Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1333
(717 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009932-1|AAH09932.1| 209|Homo sapiens glycolipid transfer pro... 58 3e-08
AY372532-1|AAR87373.1| 209|Homo sapiens glycolipid transfer pro... 58 3e-08
AY372531-1|AAR85985.1| 209|Homo sapiens glycolipid transfer pro... 58 3e-08
AY372530-1|AAR85984.1| 209|Homo sapiens glycolipid transfer pro... 58 3e-08
AF209704-1|AAF33210.1| 209|Homo sapiens glycolipid transfer pro... 58 3e-08
BC053990-1|AAH53990.1| 455|Homo sapiens PLEKHA8 protein protein. 56 1e-07
BC002838-1|AAH02838.1| 440|Homo sapiens pleckstrin homology dom... 46 1e-04
X59244-1|CAA41932.1| 803|Homo sapiens ZNF43 protein. 32 2.4
BT009756-1|AAP88758.1| 803|Homo sapiens zinc finger protein 43 ... 32 2.4
BC006528-1|AAH06528.2| 809|Homo sapiens zinc finger protein 43 ... 32 2.4
AK023180-1|BAB14449.1| 372|Homo sapiens protein ( Homo sapiens ... 31 4.1
BC063818-1|AAH63818.1| 504|Homo sapiens ZNF273 protein protein. 30 7.2
AB021644-1|BAA86990.1| 642|Homo sapiens gonadotropin inducible ... 30 7.2
>BC009932-1|AAH09932.1| 209|Homo sapiens glycolipid transfer
protein protein.
Length = 209
Score = 58.0 bits (134), Expect = 3e-08
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Frame = +1
Query: 40 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINNG-------KAPVTEGVLWLNRAL 198
F P+K D+ GNI +IK Y + + + E+ K T ++WL R L
Sbjct: 42 FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101
Query: 199 LFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQM 375
F ++ I + + + N+ V TKAYE ++KKYH W+ Q++F +P +
Sbjct: 102 RFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDF 161
Query: 376 IKS 384
+K+
Sbjct: 162 LKA 164
>AY372532-1|AAR87373.1| 209|Homo sapiens glycolipid transfer
protein protein.
Length = 209
Score = 58.0 bits (134), Expect = 3e-08
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Frame = +1
Query: 40 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINNG-------KAPVTEGVLWLNRAL 198
F P+K D+ GNI +IK Y + + + E+ K T ++WL R L
Sbjct: 42 FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101
Query: 199 LFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQM 375
F ++ I + + + N+ V TKAYE ++KKYH W+ Q++F +P +
Sbjct: 102 RFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDF 161
Query: 376 IKS 384
+K+
Sbjct: 162 LKA 164
>AY372531-1|AAR85985.1| 209|Homo sapiens glycolipid transfer
protein protein.
Length = 209
Score = 58.0 bits (134), Expect = 3e-08
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Frame = +1
Query: 40 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINNG-------KAPVTEGVLWLNRAL 198
F P+K D+ GNI +IK Y + + + E+ K T ++WL R L
Sbjct: 42 FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101
Query: 199 LFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQM 375
F ++ I + + + N+ V TKAYE ++KKYH W+ Q++F +P +
Sbjct: 102 RFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDF 161
Query: 376 IKS 384
+K+
Sbjct: 162 LKA 164
>AY372530-1|AAR85984.1| 209|Homo sapiens glycolipid transfer
protein protein.
Length = 209
Score = 58.0 bits (134), Expect = 3e-08
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Frame = +1
Query: 40 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINNG-------KAPVTEGVLWLNRAL 198
F P+K D+ GNI +IK Y + + + E+ K T ++WL R L
Sbjct: 42 FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101
Query: 199 LFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQM 375
F ++ I + + + N+ V TKAYE ++KKYH W+ Q++F +P +
Sbjct: 102 RFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDF 161
Query: 376 IKS 384
+K+
Sbjct: 162 LKA 164
>AF209704-1|AAF33210.1| 209|Homo sapiens glycolipid transfer
protein protein.
Length = 209
Score = 58.0 bits (134), Expect = 3e-08
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Frame = +1
Query: 40 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINNG-------KAPVTEGVLWLNRAL 198
F P+K D+ GNI +IK Y + + + E+ K T ++WL R L
Sbjct: 42 FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101
Query: 199 LFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQM 375
F ++ I + + + N+ V TKAYE ++KKYH W+ Q++F +P +
Sbjct: 102 RFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDF 161
Query: 376 IKS 384
+K+
Sbjct: 162 LKA 164
>BC053990-1|AAH53990.1| 455|Homo sapiens PLEKHA8 protein protein.
Length = 455
Score = 56.4 bits (130), Expect = 1e-07
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Frame = +1
Query: 7 LVYLVERLG-TAFAPVKFDMQGNIDRIKKNY--KFDENSCLLMLMLEEINNGKAPV---- 165
+V ++++LG T FAPVK D+ GNI ++ + Y +E + L ++L E+ A V
Sbjct: 342 VVPVLDKLGPTVFAPVKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSA 401
Query: 166 TEGVLWLNRALLFFELVFVDILENLQAKKEINMKYVFTKAYEGSVKKYHSWVTQQLF 336
TE +LWL R L F + ++ E +++ AY +++++H WV + +F
Sbjct: 402 TEALLWLKRGLKFLKGFLTEVKNG-----EKDIQTALNNAYGKTLRQHHGWVVRGVF 453
>BC002838-1|AAH02838.1| 440|Homo sapiens pleckstrin homology domain
containing, family A (phosphoinositide binding speci
protein.
Length = 440
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Frame = +1
Query: 7 LVYLVERLG-TAFAPVKFDMQGNIDRIKKNY--KFDENSCLLMLMLEEINNGKAPV---- 165
+V ++++LG T FAPVK D+ GNI ++ + Y +E + L ++L E+ A V
Sbjct: 342 VVPVLDKLGPTVFAPVKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSA 401
Query: 166 TEGVLWLNRALLFFE 210
TE +LWL R L F +
Sbjct: 402 TEALLWLKRGLKFLK 416
>X59244-1|CAA41932.1| 803|Homo sapiens ZNF43 protein.
Length = 803
Score = 31.9 bits (69), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 57 KFYRCKSCAKAFNK 16
KFY+CK CAKAFN+
Sbjct: 278 KFYKCKECAKAFNQ 291
>BT009756-1|AAP88758.1| 803|Homo sapiens zinc finger protein 43
(HTF6) protein.
Length = 803
Score = 31.9 bits (69), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 57 KFYRCKSCAKAFNK 16
KFY+CK CAKAFN+
Sbjct: 278 KFYKCKECAKAFNQ 291
>BC006528-1|AAH06528.2| 809|Homo sapiens zinc finger protein 43
protein.
Length = 809
Score = 31.9 bits (69), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 57 KFYRCKSCAKAFNK 16
KFY+CK CAKAFN+
Sbjct: 284 KFYKCKECAKAFNQ 297
>AK023180-1|BAB14449.1| 372|Homo sapiens protein ( Homo sapiens
cDNA FLJ13118 fis, clone NT2RP3002663, highly similar to
Homo sapiens putative glycolipid transfer protein mRNA.
).
Length = 372
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/30 (43%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +1
Query: 7 LVYLVERLG-TAFAPVKFDMQGNIDRIKKN 93
+V ++++LG T FAPVK D+ GNI ++ ++
Sbjct: 342 VVPVLDKLGPTVFAPVKMDLVGNIKKVNRS 371
>BC063818-1|AAH63818.1| 504|Homo sapiens ZNF273 protein protein.
Length = 504
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 60 IKFYRCKSCAKAFNKVDQI 4
+ FY+CK+C KAFN+ +
Sbjct: 166 VNFYKCKTCGKAFNQFSNL 184
>AB021644-1|BAA86990.1| 642|Homo sapiens gonadotropin inducible
transcription repressor-4 protein.
Length = 642
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = -1
Query: 90 FFYSINISLHI------KFYRCKSCAKAFNKVDQIR 1
FFYS + H+ + Y+CK C KAFN + R
Sbjct: 316 FFYSASFRAHVIIHTGARPYKCKECGKAFNSSNSCR 351
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,277,264
Number of Sequences: 237096
Number of extensions: 1493114
Number of successful extensions: 10095
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10090
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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