Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1335
         (369 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like alpha-2...    66   3e-11
AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.     66   3e-11
AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy c...    30   2.0  
AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy ch...    30   2.0  

>AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like
            alpha-2-macroglobulin domain containing 8 protein.
          Length = 1885

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
 Frame = +1

Query: 70   VATDDNLQYQFF--PVSSGSVQFKVRAANDAHVALTTGPQESDPMYEVMIGGWGNAKSVI 243
            ++T +  ++Q+   P+        VRA NDA VAL++GPQ++  M E+++GG  N +S I
Sbjct: 953  ISTPNKYEFQYVQRPLRLTRFDVAVRAHNDARVALSSGPQDTAGMIEIVLGGHQNTRSWI 1012

Query: 244  RKNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAGREGE 369
              ++         +  IL+  E+R FW+ W  G+I  G   E
Sbjct: 1013 STSKMGEPVASAHTAKILSWDEFRTFWISWRGGLIQVGHGPE 1054


>AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.
          Length = 1884

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
 Frame = +1

Query: 70   VATDDNLQYQFF--PVSSGSVQFKVRAANDAHVALTTGPQESDPMYEVMIGGWGNAKSVI 243
            ++T +  ++Q+   P+        VRA NDA VAL++GPQ++  M E+++GG  N +S I
Sbjct: 952  ISTPNKYEFQYVQRPLRLTRFDVAVRAHNDARVALSSGPQDTAGMIEIVLGGHQNTRSWI 1011

Query: 244  RKNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAGREGE 369
              ++         +  IL+  E+R FW+ W  G+I  G   E
Sbjct: 1012 STSKMGEPVASAHTAKILSWDEFRTFWISWRGGLIQVGHGPE 1053


>AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy
           chain 9 protein.
          Length = 4486

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = -2

Query: 290 PGLSISTLSGLV----LFFLMTLLAFPQPPIITSYIGSDSCGPVVSATWASFAAL 138
           PGL +   SGL     LFFL T    P+PP   S+ G+  CG + +A     AAL
Sbjct: 85  PGLEVGPESGLAGAKALFFLRT---GPEPPGPDSFRGAVVCGDLPAAPLEHLAAL 136


>AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy chain
           9 protein.
          Length = 4486

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = -2

Query: 290 PGLSISTLSGLV----LFFLMTLLAFPQPPIITSYIGSDSCGPVVSATWASFAAL 138
           PGL +   SGL     LFFL T    P+PP   S+ G+  CG + +A     AAL
Sbjct: 85  PGLEVGPESGLAGAKALFFLRT---GPEPPGPDSFRGAVVCGDLPAAPLEHLAAL 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,038,466
Number of Sequences: 237096
Number of extensions: 979961
Number of successful extensions: 2385
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2385
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)