.m04662 protein kinase family protein contains ... 33 0.19
At1g10290.1 68414.m01159 dynamin-like protein 6 (ADL6) identical... 33 0.19
At2g01650.1 68415.m00091 zinc finger (C2H2 type) family protein ... 32 0.25
At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive eff... 32 0.33
At1g14830.1 68414.m01774 dynamin-like protein C (DL1C) nearly id... 32 0.33
At5g42490.1 68418.m05172 kinesin motor family protein contains P... 31 0.44
At1g59610.1 68414.m06704 dynamin-like protein, putative (ADL3) s... 31 0.44
At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:4... 31 0.44
At4g14220.1 68417.m02194 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At5g19960.1 68418.m02376 RNA recognition motif (RRM)-containing ... 29 1.8
At4g34040.1 68417.m04830 zinc finger (C3HC4-type RING finger) fa... 29 1.8
At5g05750.1 68418.m00633 DNAJ heat shock N-terminal domain-conta... 29 2.4
At3g32410.1 68416.m04144 transcriptional repressor-related conta... 29 2.4
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 29 3.1
At5g16560.1 68418.m01938 myb family transcription factor (KAN1) ... 29 3.1
At3g58160.1 68416.m06485 myosin heavy chain, putative similar to... 29 3.1
At1g80420.2 68414.m09416 DNA repair protein, putative (XRCC1) id... 28 4.1
At1g80420.1 68414.m09415 DNA repair protein, putative (XRCC1) id... 28 4.1
At3g10290.1 68416.m01233 phosphate translocator-related low simi... 28 5.4
At2g32930.1 68415.m04037 zinc finger (CCCH-type) family protein ... 28 5.4
At5g15890.1 68418.m01859 expressed protein 27 7.2
At4g08630.1 68417.m01420 expressed protein ; expression supporte... 27 7.2
At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:4... 27 7.2
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 27 7.2
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 27 9.5
At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1) domain... 27 9.5
At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containi... 27 9.5
At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1 (MSH... 25 9.5
>At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/105 (37%), Positives = 68/105 (64%)
Frame = +3
Query: 189 PEVPIQTSRKLSEREQHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSE 368
P +++S SE+E + ++ + L+KSY+ IVRK+++D VPKA+MHFLVN+ K L +
Sbjct: 636 PPTILKSSETHSEQESVEIEITKLLLKSYYDIVRKNVEDLVPKAIMHFLVNYTKRELHNV 695
Query: 369 LVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQRAGQIISEI 503
+ LY+ + E +L E + +A +RK + L+ LQ+A + + E+
Sbjct: 696 FIEKLYRENLIEELLKEPDELAIKRKRTQETLRILQQANRTLDEL 740
>At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/105 (37%), Positives = 68/105 (64%)
Frame = +3
Query: 189 PEVPIQTSRKLSEREQHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSE 368
P +++S SE+E + ++ + L+KSY+ IVRK+++D VPKA+MHFLVN+ K L +
Sbjct: 636 PPTILKSSETHSEQESVEIEITKLLLKSYYDIVRKNVEDLVPKAIMHFLVNYTKRELHNV 695
Query: 369 LVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQRAGQIISEI 503
+ LY+ + E +L E + +A +RK + L+ LQ+A + + E+
Sbjct: 696 FIEKLYRENLIEELLKEPDELAIKRKRTQETLRILQQANRTLDEL 740
>At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identical
to dynamin like protein 2a (ADL2a) [Arabidopsis
thaliana] GI:19032337; supported by cDNA gi:19032336
Length = 808
Score = 85.8 bits (203), Expect = 2e-17
Identities = 41/105 (39%), Positives = 65/105 (61%)
Frame = +3
Query: 189 PEVPIQTSRKLSEREQHDCDVIERLIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSE 368
P ++ + SE+E + + + L++SY+ IVRK+I+DSVPKA+MHFLVN K L +
Sbjct: 652 PPAVLRPTETHSEQEAVEIQITKLLLRSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNV 711
Query: 369 LVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQRAGQIISEI 503
+ LY+ + E ML E + IA +RK + L LQ+A + + E+
Sbjct: 712 FIKKLYRENLFEEMLQEPDEIAVKRKRTQETLHVLQQAYRTLDEL 756
>At2g44590.1 68415.m05549 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 596
Score = 35.9 bits (79), Expect = 0.020
Identities = 19/76 (25%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +3
Query: 264 IKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQAE---SMLNESEHIA 434
+ +Y +V +++ +++PKAV+H V K +L + + +S Q + +L+E+ +
Sbjct: 510 VAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQQGKRLGQLLDENPALM 569
Query: 435 QRRKEAADMLKALQRA 482
+RR + A L+ ++A
Sbjct: 570 ERRMQCAKRLELYKKA 585
>At2g44590.3 68415.m05551 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 612
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/75 (24%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 264 IKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSD--QAESMLNESEHIAQ 437
+ +Y +V +++ +++PKAV+H V K +L + + +S + +L+E+ + +
Sbjct: 527 VAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENPALME 586
Query: 438 RRKEAADMLKALQRA 482
RR + A L+ ++A
Sbjct: 587 RRMQCAKRLELYKKA 601
>At2g44590.2 68415.m05550 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 595
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/75 (24%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 264 IKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSD--QAESMLNESEHIAQ 437
+ +Y +V +++ +++PKAV+H V K +L + + +S + +L+E+ + +
Sbjct: 510 VAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENPALME 569
Query: 438 RRKEAADMLKALQRA 482
RR + A L+ ++A
Sbjct: 570 RRMQCAKRLELYKKA 584
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 14 SPVYRHKTPRPSPSP--NVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPS 187
+P + P+PSPSP P+ G SP S +T PT ++ AS PS
Sbjct: 127 APTTTNPPPKPSPSPPGETPS-PPGETPSPPKPSPST--PTPTTTTSPPPPPATSASPPS 183
Query: 188 ARSTDPN 208
+ TDP+
Sbjct: 184 SNPTDPS 190
>At1g10290.1 68414.m01159 dynamin-like protein 6 (ADL6) identical to
dynamin-like protein 6 (ADL6) [Arabidopsis thaliana]
GI:6651399; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain, PF00169: PH domain
Length = 914
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/63 (25%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 264 IKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHL--YKSDQAESMLNESEHIAQ 437
++ Y V S+ +VPKAV+ V K+++ ++L + + +++ ES++ E +++ +
Sbjct: 737 VRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQEDQNVKR 796
Query: 438 RRK 446
RR+
Sbjct: 797 RRE 799
>At2g01650.1 68415.m00091 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 458
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 35 TPRPSPSPNVPAITDGHEKSPQNISGNTVDPT-DQRNARQQGTD 163
TPRP P+PN P S Q ISG+T +P D A Q G D
Sbjct: 58 TPRPKPNPN-PLPEKPLSSSDQKISGSTRNPDHDPVRAPQDGFD 100
>At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1311
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 51 PHRM-FPL*PMVTRNLHKTSAETPSTPQINGMPDNKALTPQKPVNL 185
P R FP P+VTR + ++ A P+ Q G+P + QKP+++
Sbjct: 247 PRRQNFPQ-PVVTRTVRESRAGPPTAEQAGGVPGHVVYRDQKPIDI 291
>At1g14830.1 68414.m01774 dynamin-like protein C (DL1C) nearly
identical to dynamin-like protein C [Arabidopsis
thaliana] GI:19569772
Length = 614
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/82 (23%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +3
Query: 264 IKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQAE--SMLNESEHIAQ 437
+ +Y +V ++++S+PKAV++ V K +L + + + ++ + +ML+E + +
Sbjct: 530 VSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLME 589
Query: 438 RRKEAADMLKALQRAGQIISEI 503
RR A L+ ++A I +
Sbjct: 590 RRGTLAKRLELYKQARDDIDAV 611
>At5g42490.1 68418.m05172 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1087
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +2
Query: 32 KTPRPSPSPNVPAIT-DGHEKS---PQNISGNTVDPTDQRNARQQGTDSSEASEP 184
KT R P PA + G+E + PQ+I+ T D T+ ++ R+Q DS E ++P
Sbjct: 831 KTERMEIRPESPADSVRGNENALPNPQDINKETTDATNNQSQREQVGDSVEEAKP 885
>At1g59610.1 68414.m06704 dynamin-like protein, putative (ADL3)
strong similarity to dynamin-like protein 6 (ADL6)
[Arabidopsis thaliana] GI:6651399; contains Pfam
profiles PF01031: Dynamin central region, PF00350:
Dynamin family, PF02212: Dynamin GTPase effector domain,
PF00169: PH domain; identical to cDNA dynamin-like
protein ADL3, GI:4803835
Length = 920
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/62 (25%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +3
Query: 264 IKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHL--YKSDQAESMLNESEHIAQ 437
++ Y V S+ +VPKAV+ V K+++ ++L + + +++ ES++ E +++ +
Sbjct: 744 VRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIESLIQEDQNVKR 803
Query: 438 RR 443
RR
Sbjct: 804 RR 805
>At1g17580.1 68414.m02165 myosin, putative similar to myosin
GI:433663 from (Arabidopsis thaliana)
Length = 1520
Score = 31.5 bits (68), Expect = 0.44
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 330 FLVNFVKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQ-RAGQIISEIR 506
F +NF + LQ H++K +Q E E + D+L+ ++ + G IIS +
Sbjct: 446 FCINFTNEKLQQHFNQHVFKMEQEEYTKEEIAWSYIEFIDNQDVLELIEKKPGGIISLLD 505
Query: 507 ETHMWXWSSXERXS 548
E M+ S+ E S
Sbjct: 506 EACMFPKSTHETFS 519
>At4g14220.1 68417.m02194 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 371
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 23 YRHKTPRPSPSPNVPAITDGHEKSP-QNISGNTVDPTDQRNARQQGTDSSEAS 178
+++ P PSP P+ GH P + +G+ + P + Q S EAS
Sbjct: 199 HQNSNPCPSPGSMTPSPVSGHSSIPADSNNGSRISPGPSPSRSSQSPKSPEAS 251
>At5g19960.1 68418.m02376 RNA recognition motif (RRM)-containing
protein low similarity to glycine-rich RNA-binding
protein [Euphorbia esula] GI:2645699; contains
INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA
recognition motif) (RRM) domain
Length = 337
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +3
Query: 285 VRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQAESML-NESEHIAQRRKEAADM 461
+R++++D V VM + VK+ + SEL KS + E +L NE + ++QRRKE A +
Sbjct: 239 MREALRDEV--MVMEERLE-VKEVVCSELQK---KSKRLEDLLINEKKLVSQRRKELAKL 292
Query: 462 LKALQRAGQIISEIRE 509
K+ R + +++
Sbjct: 293 HKSYSRVRECTDNLKD 308
>At4g34040.1 68417.m04830 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 666
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 75 PMVTRNLHKTSAETPSTPQINGMPDNKALTPQKPVNLLPEVPIQTS 212
P +TRN+H+ + S+ + N MP+ + L+P + E P+ T+
Sbjct: 335 PALTRNIHQFAWSASSSSRANSMPE-EGLSPWDAPRINSEQPVFTT 379
>At5g05750.1 68418.m00633 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 Mus musculus; contains
Pfam profile PF00226 DnaJ domain
Length = 294
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 86 EKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSARST 199
E SP + + + P+D+ + RQ+G+ SS A S+ S+
Sbjct: 61 EDSPGSAANESSKPSDRPSLRQRGSSSSAAGSSSSSSS 98
>At3g32410.1 68416.m04144 transcriptional repressor-related contains
weak similarity to Swiss-Prot:Q9Y4X4 krueppel-like
factor 12 (Transcriptional repressor AP-2rep) (HSPC122)
[Homo sapiens]
Length = 232
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 99 KTSAETPSTPQINGMPDNKALTPQKPVNLLPEV 197
++++ +P++P I+ +P +TP +P NLL V
Sbjct: 186 ESTSSSPASPSISFLPTLHPMTPSQPKNLLHNV 218
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 330 FLVNFVKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQ-RAGQIISEIR 506
F +NF + LQ H++K +Q + E + D+L+ ++ + G +I+ +
Sbjct: 463 FCINFTNEKLQQHFNQHVFKMEQEDYTKEEINWSYIEFVDNKDVLELIEKKPGGVIALLD 522
Query: 507 ETHMWXWSSXE 539
E M+ S+ E
Sbjct: 523 EACMFPKSTHE 533
>At5g16560.1 68418.m01938 myb family transcription factor (KAN1)
contains Pfam profile: PF00249 myb-like DNA-binding
domain; identical to cDNA GARP-like putative
transcription factor KANADI1 (KAN1) GI:15723590
Length = 403
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 41 RPSPSPNVPAIT-DGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSARSTDP 205
R + N PA + DG + I+GN V + R Q D+S E ST P
Sbjct: 272 RTVKTTNKPAASSDGSGEEEMGINGNEVHHQSSTDQRAQSDDTSLHQETDISSTQP 327
>At3g58160.1 68416.m06485 myosin heavy chain, putative similar to
myosin heavy chain [Arabidopsis thaliana]
gi|602328|emb|CAA84067.
Length = 1242
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 330 FLVNFVKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQ-RAGQIISEIR 506
F +N+ + LQ H++K +Q E E + + D++ ++ + G II+ +
Sbjct: 447 FCINYTNEKLQQHFNQHVFKMEQGEYQKEEIDWSYVEFVDNKDVVDLIEKKPGGIIALLD 506
Query: 507 ETHMWXWSSXERXS 548
E M S+ E S
Sbjct: 507 EACMLPKSTPETFS 520
>At1g80420.2 68414.m09416 DNA repair protein, putative (XRCC1)
identical to putative DNA repair protein XRCC1
[Arabidopsis thaliana] GI:11181954; contains Pfam
domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 353
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 125 PTDQRNARQQGTDSSEASEPSARSTD 202
PT++ N+R ++ SE +EPS+ +T+
Sbjct: 33 PTEEHNSRNAPSNKSEHAEPSSNTTE 58
>At1g80420.1 68414.m09415 DNA repair protein, putative (XRCC1)
identical to putative DNA repair protein XRCC1
[Arabidopsis thaliana] GI:11181954; contains Pfam
domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 353
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 125 PTDQRNARQQGTDSSEASEPSARSTD 202
PT++ N+R ++ SE +EPS+ +T+
Sbjct: 33 PTEEHNSRNAPSNKSEHAEPSSNTTE 58
>At3g10290.1 68416.m01233 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 355
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +2
Query: 62 VPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSARS 196
+P ++ H+K N+S ++ +++N Q+ SS +S P ++
Sbjct: 11 IPLLSFSHQKKQPNLSISSTTKMNKKNPDQKSDMSSSSSSPKKQT 55
>At2g32930.1 68415.m04037 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 453
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 32 KTPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSARSTD 202
+T + SP P ++ + P N S +T P D+ +A + D A S++ D
Sbjct: 391 ETEKQDDSPTEPEKSEVEDSLPPNGSDSTSLPNDKPDAETEKQDDDSAELDSSKVQD 447
>At5g15890.1 68418.m01859 expressed protein
Length = 526
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 35 TPRPSPSPNVPAITDGHEKSPQNISGNTVDPTDQRNARQQGTDSSEASEPSARS 196
+P SP P P ++SP ++G P + + R + S + S P S
Sbjct: 121 SPMNSPVPAPPHRNSSADQSPSPVNGPIPAPLNHTSLRHLNSSSDDHSSPVTTS 174
>At4g08630.1 68417.m01420 expressed protein ; expression supported
by MPSS
Length = 845
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 114 TPSTPQINGMPDNKALTPQKPVNLLPEVPIQTSRKLSEREQHDCDVIERLIKSYFYIVRK 293
T S P I G+P +A+ PQ PV + P + ++ +E ++D + + ++ + I R
Sbjct: 132 TSSRPSI-GLPGGRAMRPQSPV-MTKIAPPRRTQPTNEGNKNDGNDDDDVVSIDYTIGRP 189
Query: 294 SI 299
SI
Sbjct: 190 SI 191
>At1g54560.1 68414.m06222 myosin, putative similar to myosin
GI:433663 from [Arabidopsis thaliana]
Length = 1529
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 330 FLVNFVKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQ-RAGQIISEIR 506
F +NF + LQ H++K +Q E + + D+L ++ + G I++ +
Sbjct: 452 FCINFTNEKLQQHFNQHVFKMEQEEYTKEAIDWSYIEFVDNQDVLDLIEKKPGGIVALLD 511
Query: 507 ETHMWXWSSXE 539
E M+ S+ E
Sbjct: 512 EACMFPKSTHE 522
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 330 FLVNFVKDNLQSELVTHLYKSDQAESMLNESEHIAQRRKEAADMLKALQ-RAGQIISEIR 506
F +NF + LQ H++K +Q E + + D+L ++ + G I++ +
Sbjct: 457 FCINFTNEKLQQHFNQHVFKMEQEEYTKEAIDWSYIEFVDNQDVLDLIEKKPGGIVALLD 516
Query: 507 ETHMWXWSSXE 539
E M+ S+ E
Sbjct: 517 EACMFPKSTHE 527
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Frame = +2
Query: 32 KTPRPSPSPNVPAITDGHEK-----SPQNISGNTVDPTDQRNARQQGTDSSEASEPSARS 196
K +PSP P P+ + K SP+ S T P + + +Q + EA +P
Sbjct: 442 KPQQPSPKPETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPK 501
Query: 197 TDP 205
P
Sbjct: 502 PKP 504
>At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein Pfam profile PF00564: PB1
domain
Length = 720
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = +2
Query: 38 PRP--SPSPNVPAITDGHEKSPQNISGNTVDPTDQRN-ARQQGTDSSEASEPSARSTDPN 208
PRP P P P+++D P N +T+ P N R + E + +T P
Sbjct: 565 PRPYSMPVPQSPSVSDAAGSIPSNHPNSTMMPPPPNNHMRSVSSGKPEMGQAGVYTTAPG 624
Query: 209 I 211
+
Sbjct: 625 V 625
>At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|P46825 Kinesin light chain
(KLC) {Loligo pealeii}; contains Pfam profile PF00515:
TPR Domain
Length = 1797
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 138 GMPDNKALTPQKPVNLLPEVPIQTSRKLSEREQHDCDVIERLIKSYFYIVR 290
G+P+N A TP P N+ P + + L +R +D + F I+R
Sbjct: 777 GIPENVAATPHNPWNVHPLIFRWLEKFLKKRYDYDLNAFSYKDLRKFAILR 827
>At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1
(MSH6-1) (AGAA.3) identical to SP|O04716 DNA mismatch
repair protein MSH6-1 (AtMsh6-1) cress] {Arabidopsis
thaliana}
Length = 1324
Score = 24.6 bits (51), Expect(2) = 9.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 44 PSPSPNVPAITDGHEKSPQNISGNTVDP 127
PSP P+ P+ K P + G T P
Sbjct: 85 PSPGPDTPSPVQSKFKKPLLVIGQTPSP 112
Score = 20.6 bits (41), Expect(2) = 9.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 32 KTPRPSPSP 58
K+P PSPSP
Sbjct: 57 KSPSPSPSP 65
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,702,024
Number of Sequences: 28952
Number of extensions: 250423
Number of successful extensions: 989
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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