Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1330
(644 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain fami... 161 5e-40
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 159 2e-39
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 159 2e-39
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 159 2e-39
AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain famil... 150 7e-37
AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain famil... 150 7e-37
AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain famil... 143 1e-34
AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical ... 120 7e-28
Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical pr... 100 2e-21
U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determinati... 100 2e-21
AF040660-1|AAC71148.1| 634|Caenorhabditis elegans Hypothetical ... 38 0.005
Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical p... 34 0.075
Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical pr... 34 0.075
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z35663-14|CAA84733.1| 805|Caenorhabditis elegans Hypothetical p... 29 3.7
U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer ... 28 6.5
U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer ... 28 6.5
AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform... 28 6.5
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 28 6.5
>AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain family
protein 7 protein.
Length = 778
Score = 161 bits (390), Expect = 5e-40
Identities = 73/109 (66%), Positives = 85/109 (77%)
Frame = +1
Query: 316 DFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRF 495
+F+ R RCL + LFEDP+FPA D SLYYK D PI W RPGEI +NPQL V SRF
Sbjct: 296 NFQQERQRCLDQRCLFEDPQFPANDSSLYYKTRPDEPIIWKRPGEIYENPQLIVGEKSRF 355
Query: 496 DVQQGELGDCWLLAAVANLTLYRKLFFQVVPDDQSFDEDYAGVFHFRFW 642
DV+QG LGDCWLLAAVANLTL +LF++VVP DQSF E+YAG+FHF+FW
Sbjct: 356 DVKQGALGDCWLLAAVANLTLRDELFYRVVPPDQSFTENYAGIFHFQFW 404
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 159 bits (385), Expect = 2e-39
Identities = 73/120 (60%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Frame = +1
Query: 286 PSSFGPATY-QDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDN 462
P S P T QDF ++R +CL RLFEDP+F A D SL++ + + + WLRPGEI+
Sbjct: 245 PISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEITRE 304
Query: 463 PQLFVEGYSRFDVQQGELGDCWLLAAVANLTLYRKLFFQVVPDDQSFDEDYAGVFHFRFW 642
PQL EG+SRFDV QGELGDCWLLAA ANLTL +LF++VVP DQSF E+YAG+FHF+FW
Sbjct: 305 PQLITEGHSRFDVIQGELGDCWLLAAAANLTLKDELFYRVVPPDQSFTENYAGIFHFQFW 364
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 159 bits (385), Expect = 2e-39
Identities = 73/120 (60%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Frame = +1
Query: 286 PSSFGPATY-QDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDN 462
P S P T QDF ++R +CL RLFEDP+F A D SL++ + + + WLRPGEI+
Sbjct: 270 PISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEITRE 329
Query: 463 PQLFVEGYSRFDVQQGELGDCWLLAAVANLTLYRKLFFQVVPDDQSFDEDYAGVFHFRFW 642
PQL EG+SRFDV QGELGDCWLLAA ANLTL +LF++VVP DQSF E+YAG+FHF+FW
Sbjct: 330 PQLITEGHSRFDVIQGELGDCWLLAAAANLTLKDELFYRVVPPDQSFTENYAGIFHFQFW 389
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 159 bits (385), Expect = 2e-39
Identities = 73/120 (60%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Frame = +1
Query: 286 PSSFGPATY-QDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDN 462
P S P T QDF ++R +CL RLFEDP+F A D SL++ + + + WLRPGEI+
Sbjct: 291 PISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEITRE 350
Query: 463 PQLFVEGYSRFDVQQGELGDCWLLAAVANLTLYRKLFFQVVPDDQSFDEDYAGVFHFRFW 642
PQL EG+SRFDV QGELGDCWLLAA ANLTL +LF++VVP DQSF E+YAG+FHF+FW
Sbjct: 351 PQLITEGHSRFDVIQGELGDCWLLAAAANLTLKDELFYRVVPPDQSFTENYAGIFHFQFW 410
>AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain family
protein 4, isoform b protein.
Length = 603
Score = 150 bits (364), Expect = 7e-37
Identities = 66/109 (60%), Positives = 80/109 (73%)
Frame = +1
Query: 316 DFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRF 495
DF+ R +CL LFEDPEFPA SLYY+ I W RPGEI NPQL +G SRF
Sbjct: 226 DFETEREKCLRNKTLFEDPEFPATAASLYYRTPPRDRIIWKRPGEIIANPQLITQGESRF 285
Query: 496 DVQQGELGDCWLLAAVANLTLYRKLFFQVVPDDQSFDEDYAGVFHFRFW 642
DV+QG LGDCW LAA+AN+TLY LF+++VP +QSF E+YAG+FHF+FW
Sbjct: 286 DVKQGALGDCWFLAALANITLYDALFYRIVPPNQSFTENYAGIFHFQFW 334
>AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain family
protein 4, isoform a protein.
Length = 716
Score = 150 bits (364), Expect = 7e-37
Identities = 66/109 (60%), Positives = 80/109 (73%)
Frame = +1
Query: 316 DFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRF 495
DF+ R +CL LFEDPEFPA SLYY+ I W RPGEI NPQL +G SRF
Sbjct: 226 DFETEREKCLRNKTLFEDPEFPATAASLYYRTPPRDRIIWKRPGEIIANPQLITQGESRF 285
Query: 496 DVQQGELGDCWLLAAVANLTLYRKLFFQVVPDDQSFDEDYAGVFHFRFW 642
DV+QG LGDCW LAA+AN+TLY LF+++VP +QSF E+YAG+FHF+FW
Sbjct: 286 DVKQGALGDCWFLAALANITLYDALFYRIVPPNQSFTENYAGIFHFQFW 334
>AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain family
protein 6 protein.
Length = 790
Score = 143 bits (346), Expect = 1e-34
Identities = 63/108 (58%), Positives = 79/108 (73%)
Frame = +1
Query: 319 FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFD 498
F + R +CL E RLFEDP+FPA + S+YYK+ I WLRP +I NP+L V G SRFD
Sbjct: 144 FYEERQKCLDENRLFEDPQFPANNSSIYYKKPPKSHIVWLRPAKIFANPRLIVNGKSRFD 203
Query: 499 VQQGELGDCWLLAAVANLTLYRKLFFQVVPDDQSFDEDYAGVFHFRFW 642
V+QG LG+CW LAA A L +LF++VVP DQSF E+YAG+FHF+FW
Sbjct: 204 VRQGSLGNCWFLAAAATLAQRDELFYRVVPPDQSFTENYAGIFHFQFW 251
>AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical
protein Y47H10A.1 protein.
Length = 702
Score = 120 bits (290), Expect = 7e-28
Identities = 55/108 (50%), Positives = 72/108 (66%)
Frame = +1
Query: 319 FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFD 498
F + R +CL E RLFEDP+FPA + S+Y K I W RPGE+ NP+L + FD
Sbjct: 202 FHEERQKCLDEKRLFEDPQFPANNSSIYVKVRPKDHIVWKRPGELFANPRLIGSDKTHFD 261
Query: 499 VQQGELGDCWLLAAVANLTLYRKLFFQVVPDDQSFDEDYAGVFHFRFW 642
V+ G L + W L+ ANL+L +LF++VVP DQSF E YAG+FHF+FW
Sbjct: 262 VKLGRLENRWFLSGAANLSLRDELFYRVVPPDQSFTEKYAGIFHFQFW 309
>Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical
protein LLC1.1 protein.
Length = 648
Score = 99.5 bits (237), Expect = 2e-21
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Frame = +1
Query: 313 QDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSR 492
Q+++ +R C+ + + F D FP ++SL+ ++ I W RPGE+ +P LFVEG S
Sbjct: 13 QNYEKLRKICIKKKQPFVDTLFPPTNQSLFLEQRQSSDIVWKRPGELHPDPHLFVEGASP 72
Query: 493 FDVQQGELGDCWLLAAVANLTLYRKLFFQVVP--DDQ--SFDEDYAGVFHFRFW 642
DV QG LG+CW ++A + LT KL QV+P DDQ S YAG+F FRFW
Sbjct: 73 NDVTQGILGNCWFVSACSALTHNFKLLAQVIPDADDQEWSTKHAYAGIFRFRFW 126
>U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determination
protein.
Length = 648
Score = 99.5 bits (237), Expect = 2e-21
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Frame = +1
Query: 313 QDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSR 492
Q+++ +R C+ + + F D FP ++SL+ ++ I W RPGE+ +P LFVEG S
Sbjct: 13 QNYEKLRKICIKKKQPFVDTLFPPTNQSLFLEQRQSSDIVWKRPGELHPDPHLFVEGASP 72
Query: 493 FDVQQGELGDCWLLAAVANLTLYRKLFFQVVP--DDQ--SFDEDYAGVFHFRFW 642
DV QG LG+CW ++A + LT KL QV+P DDQ S YAG+F FRFW
Sbjct: 73 NDVTQGILGNCWFVSACSALTHNFKLLAQVIPDADDQEWSTKHAYAGIFRFRFW 126
>AF040660-1|AAC71148.1| 634|Caenorhabditis elegans Hypothetical
protein W05G11.4 protein.
Length = 634
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +1
Query: 376 FPAVDRSLYYKESLDRPITWLRPGEI--SDNPQLFVEGYSR---FDVQQGEL-GDCWLLA 537
FP+ + S+ + WLRP +I D ++ D++QG L GDCWLL+
Sbjct: 98 FPSTTNGVQCNNSIIDSLHWLRPSQIRTKDGTSCAWSVFNNPQPSDIEQGNLVGDCWLLS 157
Query: 538 AVANLTLYRKLFFQVVPDDQ 597
A+A + ++ ++P Q
Sbjct: 158 AMALIAEKPEVLDAIIPKKQ 177
>Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical
protein T11A5.6 protein.
Length = 718
Score = 34.3 bits (75), Expect = 0.075
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +1
Query: 427 ITWLRPGEI-----SDNPQLFVEGYSRFDVQQGEL-GDCWLLAAVANLTLYRKLFFQVVP 588
+ WLRP ++ +P + D++QG L GDCWL++A+A + + ++P
Sbjct: 168 LNWLRPSQMFTKDGRSSPWSVLNNPRPSDIEQGTLVGDCWLMSAMALIAERPDVLDDIIP 227
Query: 589 DDQ 597
Q
Sbjct: 228 KKQ 230
>Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical
protein T11A5.6 protein.
Length = 718
Score = 34.3 bits (75), Expect = 0.075
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +1
Query: 427 ITWLRPGEI-----SDNPQLFVEGYSRFDVQQGEL-GDCWLLAAVANLTLYRKLFFQVVP 588
+ WLRP ++ +P + D++QG L GDCWL++A+A + + ++P
Sbjct: 168 LNWLRPSQMFTKDGRSSPWSVLNNPRPSDIEQGTLVGDCWLMSAMALIAERPDVLDDIIP 227
Query: 589 DDQ 597
Q
Sbjct: 228 KKQ 230
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 30.7 bits (66), Expect = 0.92
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Frame = +1
Query: 202 NEVFQKKEVEQKRFLPSIKNYKVLG---------ETRPSS--FGPATYQDFKDIRSRCLA 348
+E + +V KR LP++KN++VL ET PS FG T +D + I+ C
Sbjct: 313 SESEDEDDVGVKRRLPAVKNHRVLDSDEEDDVIEETLPSQDVFGSGTLEDSETIKEICEK 372
Query: 349 EGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISD 459
G E ++ L K L R + L GE SD
Sbjct: 373 SGEFTE-----KIETVLEEKTELKRVV--LSDGEDSD 402
>Z35663-14|CAA84733.1| 805|Caenorhabditis elegans Hypothetical
protein T04A8.16 protein.
Length = 805
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +1
Query: 433 WLRPGEISDNPQLFVEGYSRFDVQQGELGDCWLLAAVANLTLYRKLFFQVVPDDQSFDED 612
W R E+ +NP + + ++Q + DC +++++ LY K F + + F +D
Sbjct: 266 WKRVSELFENPTI-IFSIDCHTIKQTVISDCSFISSLSIAALYEKRFKKQLVTSIIFPQD 324
Query: 613 YAG 621
G
Sbjct: 325 ANG 327
>U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform b protein.
Length = 557
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 184 ALGNIINE--VFQK-KEVEQKRFLPSIKNYKVLGETRPSSFGP 303
ALG ++ + VF+ K+ + +RFL Y+V+ E RP GP
Sbjct: 451 ALGAVLFDPNVFESPKQFKPERFLDEEGKYRVMEEFRPFGLGP 493
>U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform a protein.
Length = 572
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 184 ALGNIINE--VFQK-KEVEQKRFLPSIKNYKVLGETRPSSFGP 303
ALG ++ + VF+ K+ + +RFL Y+V+ E RP GP
Sbjct: 466 ALGAVLFDPNVFESPKQFKPERFLDEEGKYRVMEEFRPFGLGP 508
>AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform A
protein.
Length = 557
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 184 ALGNIINE--VFQK-KEVEQKRFLPSIKNYKVLGETRPSSFGP 303
ALG ++ + VF+ K+ + +RFL Y+V+ E RP GP
Sbjct: 451 ALGAVLFDPNVFESPKQFKPERFLDEEGKYRVMEEFRPFGLGP 493
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = -2
Query: 559 KVSSWQRQPTANNRPTLLVGRRSDCSLRRKVEGCR*FPQV*AK*WACPGSPCSRGCGPRP 380
+V+S+ R + P L + C+ + C PQ PG P SRG RP
Sbjct: 105 QVNSYARVNSYATAPVLQHPTQQQCNCAPQANNCPPGPQGPTGYPGAPGEPGSRGLDGRP 164
Query: 379 ETRGL 365
G+
Sbjct: 165 GANGV 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,515,533
Number of Sequences: 27780
Number of extensions: 340836
Number of successful extensions: 975
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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