Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2054
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.     30   8.2  
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr...    30   8.2  
AB067494-1|BAB67800.1| 1737|Homo sapiens KIAA1907 protein protein.     30   8.2  

>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
          Length = 3690

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 21/64 (32%), Positives = 24/64 (37%)
 Frame = -3

Query: 354 AGRVPVKAAMPSTAMQXVIKTRNHVSSPLAGSCLGSSWYSTPGNMEWSSLFDCGXHLDAX 175
           AG  PV  A+P    Q     R HV  P    C    W  +P N E  +   C   L   
Sbjct: 728 AGLAPVDPALPEA--QVPCMCRAHVEGPSCDRCKPGFWGLSPSNPEGCT--RCSCDLRGT 783

Query: 174 HGGV 163
            GGV
Sbjct: 784 LGGV 787


>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
           precursor protein.
          Length = 3695

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 21/64 (32%), Positives = 24/64 (37%)
 Frame = -3

Query: 354 AGRVPVKAAMPSTAMQXVIKTRNHVSSPLAGSCLGSSWYSTPGNMEWSSLFDCGXHLDAX 175
           AG  PV  A+P    Q     R HV  P    C    W  +P N E  +   C   L   
Sbjct: 728 AGLAPVDPALPEA--QVPCMCRAHVEGPSCDRCKPGFWGLSPSNPEGCT--RCSCDLRGT 783

Query: 174 HGGV 163
            GGV
Sbjct: 784 LGGV 787


>AB067494-1|BAB67800.1| 1737|Homo sapiens KIAA1907 protein protein.
          Length = 1737

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 21/64 (32%), Positives = 24/64 (37%)
 Frame = -3

Query: 354 AGRVPVKAAMPSTAMQXVIKTRNHVSSPLAGSCLGSSWYSTPGNMEWSSLFDCGXHLDAX 175
           AG  PV  A+P    Q     R HV  P    C    W  +P N E  +   C   L   
Sbjct: 531 AGLAPVDPALPEA--QVPCMCRAHVEGPSCDRCKPGFWGLSPSNPEGCT--RCSCDLRGT 586

Query: 174 HGGV 163
            GGV
Sbjct: 587 LGGV 590


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,878,103
Number of Sequences: 237096
Number of extensions: 1774150
Number of successful extensions: 6840
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6839
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)