Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1328
(722 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060728-1|AAL28276.1| 452|Drosophila melanogaster GH17451p pro... 61 2e-09
AE014297-1606|AAF54885.2| 452|Drosophila melanogaster CG8063-PA... 61 2e-09
BT003613-1|AAO39616.1| 447|Drosophila melanogaster GH16592p pro... 59 5e-09
AE014297-1605|AAF54884.1| 429|Drosophila melanogaster CG18550-P... 59 5e-09
AY113601-1|AAM29606.1| 438|Drosophila melanogaster RH54244p pro... 42 3e-05
AE014134-2553|AAF53432.3| 438|Drosophila melanogaster CG4182-PA... 42 3e-05
X04427-1|CAA28024.1| 541|Drosophila melanogaster yellow gene pr... 38 0.018
AL023873-2|CAA19640.1| 541|Drosophila melanogaster EG:125H10.2,... 38 0.018
AE014298-26|AAF45497.1| 541|Drosophila melanogaster CG3757-PA p... 38 0.018
AY071114-1|AAL48736.1| 358|Drosophila melanogaster RE16722p pro... 35 0.13
AE014135-44|AAF59358.2| 463|Drosophila melanogaster CG1629-PA p... 35 0.13
AY118575-1|AAM49944.1| 453|Drosophila melanogaster LD43175p pro... 32 0.91
AF237613-1|AAF60328.1| 453|Drosophila melanogaster YELLOW-B pro... 32 0.91
AE014134-2765|AAF53564.1| 453|Drosophila melanogaster CG17914-P... 32 0.91
>AY060728-1|AAL28276.1| 452|Drosophila melanogaster GH17451p
protein.
Length = 452
Score = 60.9 bits (141), Expect = 2e-09
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Frame = +3
Query: 297 TVNYINNFDN--EKELVLRPFPNA-----NVGKE-LISVF-TMVEAICSRIWFVDTGYLD 449
T+NYI+ ++ + LR +PN N E L+SV+ T V+A C R+WF+DTG L+
Sbjct: 127 TLNYIDLAEDGSNRSPKLRAYPNFALNQFNASAENLVSVYRTSVDA-CQRLWFIDTGMLE 185
Query: 450 IPGIRKQVKPAALLLFNKYEEQPHFRKDIDNAFLHNGITSGLRSLSVDFIL-PCSESYVY 626
P R+Q++ ++ + + +Q R D+ + G GL S++VD C ++Y Y
Sbjct: 186 YPNNRQQIRRPSIWVVDLATDQVLKRFDVPESIAETG--RGLASITVDVKAGQCGDAYAY 243
Query: 627 ITDDTTRDLIVF 662
I D R L V+
Sbjct: 244 IPDLVYRRLYVY 255
>AE014297-1606|AAF54885.2| 452|Drosophila melanogaster CG8063-PA
protein.
Length = 452
Score = 60.9 bits (141), Expect = 2e-09
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Frame = +3
Query: 297 TVNYINNFDN--EKELVLRPFPNA-----NVGKE-LISVF-TMVEAICSRIWFVDTGYLD 449
T+NYI+ ++ + LR +PN N E L+SV+ T V+A C R+WF+DTG L+
Sbjct: 127 TLNYIDLAEDGSNRSPKLRAYPNFALNQFNASAENLVSVYRTSVDA-CQRLWFIDTGMLE 185
Query: 450 IPGIRKQVKPAALLLFNKYEEQPHFRKDIDNAFLHNGITSGLRSLSVDFIL-PCSESYVY 626
P R+Q++ ++ + + +Q R D+ + G GL S++VD C ++Y Y
Sbjct: 186 YPNNRQQIRRPSIWVVDLATDQVLKRFDVPESIAETG--RGLASITVDVKAGQCGDAYAY 243
Query: 627 ITDDTTRDLIVF 662
I D R L V+
Sbjct: 244 IPDLVYRRLYVY 255
>BT003613-1|AAO39616.1| 447|Drosophila melanogaster GH16592p
protein.
Length = 447
Score = 59.3 bits (137), Expect = 5e-09
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Frame = +3
Query: 297 TVNYINNFDN--EKELVLRPFPNANVGK------ELISVFTMVEAICSRIWFVDTGYLDI 452
T+NYI+ + + LR +PN V + L+SV+ +C R+WFVDTG L+
Sbjct: 122 TLNYIDLAKDGWSQSPHLRAYPNLAVNQYNASEQNLVSVYRTSVDVCGRLWFVDTGMLEF 181
Query: 453 PGIRKQVKPAALLLFNKYEEQPHFRKDIDNAFLHNGITSGLRSLSVDF-ILPCSESYVYI 629
P R+Q++ ++ + + ++ R +I + + G GL S+++D C+++Y YI
Sbjct: 182 PNNRQQIRHPSIWVIDLANDRLLKRFEIPQSIVEIG--RGLASITIDVGARRCNDAYAYI 239
Query: 630 TDDTTRDLIVF 662
D R L V+
Sbjct: 240 PDLVNRRLHVY 250
>AE014297-1605|AAF54884.1| 429|Drosophila melanogaster CG18550-PA
protein.
Length = 429
Score = 59.3 bits (137), Expect = 5e-09
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Frame = +3
Query: 297 TVNYINNFDN--EKELVLRPFPNANVGK------ELISVFTMVEAICSRIWFVDTGYLDI 452
T+NYI+ + + LR +PN V + L+SV+ +C R+WFVDTG L+
Sbjct: 104 TLNYIDLAKDGWSQSPHLRAYPNLAVNQYNASEQNLVSVYRTSVDVCGRLWFVDTGMLEF 163
Query: 453 PGIRKQVKPAALLLFNKYEEQPHFRKDIDNAFLHNGITSGLRSLSVDF-ILPCSESYVYI 629
P R+Q++ ++ + + ++ R +I + + G GL S+++D C+++Y YI
Sbjct: 164 PNNRQQIRHPSIWVIDLANDRLLKRFEIPQSIVEIG--RGLASITIDVGARRCNDAYAYI 221
Query: 630 TDDTTRDLIVF 662
D R L V+
Sbjct: 222 PDLVNRRLHVY 232
>AY113601-1|AAM29606.1| 438|Drosophila melanogaster RH54244p
protein.
Length = 438
Score = 42.3 bits (95), Expect(2) = 3e-05
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +3
Query: 378 LISVFTMVEAICSRIWFVDTGYLDIPGIRKQVKPAALLLFN 500
+IS F + +C R+W +DTG DI G KQ+ P ++L+F+
Sbjct: 147 VISTFRIQVDVCDRLWVLDTGLADILGSPKQITPNSILVFD 187
Score = 23.8 bits (49), Expect(2) = 3e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 297 TVNYINNFDNEKELVLRPFPNANVGKELISV 389
T+NYI+ EK L P+P+ K I V
Sbjct: 86 TLNYIDINSTEKSPKLHPYPSWEANKLPIDV 116
>AE014134-2553|AAF53432.3| 438|Drosophila melanogaster CG4182-PA
protein.
Length = 438
Score = 42.3 bits (95), Expect(2) = 3e-05
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +3
Query: 378 LISVFTMVEAICSRIWFVDTGYLDIPGIRKQVKPAALLLFN 500
+IS F + +C R+W +DTG DI G KQ+ P ++L+F+
Sbjct: 147 VISTFRIQVDVCDRLWVLDTGLADILGSPKQITPNSILVFD 187
Score = 23.8 bits (49), Expect(2) = 3e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 297 TVNYINNFDNEKELVLRPFPNANVGKELISV 389
T+NYI+ EK L P+P+ K I V
Sbjct: 86 TLNYIDINSTEKSPKLHPYPSWEANKLPIDV 116
>X04427-1|CAA28024.1| 541|Drosophila melanogaster yellow gene
protein.
Length = 541
Score = 37.5 bits (83), Expect = 0.018
Identities = 40/190 (21%), Positives = 69/190 (36%), Gaps = 10/190 (5%)
Frame = +3
Query: 123 YTNDSDYEYKEGTFQFQNVALEDHEKF---LIRQNLIPYNFIDDVXXXXXXXXXXXXXXX 293
Y Y + + F F N L+D I QN +P
Sbjct: 23 YKLQERYSWSQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFGNRLFVTVPRWRDGIP 82
Query: 294 FTVNYIN---NFDNEKELVLRPFPNANVGKELISVFTMVEAI----CSRIWFVDTGYLDI 452
T+ YIN + EL+ P +N + + T I C R+W +DTG + I
Sbjct: 83 ATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGI 142
Query: 453 PGIRKQVKPAALLLFNKYEEQPHFRKDIDNAFLHNGITSGLRSLSVDFILPCSESYVYIT 632
P A+ +F+ + R ++ + + + +++VD C ++Y Y
Sbjct: 143 GNTTTNPCPYAVNVFDLTTDTRIRRYELPG--VDTNPNTFIANIAVDIGKNCDDAYAYFA 200
Query: 633 DDTTRDLIVF 662
D+ LI +
Sbjct: 201 DELGYGLIAY 210
>AL023873-2|CAA19640.1| 541|Drosophila melanogaster
EG:125H10.2,FBgn0004034;y protein.
Length = 541
Score = 37.5 bits (83), Expect = 0.018
Identities = 40/190 (21%), Positives = 69/190 (36%), Gaps = 10/190 (5%)
Frame = +3
Query: 123 YTNDSDYEYKEGTFQFQNVALEDHEKF---LIRQNLIPYNFIDDVXXXXXXXXXXXXXXX 293
Y Y + + F F N L+D I QN +P
Sbjct: 23 YKLQERYSWSQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFGNRLFVTVPRWRDGIP 82
Query: 294 FTVNYIN---NFDNEKELVLRPFPNANVGKELISVFTMVEAI----CSRIWFVDTGYLDI 452
T+ YIN + EL+ P +N + + T I C R+W +DTG + I
Sbjct: 83 ATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGI 142
Query: 453 PGIRKQVKPAALLLFNKYEEQPHFRKDIDNAFLHNGITSGLRSLSVDFILPCSESYVYIT 632
P A+ +F+ + R ++ + + + +++VD C ++Y Y
Sbjct: 143 GNTTTNPCPYAVNVFDLTTDTRIRRYELPG--VDTNPNTFIANIAVDIGKNCDDAYAYFA 200
Query: 633 DDTTRDLIVF 662
D+ LI +
Sbjct: 201 DELGYGLIAY 210
>AE014298-26|AAF45497.1| 541|Drosophila melanogaster CG3757-PA
protein.
Length = 541
Score = 37.5 bits (83), Expect = 0.018
Identities = 40/190 (21%), Positives = 69/190 (36%), Gaps = 10/190 (5%)
Frame = +3
Query: 123 YTNDSDYEYKEGTFQFQNVALEDHEKF---LIRQNLIPYNFIDDVXXXXXXXXXXXXXXX 293
Y Y + + F F N L+D I QN +P
Sbjct: 23 YKLQERYSWSQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFGNRLFVTVPRWRDGIP 82
Query: 294 FTVNYIN---NFDNEKELVLRPFPNANVGKELISVFTMVEAI----CSRIWFVDTGYLDI 452
T+ YIN + EL+ P +N + + T I C R+W +DTG + I
Sbjct: 83 ATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGI 142
Query: 453 PGIRKQVKPAALLLFNKYEEQPHFRKDIDNAFLHNGITSGLRSLSVDFILPCSESYVYIT 632
P A+ +F+ + R ++ + + + +++VD C ++Y Y
Sbjct: 143 GNTTTNPCPYAVNVFDLTTDTRIRRYELPG--VDTNPNTFIANIAVDIGKNCDDAYAYFA 200
Query: 633 DDTTRDLIVF 662
D+ LI +
Sbjct: 201 DELGYGLIAY 210
>AY071114-1|AAL48736.1| 358|Drosophila melanogaster RE16722p
protein.
Length = 358
Score = 34.7 bits (76), Expect = 0.13
Identities = 23/106 (21%), Positives = 51/106 (48%)
Frame = +3
Query: 354 PNANVGKELISVFTMVEAICSRIWFVDTGYLDIPGIRKQVKPAALLLFNKYEEQPHFRKD 533
PN +L+SV+ C RIW +D+G ++ Q+ P +++++ ++ R +
Sbjct: 139 PNNPDCSKLMSVYRTAVDRCDRIWLIDSGIVNATINLNQICPPKIVVYDLKSDELIVRYN 198
Query: 534 IDNAFLHNGITSGLRSLSVDFILPCSESYVYITDDTTRDLIVFLAS 671
++ + H S ++ VD C +++ ++D L+V+ S
Sbjct: 199 LEAS--HVKQDSLHSNIVVDIGEDCDDAHAIVSDVWRFGLLVYSLS 242
>AE014135-44|AAF59358.2| 463|Drosophila melanogaster CG1629-PA
protein.
Length = 463
Score = 34.7 bits (76), Expect = 0.13
Identities = 23/106 (21%), Positives = 51/106 (48%)
Frame = +3
Query: 354 PNANVGKELISVFTMVEAICSRIWFVDTGYLDIPGIRKQVKPAALLLFNKYEEQPHFRKD 533
PN +L+SV+ C RIW +D+G ++ Q+ P +++++ ++ R +
Sbjct: 139 PNNPDCSKLMSVYRTAVDRCDRIWLIDSGIVNATINLNQICPPKIVVYDLKSDELIVRYN 198
Query: 534 IDNAFLHNGITSGLRSLSVDFILPCSESYVYITDDTTRDLIVFLAS 671
++ + H S ++ VD C +++ ++D L+V+ S
Sbjct: 199 LEAS--HVKQDSLHSNIVVDIGEDCDDAHAIVSDVWRFGLLVYSLS 242
>AY118575-1|AAM49944.1| 453|Drosophila melanogaster LD43175p
protein.
Length = 453
Score = 31.9 bits (69), Expect = 0.91
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Frame = +3
Query: 315 NFDNEKELVLRPFPN------ANVGKELISVFTMVEAICSRIWFVDTGYLDIPGIRKQVK 476
N + K L+PFP+ EL+S F + C R+W +D+ I G+ +Q K
Sbjct: 88 NDTSSKGPALKPFPSWQAHNLQEAEPELVSPFRVRADRCGRLWVLDS---RISGVLEQTK 144
Query: 477 ---PAALLLFNKYEEQPHFRKDIDNAFLHNGITSGLRSLSVDFILPCSESYVYITDDTTR 647
A LL+++ + + R + L G S L +L+V+ C ++ Y D +
Sbjct: 145 IYGAAQLLVYDLHNDDLLRRHVLPAGQLKQG--SLLANLAVE-DSDCENTFAYAADLGSP 201
Query: 648 DLIVF 662
L+V+
Sbjct: 202 GLVVY 206
>AF237613-1|AAF60328.1| 453|Drosophila melanogaster YELLOW-B
protein.
Length = 453
Score = 31.9 bits (69), Expect = 0.91
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Frame = +3
Query: 315 NFDNEKELVLRPFPN------ANVGKELISVFTMVEAICSRIWFVDTGYLDIPGIRKQVK 476
N + K L+PFP+ EL+S F + C R+W +D+ I G+ +Q K
Sbjct: 88 NDTSSKGPALKPFPSWQAHNLQEAEPELVSPFRVRADRCGRLWVLDS---RISGVLEQTK 144
Query: 477 ---PAALLLFNKYEEQPHFRKDIDNAFLHNGITSGLRSLSVDFILPCSESYVYITDDTTR 647
A LL+++ + + R + L G S L +L+V+ C ++ Y D +
Sbjct: 145 IYGAAQLLVYDLHNDDLLRRHVLPAGQLKQG--SLLANLAVE-DSDCENTFAYAADLGSP 201
Query: 648 DLIVF 662
L+V+
Sbjct: 202 GLVVY 206
>AE014134-2765|AAF53564.1| 453|Drosophila melanogaster CG17914-PA
protein.
Length = 453
Score = 31.9 bits (69), Expect = 0.91
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Frame = +3
Query: 315 NFDNEKELVLRPFPN------ANVGKELISVFTMVEAICSRIWFVDTGYLDIPGIRKQVK 476
N + K L+PFP+ EL+S F + C R+W +D+ I G+ +Q K
Sbjct: 88 NDTSSKGPALKPFPSWQAHNLQEAEPELVSPFRVRADRCGRLWVLDS---RISGVLEQTK 144
Query: 477 ---PAALLLFNKYEEQPHFRKDIDNAFLHNGITSGLRSLSVDFILPCSESYVYITDDTTR 647
A LL+++ + + R + L G S L +L+V+ C ++ Y D +
Sbjct: 145 IYGAAQLLVYDLHNDDLLRRHVLPAGQLKQG--SLLANLAVE-DSDCENTFAYAADLGSP 201
Query: 648 DLIVF 662
L+V+
Sbjct: 202 GLVVY 206
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,515,748
Number of Sequences: 53049
Number of extensions: 563872
Number of successful extensions: 1329
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -