Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2066
(550 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 187 5e-48
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 187 5e-48
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 187 5e-48
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 187 5e-48
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 187 5e-48
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 187 5e-48
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 187 5e-48
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 187 5e-48
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 187 5e-48
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 187 5e-48
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 187 5e-48
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 187 5e-48
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 187 5e-48
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 186 1e-47
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 182 1e-46
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 166 7e-42
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 166 7e-42
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 161 2e-40
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 152 2e-37
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 152 2e-37
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 151 2e-37
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 151 2e-37
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 151 2e-37
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 117 6e-27
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 4e-20
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 79 1e-15
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 8e-12
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 63 1e-10
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 56 1e-08
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 54 5e-08
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 54 5e-08
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 54 6e-08
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 52 3e-07
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 6e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 6e-07
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 50 8e-07
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 50 8e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 50 1e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 49 2e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 49 2e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 49 2e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 49 2e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 49 2e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 49 2e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 49 2e-06
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 49 2e-06
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 48 4e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 47 7e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 46 1e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 45 4e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 5e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 43 1e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 42 3e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 42 3e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 0.001
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 0.001
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 40 0.001
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.003
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.010
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.010
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 36 0.013
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 35 0.041
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 34 0.054
At1g11970.1 68414.m01383 hypothetical protein 34 0.054
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.13
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 32 0.22
At4g03430.1 68417.m00470 pre-mRNA splicing factor-related simila... 31 0.38
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 0.89
At1g47680.1 68414.m05297 hypothetical protein 29 2.7
At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical... 29 2.7
At3g50950.2 68416.m05579 disease resistance protein (CC-NBS-LRR ... 27 6.2
At3g50950.1 68416.m05578 disease resistance protein (CC-NBS-LRR ... 27 6.2
At2g15680.1 68415.m01795 calmodulin-related protein, putative si... 27 8.3
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 517 YF 522
F
Sbjct: 348 IF 349
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 169 bits (411), Expect = 1e-42
Identities = 87/111 (78%), Positives = 94/111 (84%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKE 489
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKE
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKE 262
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 236 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHFILYCVFXEACRS 394
+ + + K+ FL +SVSS L SS + D TTT +++ F CVF +S
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 307
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 517 YF 522
F
Sbjct: 348 IF 349
Score = 169 bits (411), Expect = 1e-42
Identities = 87/111 (78%), Positives = 94/111 (84%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKE 489
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKE
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 236 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHFILYCVFXEACRS 394
+ + + K+ FL +SVSS L SS + D TTT +++ F CVF +S
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 169 bits (411), Expect = 1e-42
Identities = 87/111 (78%), Positives = 94/111 (84%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKE 489
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKE
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 236 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHFILYCVFXEACRS 394
+ + + K+ FL +SVSS L SS + D TTT +++ F CVF +S
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 517 YF 522
F
Sbjct: 348 IF 349
Score = 169 bits (411), Expect = 1e-42
Identities = 87/111 (78%), Positives = 94/111 (84%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKE 489
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKE
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 236 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHFILYCVFXEACRS 394
+ + + K+ FL +SVSS L SS + D TTT +++ F CVF +S
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 169 bits (411), Expect = 1e-42
Identities = 87/111 (78%), Positives = 94/111 (84%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKE 489
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKE
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 236 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHFILYCVFXEACRS 394
+ + + K+ FL +SVSS L SS + D TTT +++ F CVF +S
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 517 YF 522
F
Sbjct: 272 IF 273
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 187 bits (455), Expect = 5e-48
Identities = 95/122 (77%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 183 bits (446), Expect = 6e-47
Identities = 94/122 (77%), Positives = 101/122 (82%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 212 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSGTIDNVKAKIQDKEGIPPDQQRL 270
Query: 517 YF 522
F
Sbjct: 271 IF 272
Score = 176 bits (429), Expect = 7e-45
Identities = 93/122 (76%), Positives = 100/122 (81%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKE PPDQQR
Sbjct: 136 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEWIPPDQQRL 194
Query: 517 YF 522
F
Sbjct: 195 IF 196
Score = 101 bits (241), Expect = 4e-22
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 315
MQIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 186 bits (452), Expect = 1e-47
Identities = 93/122 (76%), Positives = 102/122 (83%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFV+ RK +L + + N + IQDKEG PPDQQR
Sbjct: 139 IQKESTLHLVLRLRGGMQIFVRTLTRKTIAL-EVESSDTTDNVKAKIQDKEGIPPDQQRL 197
Query: 517 YF 522
F
Sbjct: 198 IF 199
Score = 167 bits (405), Expect = 6e-42
Identities = 87/122 (71%), Positives = 95/122 (77%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRL GGMQIFV K +L + + + N + IQDKE PDQQR
Sbjct: 215 IQKESTLHLVLRLCGGMQIFVNTLTGKTITL-EVESSDTIDNVKAKIQDKERIQPDQQRL 273
Query: 517 YF 522
F
Sbjct: 274 IF 275
Score = 154 bits (373), Expect = 4e-38
Identities = 80/122 (65%), Positives = 92/122 (75%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQI KTLT KTIT++V SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQK+S LHL LRLRGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 63 IQKDSILHLALRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGVPPDQQRL 121
Query: 517 YF 522
F
Sbjct: 122 IF 123
Score = 134 bits (324), Expect = 4e-32
Identities = 68/77 (88%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDY 333
MQIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 334 NIQKESTLHLVLRLRGG 384
NIQKESTLHLVLRLRGG
Sbjct: 291 NIQKESTLHLVLRLRGG 307
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 182 bits (444), Expect = 1e-46
Identities = 93/122 (76%), Positives = 101/122 (82%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFVK K +L + + + N + IQDKEG PDQQR
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGISPDQQRL 195
Query: 517 YF 522
F
Sbjct: 196 IF 197
Score = 169 bits (412), Expect = 8e-43
Identities = 85/122 (69%), Positives = 97/122 (79%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
+Q++STLHL+LR RGGMQIFVK K +L + + + N + IQDKEG PPDQQR
Sbjct: 61 VQEDSTLHLLLRFRGGMQIFVKTLTGKTITL-EVESSDTIDNLKAKIQDKEGIPPDQQRL 119
Query: 517 YF 522
F
Sbjct: 120 IF 121
Score = 145 bits (352), Expect = 1e-35
Identities = 71/76 (93%), Positives = 73/76 (96%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 166 bits (404), Expect = 7e-42
Identities = 85/122 (69%), Positives = 95/122 (77%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGG I VK K + + + + +++KEG PP QQR
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEI-DIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 517 YF 522
+
Sbjct: 120 IY 121
Score = 102 bits (244), Expect = 2e-22
Identities = 46/75 (61%), Positives = 60/75 (80%)
Frame = +1
Query: 163 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 342
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 343 KESTLHLVLRLRGGM 387
S LHLVL LRGG+
Sbjct: 139 GGSVLHLVLALRGGL 153
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 166 bits (404), Expect = 7e-42
Identities = 85/122 (69%), Positives = 95/122 (77%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGG I VK K + + + + +++KEG PP QQR
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEI-DIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 517 YF 522
+
Sbjct: 120 IY 121
Score = 104 bits (250), Expect = 3e-23
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +1
Query: 163 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 342
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 343 KESTLHLVLRLRGG 384
S LHLVL LRGG
Sbjct: 139 GGSVLHLVLALRGG 152
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 161 bits (392), Expect = 2e-40
Identities = 86/126 (68%), Positives = 96/126 (76%), Gaps = 4/126 (3%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQ----LXNXRXXIQDKEGXPPD 504
IQKESTLHLVLRL GGMQIFV K + L+ + + N + IQD+EG PD
Sbjct: 139 IQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPD 198
Query: 505 QQRXYF 522
QR F
Sbjct: 199 HQRLIF 204
Score = 159 bits (387), Expect = 9e-40
Identities = 84/122 (68%), Positives = 95/122 (77%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRX 516
IQKESTLHLVLRLRGGMQIFV+ K +L + K + N + IQDKEG P QQR
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVQTLTGKTITL-EVKSSDTIDNVKAKIQDKEGILPRQQRL 121
Query: 517 YF 522
F
Sbjct: 122 IF 123
Score = 127 bits (307), Expect = 4e-30
Identities = 78/161 (48%), Positives = 96/161 (59%), Gaps = 7/161 (4%)
Frame = +1
Query: 61 KLIIFARSNSVLCS*LFDIQLTKRNYCIF*IIMQIFVKTLTGKTITLEVEPSDTIENVKA 240
+LI + C+ L D + K + + MQIFVK GK ITLEV SDTI++VKA
Sbjct: 362 RLIFLGKELKDGCT-LADYSIQKESTLHLVLGMQIFVKLFGGKIITLEVLSSDTIKSVKA 420
Query: 241 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK------ 402
KIQDK G PPDQQ L+F G QL+DGRTL DYNI+ ESTLHL +R GMQIFVK
Sbjct: 421 KIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSG 480
Query: 403 -PPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRXYF 522
P K +L + + + N + IQ K G P D+QR F
Sbjct: 481 ETPTCKTITL-EVESSDTIDNVKVKIQHKVGIPLDRQRLIF 520
Score = 127 bits (306), Expect = 6e-30
Identities = 76/130 (58%), Positives = 86/130 (66%), Gaps = 7/130 (5%)
Frame = +1
Query: 157 MQIFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 321
M IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 322 LSDYNIQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEG--X 495
L+ YNIQK STL+LV R R GMQIFVK RKR +L T + N + +QDKEG
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDT-IENVKAMVQDKEGIQP 356
Query: 496 PPDQQRXYFL 525
P+ QR FL
Sbjct: 357 QPNLQRLIFL 366
Score = 126 bits (304), Expect = 1e-29
Identities = 76/124 (61%), Positives = 85/124 (68%), Gaps = 2/124 (1%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ--QRLIFAGKQLEDGRTLSD 330
MQIFVKTLT K I LEVE DTIENVKA +QDKEGI P QRLIF GK+L+DG TL+D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 331 YNIQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQ 510
Y+IQKESTLHLVL GMQIFVK K +L T + + + IQDK G PPDQQ
Sbjct: 379 YSIQKESTLHLVL----GMQIFVKLFGGKIITLEVLSSDT-IKSVKAKIQDKVGSPPDQQ 433
Query: 511 RXYF 522
F
Sbjct: 434 ILLF 437
Score = 120 bits (288), Expect = 8e-28
Identities = 71/129 (55%), Positives = 81/129 (62%), Gaps = 7/129 (5%)
Frame = +1
Query: 157 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 315
MQIFVKT T KTITLEVE SDTI+NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 316 RTLSDYNIQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGX 495
RTL DYNIQK ST+H + RGGMQIF+K K L + + + N + IQ KEG
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGKTIIL-EVESSDTIANVKEKIQVKEGI 587
Query: 496 PPDQQRXYF 522
PDQQ F
Sbjct: 588 KPDQQMLIF 596
Score = 116 bits (278), Expect = 1e-26
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 337 IQKESTLHLVLRLR 378
I K+STL+LVLRLR
Sbjct: 612 IHKKSTLYLVLRLR 625
Score = 114 bits (275), Expect = 3e-26
Identities = 69/133 (51%), Positives = 86/133 (64%), Gaps = 11/133 (8%)
Frame = +1
Query: 157 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 315
MQIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ PD QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 316 RTLSDYNIQKESTLHLVLRLRGGMQIFVK--PPDRKRPSLWKXKLRTQ--LXNXRXXIQD 483
RTL+DY I+ STL L LRLRG M IFVK P + + ++ + + N + +QD
Sbjct: 215 RTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQD 274
Query: 484 KEGXPPDQQRXYF 522
KE P D R F
Sbjct: 275 KERIPMDLHRLIF 287
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 152 bits (368), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGM 387
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 385 MQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRXYF 522
MQIFVK K +L + + + N + IQDKEG PPDQQR F
Sbjct: 1 MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 152 bits (368), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGGM 387
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 385 MQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRXYF 522
MQIFVK K +L + + + N + IQDKEG PPDQQR F
Sbjct: 1 MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 385 MQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRXYF 522
MQIFVK K +L + + + N + IQDKEG PPDQQR F
Sbjct: 1 MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 385 MQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRXYF 522
MQIFVK K +L + + + N + IQDKEG PPDQQR F
Sbjct: 1 MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 337 IQKESTLHLVLRLRGG 384
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 385 MQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKEGXPPDQQRXYF 522
MQIFVK K +L + + + N + IQDKEG PPDQQR F
Sbjct: 1 MQIFVKTLTGKTITL-EVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 117 bits (281), Expect = 6e-27
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = +1
Query: 154 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 333
+M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DY
Sbjct: 85 VMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADY 144
Query: 334 NIQKESTLHLVLRL 375
NIQ +S LHL+ RL
Sbjct: 145 NIQNDSILHLIKRL 158
Score = 35.5 bits (78), Expect = 0.024
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 16/131 (12%)
Frame = +1
Query: 178 LTGKT-ITLEVEPSDTIE-NVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYNIQK 345
+ GKT I LEV+ S T+ + + IPPD +++ D T+ + +
Sbjct: 1 MDGKTRINLEVDSSKTVNLKIDEDPTISQNIPPDILHGKVMHLSINTVDKNTMINLEVDS 60
Query: 346 ESTLHLVL--RLRGG----------MQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKE 489
T+ L + GG M IF+K +R L T + N + IQDK+
Sbjct: 61 SKTIDLNIGENPTGGYNGPDFRHEVMFIFIKTLTGRRIVLEVENCDT-IENIKAKIQDKQ 119
Query: 490 GXPPDQQRXYF 522
G P DQQR F
Sbjct: 120 GIPVDQQRLIF 130
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 94.7 bits (225), Expect = 4e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 337 IQKESTLHLVLRLRGG 384
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 79.4 bits (187), Expect = 1e-15
Identities = 54/134 (40%), Positives = 73/134 (54%), Gaps = 15/134 (11%)
Frame = +1
Query: 154 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK----------- 300
IM IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 49 IMMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSI 108
Query: 301 --QLEDGRTLSDYNIQKESTLHLVLRLRGG--MQIFVKPPDRKRPSLWKXKLRTQLXNXR 468
++ D D I E T LVLRL M+IFV +++ + + K + +
Sbjct: 109 NLEVADSSDTIDLKINGEPTRQLVLRLGPAVLMRIFVS-TIKEKTFILEVKGSDTIKKLK 167
Query: 469 XXIQDKEGXPPDQQ 510
I D+ G P DQQ
Sbjct: 168 SMIHDQGGPPVDQQ 181
Score = 67.7 bits (158), Expect = 5e-12
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +1
Query: 151 IIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 330
++M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SD
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198
Query: 331 YNIQKESTL 357
YNI+ ++ L
Sbjct: 199 YNIKPDANL 207
Score = 29.5 bits (63), Expect = 1.5
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +1
Query: 301 QLEDGRTLSDYNIQKESTLHLVLRLR-----GG-MQIFVKPPDRKRPSLWKXKLRTQLXN 462
++ED D I E T LV+ L G M IF+K R + ++ K +
Sbjct: 16 EVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTLTG-RTNTYEVKGSDTIRE 74
Query: 463 XRXXIQDKEGXPPDQQRXYFLLXSSWKT 546
+ ++KEG P +QQR F S KT
Sbjct: 75 LKAKHEEKEGIPVEQQRLIFQGRISIKT 102
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVK 237
M I +KTL GK I LEVE S ++K
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 66.9 bits (156), Expect = 8e-12
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 337 IQKESTLHLVLR 372
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/75 (40%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +1
Query: 157 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 333
+QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y
Sbjct: 95 LQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYY 154
Query: 334 NIQKESTLHLVLRLR 378
+I+++++L LV R++
Sbjct: 155 SIEQDASLQLVARMQ 169
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 330
M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 331 YNIQKESTLHLVL 369
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 175 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 351
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 352 TLHLVLRL 375
LHLVL+L
Sbjct: 100 ILHLVLKL 107
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 169 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQ 342
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 343 KESTLHLVLRLRGGMQIFVKPPDR 414
+S LHL+ +R ++ VKP ++
Sbjct: 175 DDSVLHLL--VRRSAKVRVKPVEK 196
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 175 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 351
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 352 TLHLVLRL 375
LHLVL+L
Sbjct: 100 ILHLVLKL 107
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 169 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQ 342
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 343 KESTLHLVLRLRGGMQIFVKPPDR 414
+S LHL+ +R ++ VKP ++
Sbjct: 175 DDSVLHLL--VRRSAKVRVKPVEK 196
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 54.0 bits (124), Expect = 6e-08
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 333
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 334 NIQKESTLHLVLRLRGG 384
Q ++T++LVL LRGG
Sbjct: 67 --QPDATVNLVLSLRGG 81
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +1
Query: 169 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 348
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 349 STLHLVLRLRGGMQIFVKPP 408
T+H+V RG PP
Sbjct: 82 HTIHMV---RGSAPSSAPPP 98
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 6e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 327
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 328 DYNIQKESTLHLVLRLRGG 384
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.8 bits (116), Expect = 6e-07
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +1
Query: 151 IIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 330
+ + + V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL
Sbjct: 16 VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75
Query: 331 YNIQKESTLHLV 366
Y +Q + T+H+V
Sbjct: 76 YGLQADHTVHMV 87
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 50.4 bits (115), Expect = 8e-07
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 327
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 328 DYNIQKESTLHLVL 369
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 50.4 bits (115), Expect = 8e-07
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 327
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 328 DYNIQKESTLHLVL 369
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 337 IQKESTLHL 363
I ES L L
Sbjct: 61 ILFESRLLL 69
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 333
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 334 NIQKESTLHLVLRLRGG 384
Q ++T++LVL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 327
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 328 DYNIQKESTLHLVL 369
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 327
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 328 DYNIQKESTLHLVL 369
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 327
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 328 DYNIQKESTLHLVL 369
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 327
M++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 328 DYNIQKESTLHLVL 369
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +1
Query: 154 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 330
+++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSD
Sbjct: 10 LIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSD 69
Query: 331 YNIQKESTLHLV 366
Y++++ TL+LV
Sbjct: 70 YHVEEGHTLYLV 81
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/71 (30%), Positives = 44/71 (61%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 337 IQKESTLHLVL 369
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 175 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 351
+++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S
Sbjct: 40 SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGS 99
Query: 352 TLHLVLRL 375
LHLVL+L
Sbjct: 100 VLHLVLKL 107
Score = 34.7 bits (76), Expect = 0.041
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 163 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYN 336
+ V T GK V+ + +K +I ++ +G P D Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 337 IQKESTLHLVLR 372
S +HL+++
Sbjct: 173 KDGNSVIHLLVK 184
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 48.0 bits (109), Expect = 4e-06
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Frame = +1
Query: 175 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 351
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 352 TLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDKE---GXPPDQQ 510
LHLV+RL I V+ D K L + R + + I KE G P D +
Sbjct: 98 LLHLVIRLSDLQAISVRTVDGKEFELVVERSR-NVGYVKQQIASKEKELGIPRDHE 152
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +1
Query: 154 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTL 324
+ I V+T+ GK L VE S + VK +I KE GIP D + L G++L+D R +
Sbjct: 108 LQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLI 166
Query: 325 SDYNIQKESTLHLVL 369
+D ++ +HL++
Sbjct: 167 TDLCQNGDNVIHLLI 181
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 47.2 bits (107), Expect = 7e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 337 IQKESTL 357
I ES L
Sbjct: 61 ILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 337 IQKESTLHL 363
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 333
M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 661 MKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQ 720
Query: 334 NIQKESTLHLV 366
N+Q S +HL+
Sbjct: 721 NVQPNSLVHLI 731
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 337 IQKESTLHLVL----RLRGGMQIF 396
I S + L + + R +Q+F
Sbjct: 61 ILNHSRIQLSISSPDQSRNNIQVF 84
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 333
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 334 NIQKESTLHLV 366
N+Q S +HL+
Sbjct: 560 NVQPNSLVHLL 570
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 327
M+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 328 DYNIQKESTLHLVL 369
+ +S + +++
Sbjct: 61 ANKVFDKSVIAIII 74
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +1
Query: 184 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 363
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 364 V 366
+
Sbjct: 604 M 604
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +1
Query: 154 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 333
++++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 1 MIKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGC 60
Query: 334 NIQKESTLHL 363
I+ S + L
Sbjct: 61 QIRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +1
Query: 154 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 333
++ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 35 MISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGC 94
Query: 334 NIQKESTLHL 363
I+ S + L
Sbjct: 95 QIRHNSRILL 104
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 154 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 270
+M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 48 MMSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVK 237
M+I +KT GKTI LE+E S ++K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/90 (31%), Positives = 43/90 (47%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 336
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D +
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQDHLDIKQCV 60
Query: 337 IQKESTLHLVLRLRGGMQIFVKPPDRKRPS 426
I S H+ QIFV+P P+
Sbjct: 61 ILNHS--HI--------QIFVEPNPNPNPN 80
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 297
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 157 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 297
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 36.3 bits (80), Expect = 0.013
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 214 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 384
S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L L LR RGG
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 34.7 bits (76), Expect = 0.041
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 160 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 321
++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.3 bits (75), Expect = 0.054
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 199 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 312
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 34.3 bits (75), Expect = 0.054
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 178 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 273
L+ K I +E++P D IE +K I+++ GIP D
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIPSD 81
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +1
Query: 154 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 312
++ + V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 78 LISLRVSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +1
Query: 199 LEVEPSD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 357
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At4g03430.1 68417.m00470 pre-mRNA splicing factor-related similar
to pre-mRNA splicing factor pre-mRNA splicing factor
prp1 (SP:Q12381) [Fission yeast]
Length = 1029
Score = 31.5 bits (68), Expect = 0.38
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Frame = +1
Query: 163 IFVKTLTGKTITLEVEP-SDTIENVKAKIQDKEGIPPDQQRL---------IFAGKQLED 312
+F+ GKT++++V P S TI + + +P R +F + D
Sbjct: 2 VFLSIPNGKTLSIDVNPNSTTISAFEQLAHQRSDVPQSFLRYSLRMRNPSRVFVDSKDSD 61
Query: 313 GRTLSDYNIQKESTLHLVLRLRGGMQ 390
LSD + + ST+ + + L GGMQ
Sbjct: 62 SILLSDLGVSRFSTVIIHVLLLGGMQ 87
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 0.89
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +1
Query: 214 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 354
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 355 LHLVLRL 375
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 208 EPSDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 363
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical to
G-box binding factor 4 (GBF4) SP:P42777 from
[Arabidopsis thaliana]
Length = 270
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 187 KTITL-EVEPSD--TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 357
KTI + E EP D T+E+ AK + EG + I + DG D+ +Q+ S+
Sbjct: 100 KTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEIDVKIPTERLNNDGSYTFDFPMQRHSSF 159
Query: 358 HLVLRLRGG 384
+V GG
Sbjct: 160 QMVEGSMGG 168
>At3g50950.2 68416.m05579 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 852
Score = 27.5 bits (58), Expect = 6.2
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +1
Query: 307 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDK 486
E GRT+SDY Q E L L+ MQ F+K +R++ + LRT + + R + +
Sbjct: 19 EKGRTVSDYRKQLED-LQSELKY---MQSFLKDAERQKRT--NETLRTLVADLRELVYEA 72
Query: 487 EGXPPDQQ 510
E D Q
Sbjct: 73 EDILVDCQ 80
>At3g50950.1 68416.m05578 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 852
Score = 27.5 bits (58), Expect = 6.2
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +1
Query: 307 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKPPDRKRPSLWKXKLRTQLXNXRXXIQDK 486
E GRT+SDY Q E L L+ MQ F+K +R++ + LRT + + R + +
Sbjct: 19 EKGRTVSDYRKQLED-LQSELKY---MQSFLKDAERQKRT--NETLRTLVADLRELVYEA 72
Query: 487 EGXPPDQQ 510
E D Q
Sbjct: 73 EDILVDCQ 80
>At2g15680.1 68415.m01795 calmodulin-related protein, putative
similar to calmodulin-related protein 2, touch-induced
SP:P25070 from [Arabidopsis thaliana]
Length = 187
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 373 DAVQDEVWILFECCSLTRCVRLPAACQQR*DA-VDQEEFLLCLGSS 239
+ V +W L E CSL C R+ A D V+ EEF+ + S+
Sbjct: 140 EEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKMMSSN 185
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,178,371
Number of Sequences: 28952
Number of extensions: 222990
Number of successful extensions: 829
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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