Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1336
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    27   0.74 
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    24   3.9  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   9.1  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 26.6 bits (56), Expect = 0.74
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 356 IYRNCLKKTRKHNNDSTKQ 412
           +Y NCLKK  +HNN    Q
Sbjct: 702 MYENCLKKFYRHNNVEVMQ 720


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = +2

Query: 80  DLPSLETHRCHSVNTVTHV---DK*IAIAWLN 166
           +LP LE   C+SV  V +V   DK + I  LN
Sbjct: 270 ELPGLEHEACNSVYAVANVTLSDKQLCIGGLN 301


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +2

Query: 53  YIASIIK-VHDLPSLETHRC 109
           Y   II+ VHDL SL TH C
Sbjct: 236 YHKQIIQYVHDLNSLVTHLC 255


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,508
Number of Sequences: 2352
Number of extensions: 12369
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)