Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2026
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    45   6e-07
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.0  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   5.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.8  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 44.8 bits (101), Expect = 6e-07
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
 Frame = +3

Query: 405 LPEIXTLDLSTNGIQNLN-KFLHNAKKLVHLNLANNRIKELAMSHLPAXGS--SLDLINN 575
           +P +  LDLS N +  L+     N KKL  L+ ++NRI E+        G+   +D  +N
Sbjct: 271 MPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHN 330

Query: 576 LLRDVPSDLGHLTSLEHLELEGNPL 650
            LR +P +L   T LE L++  N L
Sbjct: 331 RLRSLPDNLFRETGLERLDVSHNLL 355



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +3

Query: 483 LVHLNLANNRIKELAMSHLPAXGSSLDLIN---NLLRDVPSDLGHLTSLEHLELEGNPL 650
           L+ L+LA N +  +A+  +    SSL  +N   N L  VP     LT L HL LEGNP+
Sbjct: 468 LLSLSLAFNSLPTVALE-VAGNISSLRYLNLDYNDLSAVPIVTHSLTELRHLSLEGNPI 525



 Score = 28.3 bits (60), Expect = 0.058
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +3

Query: 558 LDLINNLLRDVPSDLGH-LTSLEHLELEGNPL 650
           LDL NN LR+VP +  H L SL+ + L+ N +
Sbjct: 47  LDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTI 78



 Score = 28.3 bits (60), Expect = 0.058
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
 Frame = +3

Query: 405 LPEIXTLDLSTNGIQNLN----KFLHNAKKLVHLNLANNRIKELAMSHLPAXGSSLDLIN 572
           +P + +L+L  N    L      F      L+HLNL N  + ++     P    SL L  
Sbjct: 417 IPRLASLNLGHNSQLTLEINGLSFQGLEYTLLHLNLDNVSLSQVPALSTPNL-LSLSLAF 475

Query: 573 NLLRDVPSDL-GHLTSLEHLELEGNPL 650
           N L  V  ++ G+++SL +L L+ N L
Sbjct: 476 NSLPTVALEVAGNISSLRYLNLDYNDL 502



 Score = 26.6 bits (56), Expect = 0.18
 Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +3

Query: 405 LPEIXTLDLSTNGIQNLNKFLHN---AKKLVHLNLANNRIKELAMS 533
           LPE+  LDL+ N I +L+  + +   +  + H+N+++N++  L ++
Sbjct: 163 LPELEDLDLAYNSISSLDFNIFDQVGSLGMFHVNMSHNKLINLVVA 208



 Score = 24.6 bits (51), Expect = 0.71
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +3

Query: 405 LPEIXTLDLSTNGIQNLNK-FLHNAKKLVHLNLANNRIKELA---MSHLPAXGSSLDLIN 572
           L ++  + L  N I++L +    N K L  LNL  N+I  +A     +LP     LDL  
Sbjct: 115 LIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPEL-EDLDLAY 173

Query: 573 N 575
           N
Sbjct: 174 N 174



 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 341 NIXILDLSHHNITKL 385
           NI +LDLS +NIT +
Sbjct: 224 NIKVLDLSFNNITSV 238



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +2

Query: 341 NIXILDLSHHNITKLDHE 394
           ++ +LDLSH+++ +LD +
Sbjct: 273 HLQVLDLSHNSLYELDFD 290


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 231 LXSWEPLVVTPPGNTRKQESTSSCQHLEDVISCIESFP 118
           L  W  L+  P   T+K  +   C   E +I C++S P
Sbjct: 226 LVPWA-LMEQPLAQTKKLATIVGCGTDETMIKCLKSRP 262


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 231 LXSWEPLVVTPPGNTRKQESTSSCQHLEDVISCIESFP 118
           L  W  L+  P   T+K  +   C   E +I C++S P
Sbjct: 226 LVPWA-LMEQPLAQTKKLATIVGCGTDETMIKCLKSRP 262


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 231 LXSWEPLVVTPPGNTRKQESTSSCQHLEDVISCIESFP 118
           L  W  L+  P   T+K  +   C   E +I C++S P
Sbjct: 226 LVPWA-LMEQPLAQTKKLATIVGCGTDETMIRCLKSRP 262


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 180 QESTSSCQHLEDVISCIESFPLAHRM 103
           +ES S  +H E V+   +S  L HR+
Sbjct: 197 EESISKYKHAELVMPLCKSCDLHHRL 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,003
Number of Sequences: 336
Number of extensions: 2980
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)