Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1333
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    24   1.4  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   4.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.7  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 51  YRCKSCAKAFNKVDQIR 1
           Y C  C KAF + D +R
Sbjct: 108 YSCDICGKAFRRQDHLR 124


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 51  YRCKSCAKAFN 19
           YRC+ C KAF+
Sbjct: 78  YRCRLCKKAFS 88


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 51  YRCKSCAKAFN 19
           YRC+ C KAF+
Sbjct: 334 YRCRLCKKAFS 344


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 330 LLCDPTVILLYRTFICFGEYIFHIYLLFCL 241
           +L    V LL+  F C+     HIY L  L
Sbjct: 7   VLTAAAVFLLFYLFYCYKTIKQHIYSLISL 36


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 330 LLCDPTVILLYRTFICFGEYIFHIYLLFCL 241
           +L    V LL+  F C+     HIY L  L
Sbjct: 7   VLTAAAVFLLFYLFYCYKTIKQHIYSLISL 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,615
Number of Sequences: 336
Number of extensions: 3224
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)