Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2066
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 190 8e-49
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 190 8e-49
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 190 8e-49
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 154 3e-38
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 154 3e-38
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 103 6e-23
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 85 2e-17
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 4e-14
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 64 5e-11
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 64 5e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 52 4e-07
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 45 4e-05
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 43 1e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 41 5e-04
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 41 5e-04
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.004
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.034
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.10
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 33 0.18
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 32 0.24
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 1.7
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 2.9
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 29 2.9
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 29 2.9
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 27 6.7
U58764-4|AAB00726.2| 216|Caenorhabditis elegans Hypothetical pr... 27 6.7
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 27 6.7
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 27 6.7
Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical pr... 27 8.9
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 8.9
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 517 YF 522
F
Sbjct: 348 IF 349
Score = 189 bits (460), Expect = 1e-48
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLIGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 423
Query: 517 YF 522
F
Sbjct: 424 IF 425
Score = 187 bits (456), Expect = 4e-48
Identities = 96/122 (78%), Positives = 101/122 (82%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 499
Query: 517 YF 522
F
Sbjct: 500 IF 501
Score = 95.5 bits (227), Expect = 2e-20
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 297
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 517 YF 522
F
Sbjct: 348 IF 349
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 517 YF 522
F
Sbjct: 576 IF 577
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 651
Query: 517 YF 522
F
Sbjct: 652 IF 653
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 727
Query: 517 YF 522
F
Sbjct: 728 IF 729
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 803
Query: 517 YF 522
F
Sbjct: 804 IF 805
Score = 189 bits (460), Expect = 1e-48
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLIGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 423
Query: 517 YF 522
F
Sbjct: 424 IF 425
Score = 187 bits (456), Expect = 4e-48
Identities = 96/122 (78%), Positives = 101/122 (82%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 499
Query: 517 YF 522
F
Sbjct: 500 IF 501
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 821 IQKESTLHLVLRLRGG 836
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 517 YF 522
F
Sbjct: 348 IF 349
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 423
Query: 517 YF 522
F
Sbjct: 424 IF 425
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 499
Query: 517 YF 522
F
Sbjct: 500 IF 501
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 517 YF 522
F
Sbjct: 576 IF 577
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 651
Query: 517 YF 522
F
Sbjct: 652 IF 653
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 727
Query: 517 YF 522
F
Sbjct: 728 IF 729
Score = 190 bits (462), Expect = 8e-49
Identities = 97/122 (79%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRL 803
Query: 517 YF 522
F
Sbjct: 804 IF 805
Score = 153 bits (370), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 337 IQKESTLHLVLRLRGG 384
IQK+STLHLVLRLRGG
Sbjct: 821 IQKQSTLHLVLRLRGG 836
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 154 bits (374), Expect = 3e-38
Identities = 75/77 (97%), Positives = 76/77 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 337 IQKESTLHLVLRLRGGM 387
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 385 MQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRXYF 522
MQIFVK K +L + + + N + IQDKEG PPDQQR F
Sbjct: 1 MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIF 45
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 154 bits (374), Expect = 3e-38
Identities = 75/77 (97%), Positives = 76/77 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 337 IQKESTLHLVLRLRGGM 387
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 385 MQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRXYF 522
MQIFVK K +L + + + N + IQDKEG PPDQQR F
Sbjct: 1 MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIPPDQQRLIF 45
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 103 bits (248), Expect = 6e-23
Identities = 47/76 (61%), Positives = 59/76 (77%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
M I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 337 IQKESTLHLVLRLRGG 384
+ S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 85.4 bits (202), Expect = 2e-17
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 337 IQKESTLHLVLRLR 378
I+ E +HLV R R
Sbjct: 221 IRDEDIIHLVSRHR 234
Score = 57.2 bits (132), Expect = 7e-09
Identities = 37/124 (29%), Positives = 62/124 (50%)
Frame = +1
Query: 151 IIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 330
++ + +TG IT VE SD I+++ K+ + + P ++ +D RT+SD
Sbjct: 89 VVFTVSYGEVTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISD 142
Query: 331 YNIQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQ 510
YNI+ STL L + ++ + + VK K + K + + +Q+K G PPDQQ
Sbjct: 143 YNIKNGSTLRLEVPVKEKLTVSVKTLFGKTIPI-SIKNTDTVETLKFKVQNKHGVPPDQQ 201
Query: 511 RXYF 522
R F
Sbjct: 202 RLIF 205
Score = 33.9 bits (74), Expect = 0.077
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 264
M + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 59 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 4e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 267
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 385 MQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXP 498
MQIFVK K +L + + + N + IQDKEG P
Sbjct: 1 MQIFVKTLTGKTITL-EVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 64.5 bits (150), Expect = 5e-11
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Frame = +1
Query: 163 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 342
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 343 KESTLHLVLRLRGG-----MQIFVKPPDRKR 420
E+T+++ L L GG +++ P KR
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKKNKR 87
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 64.5 bits (150), Expect = 5e-11
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Frame = +1
Query: 163 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 342
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 343 KESTLHLVLRLRGG-----MQIFVKPPDRKR 420
E+T+++ L L GG +++ P KR
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKKNKR 87
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 57.6 bits (133), Expect = 5e-09
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +1
Query: 160 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 339
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 340 QKESTLHLVLR 372
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLS 327
++I+V+ G+T TL+ SDT+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 328 DYNIQKESTLHLVLRLRGGMQIFVK 402
D + + STL L + + + +FVK
Sbjct: 162 DNSFENGSTLRLEVSIEKEIDVFVK 186
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 264
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEV 207
+ +FVKT TGKTIT+ +
Sbjct: 181 IDVFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = +1
Query: 160 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 339
Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 340 QKESTLHLVLRL 375
ST+ L R+
Sbjct: 99 SNNSTMDLHFRI 110
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +1
Query: 163 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 300
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +1
Query: 181 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 360
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 361 L 363
L
Sbjct: 241 L 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = +1
Query: 178 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 357
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 358 HLVLRLRGG 384
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = +1
Query: 178 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 357
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 358 HLVLRLRGG 384
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 40.7 bits (91), Expect = 7e-04
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Frame = +1
Query: 13 VKIXC-FSTP----FCFI*KTKLIIFARSNSVLCS*LFDIQLTKRNYCIF*IIMQIFVKT 177
V+I C F TP FCF+ LI+F + + CS + Q+ +++ + +T
Sbjct: 12 VQIMCAFKTPSHFLFCFL---PLILFFKMVFLFCS-FINNQM---------MVLSVTFRT 58
Query: 178 LTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKES 351
LT LE+ TI VKA + ++G P+ Q+LI+ GK L+D + +
Sbjct: 59 LTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGEVGFDSSK 118
Query: 352 TLHLVLRLR 378
+ ++L R
Sbjct: 119 FVVVMLSKR 127
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +1
Query: 199 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 378
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 199 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 357
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.034
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = +1
Query: 175 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 354
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 355 LHLVLR 372
+ L++R
Sbjct: 207 VELLVR 212
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.10
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +1
Query: 172 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 351
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 352 TLHLV 366
+ L+
Sbjct: 73 QIMLL 77
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 337 IQKESTLHLVLR 372
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 337 IQKESTLHLVLR 372
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 178 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 357
L G I +E++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/53 (20%), Positives = 29/53 (54%)
Frame = +1
Query: 154 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 312
++Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1148 VLQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 333
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 334 NIQK 345
IQ+
Sbjct: 56 KIQE 59
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 169 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 267
+ TL G+TI V P + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 154 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 294
+M +TLTG I + EP + KA +Q E P + QR++ A
Sbjct: 538 VMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 154 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 294
+M +TLTG I + EP + KA +Q E P + QR++ A
Sbjct: 538 VMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 199 LEVEPSDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 363
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -1
Query: 343 FECCSLTRCVRLPAACQQR*DAVDQEEFLLC 251
F C + C+R P C + + +++E +C
Sbjct: 275 FNCTDVNECLRRPEMCNKNAECINREGSFIC 305
>U58764-4|AAB00726.2| 216|Caenorhabditis elegans Hypothetical
protein M03E7.5 protein.
Length = 216
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = -2
Query: 402 FHEDLHASXKTQYKMKCGFFLNVVV*QGASVFQLLASKDETLLIRRNSFFVLDLRLHILN 223
F E+L+ + K +Y ++ ++ QGASVF+ L + LL R F L L I +
Sbjct: 122 FDEELNLNDKLKYSDN---MIDQMLAQGASVFEDLQKQKYNLLSIRKRFHFLTKSLGISD 178
Query: 222 CVRRL 208
RL
Sbjct: 179 TTIRL 183
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -1
Query: 343 FECCSLTRCVRLPAACQQR*DAVDQEEFLLC 251
F C + C+R P C + + +++E +C
Sbjct: 275 FNCTDVNECLRRPEMCNKNAECINREGSFIC 305
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -1
Query: 343 FECCSLTRCVRLPAACQQR*DAVDQEEFLLC 251
F C + C+R P C + + +++E +C
Sbjct: 275 FNCTDVNECLRRPEMCNKNAECINREGSFIC 305
>Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical protein
C16C10.3 protein.
Length = 1032
Score = 27.1 bits (57), Expect = 8.9
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 160 QIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
++F ++G T + PS T +ENV E I Q LI + + ++D
Sbjct: 873 RVFPSCISGNRATDQNIPSGTCVENVLTSYGYDEFILSSQTPLIGTVRPCKYTILVNDAK 932
Query: 337 IQKESTLHLVLRLRGGMQIFVKPP 408
K +HL G Q+ +PP
Sbjct: 933 WSKNELMHLTYFRAFGHQVSYQPP 956
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 236 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHFIL 364
R++ + K E+L ++ S +L + W+ AP + T + H ++
Sbjct: 582 RKKIRAKHEYL-VDIYSRILMAKWRKQAPTRRTRLRLRRHRLI 623
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 187 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 285
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,026,351
Number of Sequences: 27780
Number of extensions: 245328
Number of successful extensions: 725
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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