Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2031
         (550 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014643-1|AAT27267.1|  268|Drosophila melanogaster RE55992p pro...    48   6e-06
AF181658-1|AAD55443.1|  244|Drosophila melanogaster GM04779p pro...    48   6e-06
AE014296-1506|AAF50377.2|  244|Drosophila melanogaster CG33162-P...    48   6e-06
AY084181-1|AAL89919.1|  308|Drosophila melanogaster RE54230p pro...    28   9.6  
AE013599-900|AAM71078.1|  308|Drosophila melanogaster CG30339-PA...    28   9.6  

>BT014643-1|AAT27267.1|  268|Drosophila melanogaster RE55992p
           protein.
          Length = 268

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 22/45 (48%), Positives = 30/45 (66%)
 Frame = +1

Query: 7   LGKEGKDFEFSHIRNKVEFAECSANTNDDENPTDIKPLQDWISKL 141
           LGK G+DFEFSHI   ++FAE SA        T++ PL DW+++L
Sbjct: 229 LGKPGRDFEFSHIAQNIQFAEASA------KDTELDPLTDWLARL 267


>AF181658-1|AAD55443.1|  244|Drosophila melanogaster GM04779p
           protein.
          Length = 244

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 22/45 (48%), Positives = 30/45 (66%)
 Frame = +1

Query: 7   LGKEGKDFEFSHIRNKVEFAECSANTNDDENPTDIKPLQDWISKL 141
           LGK G+DFEFSHI   ++FAE SA        T++ PL DW+++L
Sbjct: 205 LGKPGRDFEFSHIAQNIQFAEASA------KDTELDPLTDWLARL 243


>AE014296-1506|AAF50377.2|  244|Drosophila melanogaster CG33162-PA
           protein.
          Length = 244

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 22/45 (48%), Positives = 30/45 (66%)
 Frame = +1

Query: 7   LGKEGKDFEFSHIRNKVEFAECSANTNDDENPTDIKPLQDWISKL 141
           LGK G+DFEFSHI   ++FAE SA        T++ PL DW+++L
Sbjct: 205 LGKPGRDFEFSHIAQNIQFAEASA------KDTELDPLTDWLARL 243


>AY084181-1|AAL89919.1|  308|Drosophila melanogaster RE54230p
           protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 64  AECSANTNDDENPTDIKPLQDWISK 138
           AE   N  ++  P D+K L+DW++K
Sbjct: 15  AETELNEVEERVPADLKALRDWLAK 39


>AE013599-900|AAM71078.1|  308|Drosophila melanogaster CG30339-PA
           protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 64  AECSANTNDDENPTDIKPLQDWISK 138
           AE   N  ++  P D+K L+DW++K
Sbjct: 15  AETELNEVEERVPADLKALRDWLAK 39


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,221,479
Number of Sequences: 53049
Number of extensions: 397653
Number of successful extensions: 660
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)