Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2019
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical pr... 204 6e-53
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 99 3e-21
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 99 3e-21
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 99 3e-21
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 99 3e-21
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 99 3e-21
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 89 3e-18
AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical... 86 2e-17
AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 86 2e-17
AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin bet... 86 2e-17
AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 86 2e-17
U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical pr... 81 9e-16
Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical pr... 57 9e-09
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 2.2
U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical pr... 29 3.8
U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical pr... 29 3.8
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 29 3.8
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.8
U58758-2|AAB93428.1| 424|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical ... 28 5.0
Z83112-4|CAN99694.1| 108|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z83112-3|CAB05540.1| 119|Caenorhabditis elegans Hypothetical pr... 28 6.6
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 28 6.6
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 28 6.6
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 28 6.6
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 6.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 6.6
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z47812-3|CAA87790.1| 158|Caenorhabditis elegans Hypothetical pr... 27 8.7
U41531-6|AAA83160.1| 144|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical
protein W09D10.1 protein.
Length = 495
Score = 204 bits (497), Expect = 6e-53
Identities = 87/146 (59%), Positives = 113/146 (77%)
Frame = +1
Query: 61 KSEKDRAKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNL 240
+ + D K+ Q+R Q L+ MLK+E+NKYC DC AK PRWA+WNLG+F+CIRCAGIHRNL
Sbjct: 3 RGKVDPKKEEQERLQGFLLDMLKEEENKYCADCQAKTPRWAAWNLGVFICIRCAGIHRNL 62
Query: 241 GVHISKVKSVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKY 420
GVHISKV+SVNLDSWTPEQV +++ MGN +AR VYE +LP FRRP ND +E FIR+KY
Sbjct: 63 GVHISKVRSVNLDSWTPEQVQTMRVMGNEKARQVYEHDLPAQFRRPTNDQQMEQFIRSKY 122
Query: 421 EQKKYIAKEWVPPQLPKVNWDKEIDE 498
EQK+YI +++V P++ K + +
Sbjct: 123 EQKRYILRDFVYPRVDASQLPKSLSQ 148
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 98.7 bits (235), Expect = 3e-21
Identities = 44/107 (41%), Positives = 64/107 (59%)
Frame = +1
Query: 139 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQVVSLQQM 318
N C DC WAS NLGI +CI C+GIHRNLG HISKV+ + LD W E + +Q +
Sbjct: 630 NGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHLAVMQAI 689
Query: 319 GNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPP 459
GN +A ++E L + R+P + S E + ++ +KY+ K ++ P
Sbjct: 690 GNDKANEMWEFGLLNGERKPTPESSREE--KERFIDRKYVQKAFLKP 734
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 98.7 bits (235), Expect = 3e-21
Identities = 44/107 (41%), Positives = 64/107 (59%)
Frame = +1
Query: 139 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQVVSLQQM 318
N C DC WAS NLGI +CI C+GIHRNLG HISKV+ + LD W E + +Q +
Sbjct: 678 NGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHLAVMQAI 737
Query: 319 GNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPP 459
GN +A ++E L + R+P + S E + ++ +KY+ K ++ P
Sbjct: 738 GNDKANEMWEFGLLNGERKPTPESSREE--KERFIDRKYVQKAFLKP 782
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 98.7 bits (235), Expect = 3e-21
Identities = 44/107 (41%), Positives = 64/107 (59%)
Frame = +1
Query: 139 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQVVSLQQM 318
N C DC WAS NLGI +CI C+GIHRNLG HISKV+ + LD W E + +Q +
Sbjct: 834 NGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHLAVMQAI 893
Query: 319 GNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPP 459
GN +A ++E L + R+P + S E + ++ +KY+ K ++ P
Sbjct: 894 GNDKANEMWEFGLLNGERKPTPESSREE--KERFIDRKYVQKAFLKP 938
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma 1B
protein.
Length = 1107
Score = 98.7 bits (235), Expect = 3e-21
Identities = 44/107 (41%), Positives = 64/107 (59%)
Frame = +1
Query: 139 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQVVSLQQM 318
N C DC WAS NLGI +CI C+GIHRNLG HISKV+ + LD W E + +Q +
Sbjct: 834 NGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHLAVMQAI 893
Query: 319 GNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPP 459
GN +A ++E L + R+P + S E + ++ +KY+ K ++ P
Sbjct: 894 GNDKANEMWEFGLLNGERKPTPESSREE--KERFIDRKYVQKAFLKP 938
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 98.7 bits (235), Expect = 3e-21
Identities = 44/107 (41%), Positives = 64/107 (59%)
Frame = +1
Query: 139 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQVVSLQQM 318
N C DC WAS NLGI +CI C+GIHRNLG HISKV+ + LD W E + +Q +
Sbjct: 679 NGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHLAVMQAI 738
Query: 319 GNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPP 459
GN +A ++E L + R+P + S E + ++ +KY+ K ++ P
Sbjct: 739 GNDKANEMWEFGLLNGERKPTPESSREE--KERFIDRKYVQKAFLKP 783
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 88.6 bits (210), Expect = 3e-18
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +1
Query: 97 RCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNL 276
R + +L ++ +DN +C +C+A P+W S + GI++C+ C+GIHR+LGVH+S V+SV +
Sbjct: 5 RTRRVLKELRPCDDNNFCFECEANNPQWVSVSYGIWICLECSGIHRSLGVHLSFVRSVTM 64
Query: 277 DSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQK---KYIAKE 447
D W ++ ++ GN R A + + PD + S A + K + +E
Sbjct: 65 DKWKDIELAKMKAGGN-RKFAEFLQSQPDYKEKWTIQEKYNSRAAALFRDKVACEAEGRE 123
Query: 448 WVPPQLPKVNWDKEIDEEMDRQKR--KKKSATSSLG 549
W P N+ M Q + K S SSLG
Sbjct: 124 WSQSTSPAANYVPPTLGGMSSQSKPTNKSSGNSSLG 159
>AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical
protein Y17G7B.15b protein.
Length = 742
Score = 86.2 bits (204), Expect = 2e-17
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Frame = +1
Query: 118 QMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQ 297
Q+ + N+ C DC + P+W S NLG+ LCI C+G HR+LGV SKV+S+ +DS E
Sbjct: 368 QVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNEL 427
Query: 298 VVSLQQMGNSRARAVYEANLP--DSFRRPQ-NDMSL----ESFIRAKYEQKKYIAKE 447
L +GN + ++ A+LP DS PQ N+ S E++I+AKY ++++ E
Sbjct: 428 RDVLLALGNRQVNEIFLAHLPPADSIVPPQINEKSARPAREAWIKAKYVERRFAVAE 484
>AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical
protein Y17G7B.15a protein.
Length = 826
Score = 86.2 bits (204), Expect = 2e-17
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Frame = +1
Query: 118 QMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQ 297
Q+ + N+ C DC + P+W S NLG+ LCI C+G HR+LGV SKV+S+ +DS E
Sbjct: 452 QVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNEL 511
Query: 298 VVSLQQMGNSRARAVYEANLP--DSFRRPQ-NDMSL----ESFIRAKYEQKKYIAKE 447
L +GN + ++ A+LP DS PQ N+ S E++I+AKY ++++ E
Sbjct: 512 RDVLLALGNRQVNEIFLAHLPPADSIVPPQINEKSARPAREAWIKAKYVERRFAVAE 568
>AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin beta
1B protein.
Length = 742
Score = 86.2 bits (204), Expect = 2e-17
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Frame = +1
Query: 118 QMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQ 297
Q+ + N+ C DC + P+W S NLG+ LCI C+G HR+LGV SKV+S+ +DS E
Sbjct: 368 QVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNEL 427
Query: 298 VVSLQQMGNSRARAVYEANLP--DSFRRPQ-NDMSL----ESFIRAKYEQKKYIAKE 447
L +GN + ++ A+LP DS PQ N+ S E++I+AKY ++++ E
Sbjct: 428 RDVLLALGNRQVNEIFLAHLPPADSIVPPQINEKSARPAREAWIKAKYVERRFAVAE 484
>AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta
1A protein.
Length = 826
Score = 86.2 bits (204), Expect = 2e-17
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Frame = +1
Query: 118 QMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQ 297
Q+ + N+ C DC + P+W S NLG+ LCI C+G HR+LGV SKV+S+ +DS E
Sbjct: 452 QVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNEL 511
Query: 298 VVSLQQMGNSRARAVYEANLP--DSFRRPQ-NDMSL----ESFIRAKYEQKKYIAKE 447
L +GN + ++ A+LP DS PQ N+ S E++I+AKY ++++ E
Sbjct: 512 RDVLLALGNRQVNEIFLAHLPPADSIVPPQINEKSARPAREAWIKAKYVERRFAVAE 568
>U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical
protein F07F6.4 protein.
Length = 529
Score = 80.6 bits (190), Expect = 9e-16
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +1
Query: 139 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLD-SWTPEQVVSLQQ 315
NK C DC A+ P W + G+FLCI C+ +HRNLGVH++ V+S NLD +WT Q+ ++Q
Sbjct: 25 NKLCFDCGARNPTWCTVTYGVFLCIDCSAVHRNLGVHLTFVRSTNLDTNWTWLQLRAMQL 84
Query: 316 MGNSRARAVYEAN 354
GN A ++A+
Sbjct: 85 GGNGNANQFFKAH 97
>Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical
protein F14F3.2 protein.
Length = 670
Score = 57.2 bits (132), Expect = 9e-09
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Frame = +1
Query: 115 VQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPE 294
+ ++ + K C DC K WAS G +C C H LG +S ++ + +W E
Sbjct: 7 LDLITSLEQKECDDCGKKEVEWASVKKGTVICSECFCFHSYLGPSVSYLRHLRKSAWDEE 66
Query: 295 QVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLE-SFIRAKYEQKKYIAKEWVPPQLPK 471
+ + + S ++E+ L + + Q M+ + S I+ ++ ++KY E + Q PK
Sbjct: 67 HIRLVHALNTSNTNMIWESALYEGSTKFQKPMAQDPSHIKEQFVKEKY---EKLTFQ-PK 122
Query: 472 VNWDKEIDEEMDRQ 513
D++++ ++RQ
Sbjct: 123 RGKDEDLENSLNRQ 136
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 289 PEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQK 429
PE +V+ +++ A AV +N F++P DMS +R +QK
Sbjct: 622 PEGIVAQKKVSREEAEAVQHSNA--LFKKPSQDMSASLTVRDMAQQK 666
>U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical
protein ZK1127.9e protein.
Length = 604
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +1
Query: 49 EMTSKSEKDRAKQIQDRCQNILVQMLKDEDNKY 147
E T +SEK + + +D +N+L+ ++K +N +
Sbjct: 480 ERTKESEKQKMGEHEDTYRNLLIDLIKSTENSW 512
>U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical
protein ZK1127.9c protein.
Length = 693
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +1
Query: 49 EMTSKSEKDRAKQIQDRCQNILVQMLKDEDNKY 147
E T +SEK + + +D +N+L+ ++K +N +
Sbjct: 480 ERTKESEKQKMGEHEDTYRNLLIDLIKSTENSW 512
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +1
Query: 49 EMTSKSEKDRAKQIQDRCQNILVQMLKDEDNKY 147
E T +SEK + + +D +N+L+ ++K +N +
Sbjct: 701 ERTKESEKQKMGEHEDTYRNLLIDLIKSTENSW 733
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +1
Query: 49 EMTSKSEKDRAKQIQDRCQNILVQMLKDEDNKY 147
E T +SEK + + +D +N+L+ ++K +N +
Sbjct: 692 ERTKESEKQKMGEHEDTYRNLLIDLIKSTENSW 724
>U58758-2|AAB93428.1| 424|Caenorhabditis elegans Hypothetical
protein ZK1127.6 protein.
Length = 424
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +1
Query: 49 EMTSKSEKDRAKQIQDRCQNILVQMLKDEDNKY 147
E T +SEK + + +D +N+L+ ++K +N +
Sbjct: 210 ERTKESEKQKMGEHEDTYRNLLIDLIKSTENSW 242
>AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical
protein C54E4.1 protein.
Length = 245
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +1
Query: 325 SRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPPQLPKVNWDKEIDEEM 504
SR + E P+S R + A K+ + PQLP+++ + +
Sbjct: 145 SRKGSTTELLTPNSARSDIYSIEFNQAAIAAARLKRLSLTPYPDPQLPRLS-PLQQQQPH 203
Query: 505 DRQKRKKKSATSSLGPLP 558
R KKS TSS+ P P
Sbjct: 204 HRSNSTKKSVTSSVSPKP 221
>Z83112-4|CAN99694.1| 108|Caenorhabditis elegans Hypothetical
protein K02B7.3b protein.
Length = 108
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +1
Query: 361 DSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPPQLPKVNWDKEIDEEMDRQKRKKK 528
+ + P+ ++ ++ KYE KE + P+L KV D + K +K+
Sbjct: 47 EKLQDPETHKNIREWVAEKYEAASEFTKEEIVPELKKVYEAATADVTTNEPKEEKE 102
>Z83112-3|CAB05540.1| 119|Caenorhabditis elegans Hypothetical
protein K02B7.3a protein.
Length = 119
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +1
Query: 361 DSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPPQLPKVNWDKEIDEEMDRQKRKKK 528
+ + P+ ++ ++ KYE KE + P+L KV D + K +K+
Sbjct: 58 EKLQDPETHKNIREWVAEKYEAASEFTKEEIVPELKKVYEAATADVTTNEPKEEKE 113
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 396 GIVHTRQIRTEEIHCEGVGAPAAAQSQLG*RNRRRDGSTEKEKEVGDVIARTPTG 560
G ++R G+GAP Q LG RN RD + + + D++ T G
Sbjct: 777 GAAFNSRVRNYREELFGMGAPTVKQGFLGVRN--RDITVRERRRYTDILRETTQG 829
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 396 GIVHTRQIRTEEIHCEGVGAPAAAQSQLG*RNRRRDGSTEKEKEVGDVIARTPTG 560
G ++R G+GAP Q LG RN RD + + + D++ T G
Sbjct: 741 GAAFNSRVRNYREELFGMGAPTVKQGFLGVRN--RDITVRERRRYTDILRETTQG 793
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 396 GIVHTRQIRTEEIHCEGVGAPAAAQSQLG*RNRRRDGSTEKEKEVGDVIARTPTG 560
G ++R G+GAP Q LG RN RD + + + D++ T G
Sbjct: 744 GAAFNSRVRNYREELFGMGAPTVKQGFLGVRN--RDITVRERRRYTDILRETTQG 796
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 396 GIVHTRQIRTEEIHCEGVGAPAAAQSQLG*RNRRRDGSTEKEKEVGDVIARTPTG 560
G ++R G+GAP Q LG RN RD + + + D++ T G
Sbjct: 6789 GAAFNSRVRNYREELFGMGAPTVKQGFLGVRN--RDITVRERRRYTDILRETTQG 6841
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 396 GIVHTRQIRTEEIHCEGVGAPAAAQSQLG*RNRRRDGSTEKEKEVGDVIARTPTG 560
G ++R G+GAP Q LG RN RD + + + D++ T G
Sbjct: 7429 GAAFNSRVRNYREELFGMGAPTVKQGFLGVRN--RDITVRERRRYTDILRETTQG 7481
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 424 QKKYIAKEWVPPQLPKVNWDKEIDEEMDRQKRK---KKSATSSLGPLPAP 564
+++YI P+L + D D + +R+ + +K TS L P P P
Sbjct: 833 KRRYITNMKTAPELGSITPDSSQDSQSEREAERFVARKPHTSQLPPPPTP 882
>Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical
protein F49A5.4 protein.
Length = 308
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1
Query: 94 DRCQNILVQMLKDE--DNKYC-VDCDAKGPRWASWNL 195
D+ L++ +KD+ +N + + CD GP W +W+L
Sbjct: 94 DQENQALMEFVKDQKVENLWAGLICDRHGPAWCTWDL 130
>Z47812-3|CAA87790.1| 158|Caenorhabditis elegans Hypothetical
protein T05H10.3 protein.
Length = 158
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -2
Query: 250 CERPDSDGSQRSGCTGICPNSMKPIVDLLHHSQRS 146
C + D DG +R C +CP S + + R+
Sbjct: 62 CWQEDHDGEEREYCDIVCPKSHTVFISYIDQGHRA 96
>U41531-6|AAA83160.1| 144|Caenorhabditis elegans Hypothetical
protein T07D1.3 protein.
Length = 144
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 314 CCSDTTCSGVHESRLTLFT 258
CC+D C+ V ++ L LFT
Sbjct: 113 CCADDMCNSVRQTSLALFT 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,879,481
Number of Sequences: 27780
Number of extensions: 334350
Number of successful extensions: 1235
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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