Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2054
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000051A5AA Cluster: PREDICTED: similar to CG9919-PA;...    38   0.16 
UniRef50_Q23M84 Cluster: Putative uncharacterized protein; n=1; ...    35   1.9  
UniRef50_Q7Q4G3 Cluster: ENSANGP00000019624; n=2; Culicidae|Rep:...    34   2.6  
UniRef50_A0NQB9 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_UPI000051A5AA Cluster: PREDICTED: similar to CG9919-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG9919-PA
           - Apis mellifera
          Length = 314

 Score = 38.3 bits (85), Expect = 0.16
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +2

Query: 230 GVEYHELPRHEPASGDDTWFLVLITXCIAVLGIAAFTGTL 349
           GV+Y E+P+      DDTW LVLI+ CI V+ I     TL
Sbjct: 70  GVQYIEMPQQGTVF-DDTWLLVLISSCIGVIFIGIVLATL 108


>UniRef50_Q23M84 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1739

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 183  PNVLHNRTTRTTPCFQELSTMNCPDMNPPAXTT 281
            P V H +T    PCFQ    + C   NP A T+
Sbjct: 1096 PTVAHQQTATCQPCFQHQECLQCQSQNPAACTS 1128


>UniRef50_Q7Q4G3 Cluster: ENSANGP00000019624; n=2; Culicidae|Rep:
           ENSANGP00000019624 - Anopheles gambiae str. PEST
          Length = 269

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +2

Query: 188 CXPQSNNEDHSMFPGVEYHELPRHEPASGDDTWFLVLITXCIAVLGIAA 334
           C P     + S   G+E+ ELP +     DDTW LVLI+ C+ V+ + A
Sbjct: 61  CEPSLKANEQS---GMEFVELPGN---GMDDTWMLVLISSCVGVILLGA 103


>UniRef50_A0NQB9 Cluster: Putative uncharacterized protein; n=1;
           Stappia aggregata IAM 12614|Rep: Putative
           uncharacterized protein - Stappia aggregata IAM 12614
          Length = 493

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -3

Query: 303 VIKTRNHVSSPLAGSCLGSSW-YSTPGNMEWSSLFDCGXHLDAXHGGVRLAALAKNA 136
           VI  R  V +P  G   G +W Y+TPG+  WS+LF  G       GG   AA AK A
Sbjct: 124 VISVRADVGAPGKGD--GQTWSYNTPGSPAWSALFSDG-------GGPLSAAEAKEA 171


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,376,219
Number of Sequences: 1657284
Number of extensions: 10235063
Number of successful extensions: 21855
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21834
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)