Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2021
         (600 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1D2K2 Cluster: Putative uncharacterized protein; n=2; ...    36   0.73 
UniRef50_UPI0000DA19D4 Cluster: PREDICTED: hypothetical protein;...    34   2.9  
UniRef50_A4A0V9 Cluster: Putative uncharacterized protein; n=1; ...    33   6.8  
UniRef50_Q3JVP4 Cluster: Pyruvate oxidase; n=17; Bacteria|Rep: P...    32   9.0  
UniRef50_Q848C9 Cluster: Putative yme-like protein; n=1; Strepto...    32   9.0  

>UniRef50_Q1D2K2 Cluster: Putative uncharacterized protein; n=2;
           Cystobacterineae|Rep: Putative uncharacterized protein -
           Myxococcus xanthus (strain DK 1622)
          Length = 411

 Score = 35.9 bits (79), Expect = 0.73
 Identities = 21/53 (39%), Positives = 26/53 (49%)
 Frame = -1

Query: 405 LGQLLASSTPLGRAFARPPVLVKLERPPGHQ*YFNHKKKTLRTVLCFAHVLGG 247
           L Q L+ S PL   F  P  +V L+ PPG   +     +TL     FAHVL G
Sbjct: 24  LAQGLSPSRPLQAWFHGPEGMVLLQEPPGFAGFLAGSLRTLSVEEVFAHVLSG 76


>UniRef50_UPI0000DA19D4 Cluster: PREDICTED: hypothetical protein;
           n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 356

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +1

Query: 310 LLVARRPFQFHQYRWASKGSAKRGGTC*QLPERLRRKPNSSRAPALRMNL 459
           +L+ RRP    + RWA +GS         LP   RR     RAPA  + L
Sbjct: 234 ILLRRRPLSLRRARWAGEGSPPHAAGA-NLPGARRRAVREPRAPAAALRL 282


>UniRef50_A4A0V9 Cluster: Putative uncharacterized protein; n=1;
           Blastopirellula marina DSM 3645|Rep: Putative
           uncharacterized protein - Blastopirellula marina DSM
           3645
          Length = 228

 Score = 32.7 bits (71), Expect = 6.8
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +1

Query: 340 HQYRWASKGSAKRGGTC*QLPERLRRKPNSSRAPALRMNLLPDRSRDPLXXSGEKLGGL 516
           H YR + KG  K GG    L   L ++  S + PA+R  LL   S   +    E+L G+
Sbjct: 87  HHYRLSEKGKRKGGGNFADLAVALWQEVRSIKDPAVRRGLLQRISERLVAQYAEELEGI 145


>UniRef50_Q3JVP4 Cluster: Pyruvate oxidase; n=17; Bacteria|Rep:
           Pyruvate oxidase - Burkholderia pseudomallei (strain
           1710b)
          Length = 744

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 19/67 (28%), Positives = 28/67 (41%)
 Frame = +1

Query: 277 SSKGFFFMIEVLLVARRPFQFHQYRWASKGSAKRGGTC*QLPERLRRKPNSSRAPALRMN 456
           S  GF  M     +ARRP  + Q R     +     +C   P R+RR+  ++ AP     
Sbjct: 4   SENGFIVMASFDSIARRPASYRQRRRHPARNPHTRRSCVDPPARIRRRTRTATAPKATPR 63

Query: 457 LLPDRSR 477
             P + R
Sbjct: 64  GSPPKRR 70


>UniRef50_Q848C9 Cluster: Putative yme-like protein; n=1;
           Streptomyces lividans|Rep: Putative yme-like protein -
           Streptomyces lividans
          Length = 757

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 418 SFGGARAAVSKFHPAWPSLCSPTCTGETGKASGPPVILQ 302
           S+ GAR   ++  P WP  CS         A GPP+ LQ
Sbjct: 65  SWSGARRLHTRCGPRWPLACSDIACYRIRPARGPPLALQ 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,718,513
Number of Sequences: 1657284
Number of extensions: 9869389
Number of successful extensions: 21080
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21077
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)