Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1333
(717 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g33470.2 68415.m04103 glycolipid transfer protein-related sim... 73 1e-13
At2g33470.1 68415.m04102 glycolipid transfer protein-related sim... 73 1e-13
At3g21260.2 68416.m02687 glycolipid transfer protein-related con... 34 0.082
At3g21260.1 68416.m02686 glycolipid transfer protein-related con... 34 0.11
At1g34440.1 68414.m04279 hypothetical protein 29 3.1
At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase fa... 29 4.1
At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase fa... 29 4.1
At4g09280.1 68417.m01536 Ulp1 protease family protein contains P... 28 5.4
At2g42330.1 68415.m05239 D111/G-patch domain-containing protein ... 28 5.4
>At2g33470.2 68415.m04103 glycolipid transfer protein-related
similar to phosphoinositol 4-phosphate adaptor protein-2
(GI:14165198) [Homo sapiens]; similar to Glycolipid
transfer protein (GLTP) (Swiss-Prot:Q9JL62) [Mus
musculus]; similar to Glycolipid transfer protein (GLTP)
(Swiss-Prot:Q9NZD2) [Homo sapiens]
Length = 202
Score = 73.3 bits (172), Expect = 1e-13
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Frame = +1
Query: 16 LVERLGTAFAPVKFDMQGNIDRIKKNY-----KFDENSCLLMLMLE-EINNGKAPVTEGV 177
++++ G A VK D+ GNI R++KNY KF + + +E +I G + T G+
Sbjct: 38 VIDKFGAAMTLVKSDIGGNITRLEKNYLSDPDKFKYLYTFVQVEIESKIAKGSSSCTNGL 97
Query: 178 LWLNRALLFFELVFVDILENLQAKKEINMKYVFTKAYEGSVKKYHSWVTQQLFIFICKMS 357
LWL RA+ F V++ NL A ++ +M +Y+ ++KK+H W+ F K++
Sbjct: 98 LWLTRAMDFL----VELFRNLVAHQDWSMPQACADSYQKTLKKWHGWLASSTFSMALKLA 153
Query: 358 PTFAQMIKSFGVDGDIKS-FETKLASFNITLHLN 456
P + + G+I++ E A F LH N
Sbjct: 154 PDRKKFMDVISGSGNIQADMERFCAEFGPFLHDN 187
>At2g33470.1 68415.m04102 glycolipid transfer protein-related
similar to phosphoinositol 4-phosphate adaptor protein-2
(GI:14165198) [Homo sapiens]; similar to Glycolipid
transfer protein (GLTP) (Swiss-Prot:Q9JL62) [Mus
musculus]; similar to Glycolipid transfer protein (GLTP)
(Swiss-Prot:Q9NZD2) [Homo sapiens]
Length = 202
Score = 73.3 bits (172), Expect = 1e-13
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Frame = +1
Query: 16 LVERLGTAFAPVKFDMQGNIDRIKKNY-----KFDENSCLLMLMLE-EINNGKAPVTEGV 177
++++ G A VK D+ GNI R++KNY KF + + +E +I G + T G+
Sbjct: 38 VIDKFGAAMTLVKSDIGGNITRLEKNYLSDPDKFKYLYTFVQVEIESKIAKGSSSCTNGL 97
Query: 178 LWLNRALLFFELVFVDILENLQAKKEINMKYVFTKAYEGSVKKYHSWVTQQLFIFICKMS 357
LWL RA+ F V++ NL A ++ +M +Y+ ++KK+H W+ F K++
Sbjct: 98 LWLTRAMDFL----VELFRNLVAHQDWSMPQACADSYQKTLKKWHGWLASSTFSMALKLA 153
Query: 358 PTFAQMIKSFGVDGDIKS-FETKLASFNITLHLN 456
P + + G+I++ E A F LH N
Sbjct: 154 PDRKKFMDVISGSGNIQADMERFCAEFGPFLHDN 187
>At3g21260.2 68416.m02687 glycolipid transfer protein-related
contains weak similarity to Glycolipid transfer protein
(GLTP) (Swiss-Prot:P17403) [Sus scrofa]
Length = 149
Score = 34.3 bits (75), Expect = 0.082
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Frame = +1
Query: 79 RIKKNYKFDE--NSCLLMLMLEEINNGKA----PVTEGVLWLNRALLFFELVFVDILENL 240
R++K ++ D S L+ ++ +E G + + LWL RA+ F + +L+ L
Sbjct: 2 RLEKMWESDPLVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFT----LALLQRL 57
Query: 241 QAKKEINMKYVFTKAYEGSVKKYHSWVTQQLFIFICKMSP 360
NM+ + Y ++K +H W++ F K+ P
Sbjct: 58 VKDMSQNMEQAIEECYNLTIKPWHGWISSAAFKVALKLVP 97
>At3g21260.1 68416.m02686 glycolipid transfer protein-related
contains weak similarity to Glycolipid transfer protein
(GLTP) (Swiss-Prot:P17403) [Sus scrofa]
Length = 144
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +1
Query: 166 TEGVLWLNRALLFFELVFVDILENLQAKKEINMKYVFTKAYEGSVKKYHSWVTQQLFIFI 345
+ LWL RA+ F + +L+ L NM+ + Y ++K +H W++ F
Sbjct: 32 SRAALWLTRAMDFT----LALLQRLVKDMSQNMEQAIEECYNLTIKPWHGWISSAAFKVA 87
Query: 346 CKMSP 360
K+ P
Sbjct: 88 LKLVP 92
>At1g34440.1 68414.m04279 hypothetical protein
Length = 157
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 534 KPKINYRIF*STLTRYIIHMIIKKVQAPVTMIQWFC 641
K K++ RI S + I + +I+ APVT++ WFC
Sbjct: 121 KDKVSSRIIYSD--QLIFYNVIEAGLAPVTIVDWFC 154
>At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase
family protein contains similarity to
phosphatidylinositol 4-kinase 230 GI:2326227 from [Homo
sapiens], from [Bos taurus] GI:2198791; contains Pfam
profiles PF00454: Phosphatidylinositol 3- and 4-kinase,
PF00613: Phosphoinositide 3-kinase family, accessory
domain
Length = 2028
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 355 SPTFAQMIKSFGVDGDIKSFETKLASFNITLH-LNRCKIDDFFKDNNLF 498
+P F Q + SF D I+S E + +F + H L++ KID +D F
Sbjct: 272 NPVFRQQVASF-EDESIESLEKQEIAFRLITHILDKVKIDSKLQDQVRF 319
>At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase
family protein contains similarity to
phosphatidylinositol 4-kinase 230 GI:2326227 from [Homo
sapiens], from [Bos taurus] GI:2198791; contains Pfam
profiles PF00454: Phosphatidylinositol 3- and 4-kinase,
PF00613: Phosphoinositide 3-kinase family, accessory
domain
Length = 2028
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 355 SPTFAQMIKSFGVDGDIKSFETKLASFNITLH-LNRCKIDDFFKDNNLF 498
+P F Q + SF D I+S E + +F + H L++ KID +D F
Sbjct: 272 NPVFRQQVASF-EDESIESLEKQEIAFRLITHILDKVKIDSKLQDQVRF 319
>At4g09280.1 68417.m01536 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 298
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 175 VLWLNRALLFFELVFVDILENLQAKKEINMKYVFTKAYE-GSVKKYHSWVTQQLFIFICK 351
V+ R + + L E L A++E + F YE S K H+W+ F
Sbjct: 2 VIMFLRQISYISLYMFPFAEPLVAERE---EESFWSVYELASGKIIHAWIHIDCFFIQLI 58
Query: 352 MSPTFAQMIKSFGVDGDIK 408
+SP Q +K + DIK
Sbjct: 59 LSPNCMQKLKDYLSSLDIK 77
>At2g42330.1 68415.m05239 D111/G-patch domain-containing protein
similar to SP|Q9ERA6 Tuftelin-interacting protein 11
{Mus musculus}; contains Pfam profile PF01585: G-patch
domain
Length = 752
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +1
Query: 46 PVKFDMQGNIDRIKK----NYKFDEN-SCLLMLMLEEINNGKAPVTE 171
PVKF GNID++ K N K DEN +L + L + KA V E
Sbjct: 45 PVKFSSAGNIDQVLKQNRGNCKIDENDDTILPIALGKKIADKAHVRE 91
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,653,275
Number of Sequences: 28952
Number of extensions: 230242
Number of successful extensions: 533
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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