Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2026
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 48 9e-06
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 44 1e-04
SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17) 41 0.001
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 40 0.001
SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12) 37 0.012
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 36 0.022
SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08) 36 0.038
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12) 35 0.066
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09) 34 0.12
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 33 0.15
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 33 0.15
SB_13886| Best HMM Match : 7tm_1 (HMM E-Value=1e-08) 33 0.15
SB_27801| Best HMM Match : LRR_1 (HMM E-Value=2.8e-15) 33 0.27
SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10) 33 0.27
SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36) 32 0.35
SB_33107| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13) 32 0.35
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 31 1.1
SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32) 31 1.1
SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31) 31 1.1
SB_6475| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 30 1.9
SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 29 2.5
SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08) 29 2.5
SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 29 3.3
SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15) 29 4.3
SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13) 29 4.3
SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27) 29 4.3
SB_18269| Best HMM Match : CUB (HMM E-Value=7.4e-37) 28 5.7
SB_5195| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10) 28 5.7
SB_19790| Best HMM Match : LRR_1 (HMM E-Value=0.00028) 28 5.7
SB_29271| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 7.6
SB_45899| Best HMM Match : Exo_endo_phos (HMM E-Value=0.011) 28 7.6
>SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15)
Length = 1466
Score = 47.6 bits (108), Expect = 9e-06
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQ----NLNKFLHNAKKLVHLNLANNRIKELAMSHLPAXGSSLDLIN 572
L E+ LDLS N ++ NLN L N +KL NLANN++ + LDL +
Sbjct: 991 LSELEVLDLSHNKLRAIPTNLNAKLGNIRKL---NLANNQLSCVDGLEKLYSLVELDLRS 1047
Query: 573 NLLRDVPSD--LGHLTSLEHLELEGNPL 650
NLL +V S +G L LE+L LEGNPL
Sbjct: 1048 NLLTEVSSVVLIGDLPCLENLHLEGNPL 1075
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 393 SWIXLPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPAXG-SSLDLI 569
S+ L ++ L LS N + L + N LV L L +N++ L S +LDL
Sbjct: 375 SFCNLSKLWFLQLSKNHLTELPENFGNLTSLVELRLDSNQLSSLPASFANLTNVKTLDLY 434
Query: 570 NNLLRDVPSDLGHLTSLEHLELEGNPL 650
N L ++P L L +L L+L+GN L
Sbjct: 435 RNKLSEIPRVLLKLENLMRLDLDGNKL 461
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 414 IXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELA--MSHLPAXGSSLDLINNLLRD 587
+ + D++ N I+NL + +A L HL NN I L LP +L L +N L D
Sbjct: 204 LKSFDITGNHIENLPERFESACFLEHLYADNNNITWLPDWFGDLPNI-INLCLSDNELSD 262
Query: 588 --VPSDLGHLT--SLEHLELEGN 644
+P G ++ +L L+L GN
Sbjct: 263 SALPDHFGSISGKTLSSLDLSGN 285
>SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17)
Length = 267
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Frame = +3
Query: 399 IXLPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELA-----MSHLPAXG---- 551
I L ++ LDL+ N I L + N L L L N ++EL ++ + G
Sbjct: 147 IILRDLERLDLTNNDISGLPYKIGNMSNLKSLVLNGNPLRELRRDIVMIAVIDVDGLLRM 206
Query: 552 ---SSLDLINNLLRDVPSDLGHLTSLEHLELEGNP 647
+LDL NN + VP +LG++ L+ L+L GNP
Sbjct: 207 SVLETLDLQNNNISQVPPELGNVRGLKALQLGGNP 241
Score = 33.5 bits (73), Expect = 0.15
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = +3
Query: 405 LPEIXTLD---LSTNGIQNLN-KFLHNAKKLVHLNLANNRIKELAMSHLPAXG-SSLDLI 569
LP + LD L+ N I L+ K L L+L +N + + + LDL
Sbjct: 99 LPALVLLDELYLAYNKIAELDSKVFAGYSGLTVLDLHDNLLTSIPEDIIILRDLERLDLT 158
Query: 570 NNLLRDVPSDLGHLTSLEHLELEGNPL 650
NN + +P +G++++L+ L L GNPL
Sbjct: 159 NNDISGLPYKIGNMSNLKSLVLNGNPL 185
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Frame = +3
Query: 381 NWIM-SWIXLPEIXTLDLSTNGIQ-----NLNKFLHNAKKLVHLNLANNRIKELA 527
+WI +W LP + + + N I NL F N +LVHLNL+NN I+ +A
Sbjct: 123 DWIPDNWFDLPNLEYMSVDNNQIDRISYPNLEPFFQNRSQLVHLNLSNNAIESIA 177
>SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +3
Query: 414 IXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELA--MSHLPAXGSSLDLINNLLRD 587
+ L L+ N + + + L HL++++N+++ L M L L L NN LR
Sbjct: 53 LTALFLNDNNLTRIPPDISRLCNLRHLDVSSNKLRSLPAEMGDLVTLRELL-LSNNGLRV 111
Query: 588 VPSDLGHLTSLEHLELEGNPL 650
+P++LG L L+ L L GNPL
Sbjct: 112 LPNELGKLFQLQTLGLSGNPL 132
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 399 IXLPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKEL-AMSHLPAXGSSLDLINN 575
+ L ++ L+LS N I N + L L L N+ ++ L A LDL NN
Sbjct: 72 LELTQLQVLNLSGNHITNFPYRFFMLRFLTELYLRNDFLEFLPAQVCTLVQLEVLDLANN 131
Query: 576 LLRDVPSDLGHLTSLEHLELEGNPL 650
+R +P GHLT L L L+ N +
Sbjct: 132 FIRTLPYSSGHLTRLRWLNLQNNQI 156
Score = 34.3 bits (75), Expect = 0.087
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPAXG-SSLDLINNLL 581
L ++ LDL+ N I+ L + +L LNL NN+I L S G L+L N L
Sbjct: 120 LVQLEVLDLANNFIRTLPYSSGHLTRLRWLNLQNNQITNLPSSLADMNGLCYLNLEANEL 179
Query: 582 RDVPSDLGHLTSLEHLELEGNPL 650
+ VP + L L+ L L N +
Sbjct: 180 KIVPEVVTKLEKLQVLILSDNEI 202
>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
Length = 1328
Score = 37.1 bits (82), Expect = 0.012
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNA-KKLVHLNLANNRIKELAMSHLPAXG-SSLDLINNL 578
L + LDLS N +Q+ LH A KL H+NL++N + + SLDL N
Sbjct: 972 LRNVERLDLSGNFLQDFPPLLHEAMPKLEHMNLSHNEFETFPYCLVKCKRLKSLDLSYNK 1031
Query: 579 LRDVPSDLGHLTS--LEHLELEGNPL 650
L + P L S LE L L N L
Sbjct: 1032 LTNSPPPLSISASILLEDLSLAHNVL 1057
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 36.3 bits (80), Expect = 0.022
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = +3
Query: 375 LPNWIMSWIXLPEIXTLDLSTNGIQNL-NKFLHNAKKLVHLNLANNRIKELAMSHLPAXG 551
L N+ + L ++ L L + I L +F LV L+L +N+++ L S + G
Sbjct: 93 LSNFPTGLLELTQLEYLYLKGSQISALPEEFFRKLINLVWLDLRDNQLENLPNS-IGEHG 151
Query: 552 --SSLDLINNLLRDVPSDLGHLTSLEHLELEGNPL 650
+L L N L+ +P +LG L SL + L GNP+
Sbjct: 152 RLKTLLLQGNKLKILPLELGLLNSLSAISLSGNPI 186
>SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 423 LDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELA--MSHLPAXGSSLDLINNLLRDVPS 596
LD+S N +++L + + N + + + ANN I+ L + L LDL N L +P
Sbjct: 137 LDISHNRLESLPEGIFNLELIAEIYAANNLIQALGNEVGCLHVL-KVLDLSENKLEAIPC 195
Query: 597 DLGHLTSLEHLELEGNPL 650
+L L+ L L+ NP+
Sbjct: 196 ELADCLKLKDLNLKENPI 213
Score = 35.1 bits (77), Expect = 0.050
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKEL--AMSHLPAXGSSLDLINNL 578
+ + TL+L+ N + + L NAK L L++++NR++ L + +L + + NNL
Sbjct: 109 MEHLQTLNLNCNALTTVPP-LRNAKNLARLDISHNRLESLPEGIFNLELI-AEIYAANNL 166
Query: 579 LRDVPSDLGHLTSLEHLELEGNPL 650
++ + +++G L L+ L+L N L
Sbjct: 167 IQALGNEVGCLHVLKVLDLSENKL 190
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 555 SLDLINNLLRDVPSDLGHLTSLEHLELEGNPL 650
+LD+ N ++ +PS +G L ++ ++ GN L
Sbjct: 68 TLDMHRNAIKSIPSTIGKLKDVKAIDFSGNSL 99
>SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08)
Length = 219
Score = 35.5 bits (78), Expect = 0.038
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKEL-AMSHLPAXGS--SLDLIN 572
LP + L+LS N I + + L + KL HL+L+ N+IK+L + L + SLDL N
Sbjct: 59 LPNLRKLELSDNRISSGLQNLTGSPKLTHLSLSGNKIKDLETLEPLEKLSNLKSLDLFN 117
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 35.5 bits (78), Expect = 0.038
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 408 PEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPAXG-SSLDLI-NNLL 581
P + TL LS N ++ L + +AK LV+L LA NR+ E+ LDL NN L
Sbjct: 439 PVLKTLYLSGNLLETLPDSMASAK-LVNLYLARNRLYEVPACVCELLTLEILDLSDNNRL 497
Query: 582 RDVPSDLGHLTSLEHLELE 638
+P +G LT + L L+
Sbjct: 498 TRLPEKMGKLTKISTLRLD 516
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 558 LDLINNLLRDVPSDLGHLTSLEHLELEGNPL 650
LDL N LR +PS L +T L++L+L N L
Sbjct: 399 LDLQKNKLRKIPSGLLKMTCLKYLDLSDNEL 429
>SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 34.7 bits (76), Expect = 0.066
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 375 LPNWIMSWIXLPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELA--MSHLPAX 548
+P I L + +L+LS NG L L L L L +N I+ L + +L
Sbjct: 35 IPQCITQKPLLYTLQSLELSYNGFIELPPALGELVNLQELYLQHNSIELLPDELGNLVNL 94
Query: 549 GSSLDLINNLLRDVPSDLGHLTSLEHLELEGNPL 650
L L +N L DVP G LE L + GN +
Sbjct: 95 -KRLGLAHNKLNDVPLYFGKFRQLEWLNISGNAI 127
>SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12)
Length = 139
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 558 LDLINNLLRDVPSDLGHLTSLEHLELEGNPL 650
LDL NN +R +P GHLT L L L+ N +
Sbjct: 25 LDLANNFIRTLPYSSGHLTRLRWLNLQNNQI 55
Score = 34.3 bits (75), Expect = 0.087
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPAXG-SSLDLINNLL 581
L ++ LDL+ N I+ L + +L LNL NN+I L S G L+L N L
Sbjct: 19 LVQLEVLDLANNFIRTLPYSSGHLTRLRWLNLQNNQITNLPSSLADMNGLCYLNLEANEL 78
Query: 582 RDVPSDLGHLTSLEHLELEGNPL 650
+ VP + L L+ L L N +
Sbjct: 79 KIVPEVVTKLEKLQVLILSDNEI 101
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 34.7 bits (76), Expect = 0.066
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNR---IKELAMSHLPAXGSSLDLINN 575
L + L LS N I + KL LNL NR I++ HL A L+L NN
Sbjct: 108 LSSLEVLKLSKNRISTIRGAFWGQNKLQQLNLERNRLSHIQDTTFKHLLAL-KVLNLANN 166
Query: 576 LLRDV-PSDLGHLTSLEHLELEGNPL 650
+ + L SLE L+L N +
Sbjct: 167 RIYHISQGSFSDLRSLEGLDLSNNDI 192
>SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09)
Length = 224
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 558 LDLINNLLRDVPSDLGHLTSLEHLELEGNPL 650
LDL N L +P+D+G L +L L LEGN L
Sbjct: 57 LDLSYNRLSFIPADIGKLRALRELNLEGNQL 87
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 33.5 bits (73), Expect = 0.15
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 420 TLDLSTNGIQNLNKFLHNAKKLVHLNLANN---RIKELAMSHLPAXGSSLDLINNLLRDV 590
TLDL+ + + + + + L L L N + E LP LDL NN + +V
Sbjct: 21 TLDLNRKNLIEIPPKVLDLQHLEFLYLEGNYLTTLPETLFERLPNL-KWLDLRNNHINEV 79
Query: 591 PSDLGHLTSLEHLELEGN 644
P +LG L++L LEGN
Sbjct: 80 PENLGAHRCLKNLLLEGN 97
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 483 LVHLNLANNRIKELAMSHLPAXGSSLDLINNL------LRDVPSDLGHLTSLEHLELEGN 644
LVHL+ + +L+++ LP L + L L+ +PSD+GHL +LE L+L N
Sbjct: 74 LVHLSDIDLSSNDLSLNGLPNEFFQLPKLKQLYLNDCQLKTLPSDIGHLRTLEGLQLNDN 133
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 33.5 bits (73), Expect = 0.15
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSH-LPAXGSSLDLINNLL 581
LP + LDLS N I L L L + NN+++EL + A LDL +N L
Sbjct: 83 LPHLVHLDLSYNRIGFLPDSFGYLFHLETLFINNNKLRELPDTFCYLARLQKLDLSHNQL 142
Query: 582 RDVPSDLGHLTSLEHLELEGNPL 650
+P ++G + SL + + N L
Sbjct: 143 LHLPENIGLMESLLSINVSYNEL 165
>SB_13886| Best HMM Match : 7tm_1 (HMM E-Value=1e-08)
Length = 536
Score = 33.5 bits (73), Expect = 0.15
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +3
Query: 426 DLSTNGIQNLNK-FLHNAKKLVHLNLANNRIKELAMSHLPAXGSSLDLI----NNLLRDV 590
DLS GI + N LV LNL+ NRIK +S++ SL ++ NN L +
Sbjct: 45 DLSDGGIDYIEPGTFRNYSNLVSLNLSMNRIKSFEVSNISTDLPSLAILDMTGNNWL--L 102
Query: 591 PSDLGHLTSLEHLELEGNPL 650
+D+ LTSL LE+ G L
Sbjct: 103 SNDILLLTSL--LEIRGTKL 120
>SB_27801| Best HMM Match : LRR_1 (HMM E-Value=2.8e-15)
Length = 318
Score = 32.7 bits (71), Expect = 0.27
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKE----LAMSHLPAXGSSLDLIN 572
L E+ L L N I+ L + + K L L+L NN + E L + L LDL
Sbjct: 160 LKELTYLSLHGNIIKELPLGIASMK-LSELHLVNNGLTEFHWGLCCNMLSLSLKVLDLRE 218
Query: 573 NLLRDVPSDLGHLTSLEHLELEGNPL 650
N ++ +PS + +L HL+L+ N L
Sbjct: 219 NSIKSLPSVFCNFKNLVHLKLDDNGL 244
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 414 IXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPAXGS--SLDLINNLLRD 587
+ LDL N I++L N K LVHL L +N + L + H+ S N LR
Sbjct: 211 LKVLDLRENSIKSLPSVFCNFKNLVHLKLDDNGLHLLPI-HMGRMTSLRFFSASGNNLRV 269
Query: 588 VPSDLGHLTSLEHLELEGN 644
+P L L L+ +++ N
Sbjct: 270 LPLSLSKL-RLDSVDVSNN 287
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 423 LDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPAXGSSLDLINNLLRD 587
L ++ ++ +++ + K+L +L+L N IKEL + S L L+NN L +
Sbjct: 143 LSVTNCSMKCVDRRITKLKELTYLSLHGNIIKELPLGIASMKLSELHLVNNGLTE 197
>SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10)
Length = 691
Score = 32.7 bits (71), Expect = 0.27
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Frame = +3
Query: 408 PEIXTLDLSTN-----GIQNLNKFLHNAKKLVHLNLANNRIKE---LAMSHLPAXGSSLD 563
P + TLDLS N G + + K L+ KL LNL +N+I+ A+ H + L
Sbjct: 279 PSLITLDLSHNKIGDSGARAIGKLLNGRCKLTILNLCDNKIRSNGAAAIGHALGKNTILK 338
Query: 564 LINNLLRDVPSDLGHL--------TSLEHLELEGNPL 650
IN L + D G +L H+ L GN L
Sbjct: 339 NINIRLNRLGDDGGQAICRALLKNETLTHVHLGGNDL 375
>SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36)
Length = 852
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 423 LDLSTNGIQNLNKFLHN-AKKLVHLNLANNRIKEL-AMSHLPAXGSSLDLINNLLRD 587
LDLS N I ++ + A L LNL+ N I E+ ++ P+ SSLDL NN L +
Sbjct: 626 LDLSNNRITSVPVGMPCLATSLQTLNLSGNNISEVKTLAQFPSSLSSLDLSNNRLSE 682
>SB_33107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1079
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 483 LVHLNLANNRIKELAMSHLPAXGSSLDLINNLLRDVPSDLGHLTSLEHLE 632
L L L NNRI +A + L +++L NNLL +VPS + H +L +L+
Sbjct: 118 LTFLMLQNNRIPYIAPNVLSWRILTVELTNNLLTEVPSGM-HPVNLHNLK 166
>SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13)
Length = 188
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 429 LSTNGIQNLNKFLHNAKKLVHLNLANNRIKEL--AMSHLPAXGSSLDLINNLLRDVPSDL 602
L N +++L + L N + L L L++N + L +S+L LD N + D+P +
Sbjct: 88 LDANQLRDLPRGLFNLQNLQVLGLSDNELTILPSVLSNLVNL-RILDFSKNGIIDIPETI 146
Query: 603 GHLTSLEHLELEGNPL 650
H +L+ ++ NP+
Sbjct: 147 KHCKNLQEIDASVNPI 162
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 31.9 bits (69), Expect = 0.47
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 480 KLVHLNLANNRIKELAMSHLPAXGSS-LDLINNLLRDVPSDLGHLTSLEHLELEGNPL 650
KL LN+ NR++ L + S L L +NLL+ +P+++G+ +L L++ GN L
Sbjct: 6 KLSLLNVDRNRLEVLPVELGSCTKLSVLSLRDNLLQRLPTEIGNCRNLHVLDVSGNRL 63
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 396 WIXLPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAM 530
W+ + L ++ N +++L + +A LV L L+NN++KE M
Sbjct: 440 WMRCTSLKVLKVTHNLLESLPFGIQSASSLVKLFLSNNKLKEFPM 484
>SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32)
Length = 1206
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 625 CSKLVKCPRSEGTSLKRLLIKSNELPLAGKCDMASSFILLFAKFKCTN 482
C C + G+ +R+L+K EL K +F L+F+ + TN
Sbjct: 960 CPSSCSCVYTSGSGPRRILVKGQELTAIPKTMPLDTFALMFSSNRITN 1007
>SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31)
Length = 870
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +3
Query: 423 LDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPAXGSSLDL-IN-NLLRDVPS 596
++L N I+ L + H + L L+NN IKEL M+ + + ++L IN N L+ +P
Sbjct: 522 VNLRGNAIREL-PWRHYLGNITVLELSNNEIKELNMTFVDSLARVVNLAINDNKLKYLPR 580
Query: 597 DLGHLTSLE 623
+ +LT+ E
Sbjct: 581 GVTNLTARE 589
>SB_6475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 85
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKEL 524
L I +LDLS GIQ+L+ + L++LNL++N I L
Sbjct: 11 LGSIHSLDLSNMGIQDLS-IVGQCTGLLYLNLSSNNITSL 49
>SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 423 LDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSH-LPAXGSSLDLINNLLRDVPSD 599
LD+S+NG+ ++ + KL+ NN + EL A L+L N L
Sbjct: 67 LDVSSNGLAYISARISELDKLLTFIGRNNNLDELPKEFGSLAKLEKLNLSGNRLESFGPS 126
Query: 600 LGHLTSLEHLELEGNPL 650
+ LT L+ L L GN +
Sbjct: 127 IFRLTQLKVLLLGGNKI 143
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPAXGS-----SLDLI 569
L + TL S N ++ + + + L L+L+ N+I L + G LD+
Sbjct: 287 LKNLKTLFFSANNLEIVPESICKLP-LRELDLSINKISSLPDFVRASIGDMSTLVELDIS 345
Query: 570 NNLLRDVPSDLGHLTSLEHLELEGNPL 650
+N + +P +G + LE L E NPL
Sbjct: 346 SNKITALPKSIGKMERLEILRAESNPL 372
>SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 375 LPNWIMSWIXLPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPAXGS 554
LP SWI L E L+++TN I L + + L L L+NN +K+L + A
Sbjct: 292 LPLDFGSWISLVE---LNVATNQISKLPEDIQWLVNLEVLILSNNLLKKLPRG-IGALRK 347
Query: 555 --SLDLINNLLRDVPSDLG 605
LD+ N L +P+++G
Sbjct: 348 LRVLDIEENKLESIPTEIG 366
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRI 515
L + LDL+ N + ++ + N KL +LNL NN I
Sbjct: 544 LESLEKLDLNNNKLTSIPAGITNLTKLTNLNLENNNI 580
>SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08)
Length = 535
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 414 IXTLDLSTNGIQNL-NKFLHNAKKLVHLNLANNRIKE 521
+ L L+ N ++ + N L K L++LNLANN++++
Sbjct: 52 VKNLTLADNDLEEIGNASLSGLKSLLYLNLANNKLRK 88
>SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06)
Length = 575
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 483 LVHLNLANNRIKELAMSHLPAXGS--SLDLINNLLRDVPSDLGH-LTSLEHLELEGNPL 650
L++L L NN I +A + SL+L +N + ++ L SLE LEL+GNP+
Sbjct: 130 LINLTLENNSISAIAPHAFKGLDNLQSLNLRHNNISLWEGNISRDLPSLEILELDGNPV 188
>SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15)
Length = 272
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 405 LPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANN 509
L + TLD+ N +Q+L + N K L LN++NN
Sbjct: 109 LSSLQTLDVQGNNLQSLPLEIGNLKLLRSLNVSNN 143
>SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13)
Length = 489
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 426 DLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMS 533
DLS G + K L + K L L+LANN I++ +S
Sbjct: 146 DLSAKGSVYMGKVLVSNKSLKELDLANNNIRKEGVS 181
>SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27)
Length = 309
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 423 LDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSH--LPAXGSSLDLINNLLRDVPS 596
L N I +L + L L+L N + L LP + LDL N + P
Sbjct: 165 LSAGKNMITSLPDKISGLVSLQWLSLRENHLSSLPSEFFKLPKL-AHLDLNMNKFEEFPE 223
Query: 597 DLGHLTSLEHLELEGN 644
+L L SLE L L GN
Sbjct: 224 NLIGLVSLECLSLRGN 239
>SB_18269| Best HMM Match : CUB (HMM E-Value=7.4e-37)
Length = 1655
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 468 HNAKKLVHLNLANNRIKELAMSHLPAXGSSLDLINNLLRDVPSD-LGHLTSLEHLE 632
H +K LV L +++ S LP + +DL NLL+ +P D LT L LE
Sbjct: 804 HGSKSLV-LTASHHHTITTFPSSLPQTSTIIDLSENLLKVLPPDQFSALTDLTTLE 858
>SB_5195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -2
Query: 613 VKCPRSEGTSLKRLLIKSNELPLAGKCDMASSFILLFAKFKCTNFFALC 467
V CP +EG S +KS L GK D + F+L + F LC
Sbjct: 290 VLCPYTEGFSTMPETLKSLFSILLGKLDYNNDFVLTSDFQRLVQLFLLC 338
>SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10)
Length = 1029
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 381 NWIMSWIXLPEIXTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPAXGSSL 560
N+ ++ LP I + + N N N K+ + + + R KEL + LP GS
Sbjct: 326 NYPCQFVGLPSIPE-NSTKNTTSNNNNNEEKPVKIEDMRVVDMR-KELKLRGLPVSGSKT 383
Query: 561 DLINNL 578
DLI L
Sbjct: 384 DLIERL 389
>SB_19790| Best HMM Match : LRR_1 (HMM E-Value=0.00028)
Length = 74
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 558 LDLINNLLRDVPSDLGHLTSLEHLELEGNPL 650
LD+ +N + +P +G + LE L E NPL
Sbjct: 7 LDISSNKITALPKSIGKMERLEILRAESNPL 37
>SB_29271| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 796
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 383 IW*YCGGKDLKYXCYGALAKGELIKFGEVTAR 288
+W Y GG+D+ + L+ G+L K GEV +R
Sbjct: 159 VWKYAGGRDVTH-----LSSGQLYKAGEVISR 185
>SB_45899| Best HMM Match : Exo_endo_phos (HMM E-Value=0.011)
Length = 707
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 214 WLPAXQPSVPKAAFAVLLAMAYIVPRAVTSPNFISSPFAKAP*HXYFRSFP 366
WL +P++ +L+ + Y P AVT N I + + RS P
Sbjct: 190 WLHVKPYRLPRSVSTILIGVIYHPPHAVTEDNSILYSHVQETVDCFLRSHP 240
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,137,484
Number of Sequences: 59808
Number of extensions: 369457
Number of successful extensions: 853
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -