BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1333 (717 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC009932-1|AAH09932.1| 209|Homo sapiens glycolipid transfer pro... 58 3e-08 AY372532-1|AAR87373.1| 209|Homo sapiens glycolipid transfer pro... 58 3e-08 AY372531-1|AAR85985.1| 209|Homo sapiens glycolipid transfer pro... 58 3e-08 AY372530-1|AAR85984.1| 209|Homo sapiens glycolipid transfer pro... 58 3e-08 AF209704-1|AAF33210.1| 209|Homo sapiens glycolipid transfer pro... 58 3e-08 BC053990-1|AAH53990.1| 455|Homo sapiens PLEKHA8 protein protein. 56 1e-07 BC002838-1|AAH02838.1| 440|Homo sapiens pleckstrin homology dom... 46 1e-04 X59244-1|CAA41932.1| 803|Homo sapiens ZNF43 protein. 32 2.4 BT009756-1|AAP88758.1| 803|Homo sapiens zinc finger protein 43 ... 32 2.4 BC006528-1|AAH06528.2| 809|Homo sapiens zinc finger protein 43 ... 32 2.4 AK023180-1|BAB14449.1| 372|Homo sapiens protein ( Homo sapiens ... 31 4.1 BC063818-1|AAH63818.1| 504|Homo sapiens ZNF273 protein protein. 30 7.2 AB021644-1|BAA86990.1| 642|Homo sapiens gonadotropin inducible ... 30 7.2 >BC009932-1|AAH09932.1| 209|Homo sapiens glycolipid transfer protein protein. Length = 209 Score = 58.0 bits (134), Expect = 3e-08 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%) Frame = +1 Query: 40 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINNG-------KAPVTEGVLWLNRAL 198 F P+K D+ GNI +IK Y + + + E+ K T ++WL R L Sbjct: 42 FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101 Query: 199 LFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQM 375 F ++ I + + + N+ V TKAYE ++KKYH W+ Q++F +P + Sbjct: 102 RFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDF 161 Query: 376 IKS 384 +K+ Sbjct: 162 LKA 164 >AY372532-1|AAR87373.1| 209|Homo sapiens glycolipid transfer protein protein. Length = 209 Score = 58.0 bits (134), Expect = 3e-08 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%) Frame = +1 Query: 40 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINNG-------KAPVTEGVLWLNRAL 198 F P+K D+ GNI +IK Y + + + E+ K T ++WL R L Sbjct: 42 FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101 Query: 199 LFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQM 375 F ++ I + + + N+ V TKAYE ++KKYH W+ Q++F +P + Sbjct: 102 RFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDF 161 Query: 376 IKS 384 +K+ Sbjct: 162 LKA 164 >AY372531-1|AAR85985.1| 209|Homo sapiens glycolipid transfer protein protein. Length = 209 Score = 58.0 bits (134), Expect = 3e-08 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%) Frame = +1 Query: 40 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINNG-------KAPVTEGVLWLNRAL 198 F P+K D+ GNI +IK Y + + + E+ K T ++WL R L Sbjct: 42 FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101 Query: 199 LFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQM 375 F ++ I + + + N+ V TKAYE ++KKYH W+ Q++F +P + Sbjct: 102 RFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDF 161 Query: 376 IKS 384 +K+ Sbjct: 162 LKA 164 >AY372530-1|AAR85984.1| 209|Homo sapiens glycolipid transfer protein protein. Length = 209 Score = 58.0 bits (134), Expect = 3e-08 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%) Frame = +1 Query: 40 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINNG-------KAPVTEGVLWLNRAL 198 F P+K D+ GNI +IK Y + + + E+ K T ++WL R L Sbjct: 42 FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101 Query: 199 LFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQM 375 F ++ I + + + N+ V TKAYE ++KKYH W+ Q++F +P + Sbjct: 102 RFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDF 161 Query: 376 IKS 384 +K+ Sbjct: 162 LKA 164 >AF209704-1|AAF33210.1| 209|Homo sapiens glycolipid transfer protein protein. Length = 209 Score = 58.0 bits (134), Expect = 3e-08 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%) Frame = +1 Query: 40 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINNG-------KAPVTEGVLWLNRAL 198 F P+K D+ GNI +IK Y + + + E+ K T ++WL R L Sbjct: 42 FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101 Query: 199 LFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQM 375 F ++ I + + + N+ V TKAYE ++KKYH W+ Q++F +P + Sbjct: 102 RFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDF 161 Query: 376 IKS 384 +K+ Sbjct: 162 LKA 164 >BC053990-1|AAH53990.1| 455|Homo sapiens PLEKHA8 protein protein. Length = 455 Score = 56.4 bits (130), Expect = 1e-07 Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 7/117 (5%) Frame = +1 Query: 7 LVYLVERLG-TAFAPVKFDMQGNIDRIKKNY--KFDENSCLLMLMLEEINNGKAPV---- 165 +V ++++LG T FAPVK D+ GNI ++ + Y +E + L ++L E+ A V Sbjct: 342 VVPVLDKLGPTVFAPVKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSA 401 Query: 166 TEGVLWLNRALLFFELVFVDILENLQAKKEINMKYVFTKAYEGSVKKYHSWVTQQLF 336 TE +LWL R L F + ++ E +++ AY +++++H WV + +F Sbjct: 402 TEALLWLKRGLKFLKGFLTEVKNG-----EKDIQTALNNAYGKTLRQHHGWVVRGVF 453 >BC002838-1|AAH02838.1| 440|Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding speci protein. Length = 440 Score = 46.4 bits (105), Expect = 1e-04 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 7/75 (9%) Frame = +1 Query: 7 LVYLVERLG-TAFAPVKFDMQGNIDRIKKNY--KFDENSCLLMLMLEEINNGKAPV---- 165 +V ++++LG T FAPVK D+ GNI ++ + Y +E + L ++L E+ A V Sbjct: 342 VVPVLDKLGPTVFAPVKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSA 401 Query: 166 TEGVLWLNRALLFFE 210 TE +LWL R L F + Sbjct: 402 TEALLWLKRGLKFLK 416 >X59244-1|CAA41932.1| 803|Homo sapiens ZNF43 protein. Length = 803 Score = 31.9 bits (69), Expect = 2.4 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -1 Query: 57 KFYRCKSCAKAFNK 16 KFY+CK CAKAFN+ Sbjct: 278 KFYKCKECAKAFNQ 291 >BT009756-1|AAP88758.1| 803|Homo sapiens zinc finger protein 43 (HTF6) protein. Length = 803 Score = 31.9 bits (69), Expect = 2.4 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -1 Query: 57 KFYRCKSCAKAFNK 16 KFY+CK CAKAFN+ Sbjct: 278 KFYKCKECAKAFNQ 291 >BC006528-1|AAH06528.2| 809|Homo sapiens zinc finger protein 43 protein. Length = 809 Score = 31.9 bits (69), Expect = 2.4 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -1 Query: 57 KFYRCKSCAKAFNK 16 KFY+CK CAKAFN+ Sbjct: 284 KFYKCKECAKAFNQ 297 >AK023180-1|BAB14449.1| 372|Homo sapiens protein ( Homo sapiens cDNA FLJ13118 fis, clone NT2RP3002663, highly similar to Homo sapiens putative glycolipid transfer protein mRNA. ). Length = 372 Score = 31.1 bits (67), Expect = 4.1 Identities = 13/30 (43%), Positives = 23/30 (76%), Gaps = 1/30 (3%) Frame = +1 Query: 7 LVYLVERLG-TAFAPVKFDMQGNIDRIKKN 93 +V ++++LG T FAPVK D+ GNI ++ ++ Sbjct: 342 VVPVLDKLGPTVFAPVKMDLVGNIKKVNRS 371 >BC063818-1|AAH63818.1| 504|Homo sapiens ZNF273 protein protein. Length = 504 Score = 30.3 bits (65), Expect = 7.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -1 Query: 60 IKFYRCKSCAKAFNKVDQI 4 + FY+CK+C KAFN+ + Sbjct: 166 VNFYKCKTCGKAFNQFSNL 184 >AB021644-1|BAA86990.1| 642|Homo sapiens gonadotropin inducible transcription repressor-4 protein. Length = 642 Score = 30.3 bits (65), Expect = 7.2 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 6/36 (16%) Frame = -1 Query: 90 FFYSINISLHI------KFYRCKSCAKAFNKVDQIR 1 FFYS + H+ + Y+CK C KAFN + R Sbjct: 316 FFYSASFRAHVIIHTGARPYKCKECGKAFNSSNSCR 351 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 82,277,264 Number of Sequences: 237096 Number of extensions: 1493114 Number of successful extensions: 10095 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3990 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10090 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8399192100 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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