Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1333
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.1  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   9.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   9.5  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 356 DILQMNINNCCVTQ 315
           DILQ+NIN C + Q
Sbjct: 2   DILQININKCRIAQ 15


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 599 YYHMYNISR*RTLKYPIIYFWFQLDFNVG 513
           Y  +Y ++   ++  PIIY W  L F  G
Sbjct: 336 YLAIYWLAMSNSMYNPIIYCWMNLRFRRG 364


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 437 LKLANFVSKLLISPSTPKDLIIC 369
           +KL   VSK+  +P TP++ + C
Sbjct: 640 IKLGFCVSKVRAAPPTPRERVRC 662


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,334
Number of Sequences: 2352
Number of extensions: 11306
Number of successful extensions: 103
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)