Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2029
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084185-1|AAL89923.1|  224|Drosophila melanogaster RE67583p pro...    34   0.19 
AF276505-1|AAF85707.1|  224|Drosophila melanogaster neural Lazar...    34   0.19 
AE014134-249|AAF51378.2|  224|Drosophila melanogaster CG33126-PA...    34   0.19 

>AY084185-1|AAL89923.1|  224|Drosophila melanogaster RE67583p
           protein.
          Length = 224

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 104 PSLKPVNNFQL*QLYQGIWYEISKFPNESEKNGKCSSAEYKL 229
           P +K ++ F   + Y G+WYE + +P   E   KC  A Y L
Sbjct: 34  PDVKLLDTFDA-EAYMGVWYEYAAYPFAFEIGKKCIYANYSL 74


>AF276505-1|AAF85707.1|  224|Drosophila melanogaster neural
           Lazarillo protein.
          Length = 224

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 104 PSLKPVNNFQL*QLYQGIWYEISKFPNESEKNGKCSSAEYKL 229
           P +K ++ F   + Y G+WYE + +P   E   KC  A Y L
Sbjct: 34  PDVKLLDTFDA-EAYMGVWYEYAAYPFAFEIGKKCIYANYSL 74


>AE014134-249|AAF51378.2|  224|Drosophila melanogaster CG33126-PA
           protein.
          Length = 224

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 104 PSLKPVNNFQL*QLYQGIWYEISKFPNESEKNGKCSSAEYKL 229
           P +K ++ F   + Y G+WYE + +P   E   KC  A Y L
Sbjct: 34  PDVKLLDTFDA-EAYMGVWYEYAAYPFAFEIGKKCIYANYSL 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,502,302
Number of Sequences: 53049
Number of extensions: 399985
Number of successful extensions: 708
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)