Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1325
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 265 2e-71
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 263 9e-71
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 105 3e-23
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 98 4e-21
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 98 4e-21
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 90 1e-18
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 81 7e-16
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 80 2e-15
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 59 3e-09
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 54 1e-07
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 41 7e-04
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 41 7e-04
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 41 7e-04
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 41 7e-04
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 41 7e-04
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 40 0.002
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 39 0.003
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 39 0.004
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 36 0.019
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 36 0.019
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 36 0.019
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 36 0.019
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 36 0.019
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 36 0.025
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 36 0.025
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 36 0.033
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 36 0.033
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 36 0.033
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 33 0.13
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 33 0.13
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 33 0.23
U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 31 0.54
AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion transpo... 31 0.94
AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion transpo... 31 0.94
AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate perme... 31 0.94
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 30 1.2
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 30 1.2
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 30 1.2
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 30 1.2
U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 30 1.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 1.6
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 1.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 1.6
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 30 1.6
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 29 2.2
U29244-11|AAC71092.1| 201|Caenorhabditis elegans Hypothetical p... 29 2.9
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 29 2.9
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z75527-4|CAA99779.2| 316|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 29 3.8
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 29 3.8
DQ178236-1|ABA18178.1| 316|Caenorhabditis elegans putative low ... 29 3.8
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 28 5.0
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 28 5.0
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 28 6.6
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 28 6.6
AF016417-1|AAK68335.1| 241|Caenorhabditis elegans Hypothetical ... 28 6.6
Z83125-2|CAB05621.2| 391|Caenorhabditis elegans Hypothetical pr... 27 8.7
U64837-9|AAB04843.2| 309|Caenorhabditis elegans Hypothetical pr... 27 8.7
U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical pr... 27 8.7
U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical pr... 27 8.7
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 27 8.7
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 27 8.7
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 27 8.7
AY037796-1|AAK94761.1| 283|Caenorhabditis elegans GLY-17 protein. 27 8.7
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024881-5|AAK71415.1| 668|Caenorhabditis elegans Na/ca exchang... 27 8.7
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 265 bits (650), Expect = 2e-71
Identities = 124/181 (68%), Positives = 151/181 (83%)
Frame = +1
Query: 52 QFKLFTMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL 231
QF P + +E R KA YR+KL E +++E +LK+ R + ++TKQ+DKSEND+
Sbjct: 5 QFSNMVEPTGPAIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDI 64
Query: 232 KALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTI 411
K+LQSVGQIVGEVLKQL+EEKFIVKATNGPRYVVGCRR ++K +LK GTRV+LDMTTLTI
Sbjct: 65 KSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTI 124
Query: 412 MRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITPP 591
MR LPREVDPLVY MSHEDPG+++YS +GGL EQIR+LREV+ELPL+NPELF RVGITPP
Sbjct: 125 MRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPP 184
Query: 592 Q 594
+
Sbjct: 185 K 185
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/29 (75%), Positives = 25/29 (86%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
LF+ V + P KGCLL+GPPGTGKTLLARA
Sbjct: 175 LFKRVGITPPKGCLLFGPPGTGKTLLARA 203
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 263 bits (644), Expect = 9e-71
Identities = 122/174 (70%), Positives = 149/174 (85%)
Frame = +1
Query: 73 PASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVG 252
P + +E R KA YR+KL E +++E +LK+ R + ++TKQ+DKSEND+K+LQSVG
Sbjct: 4 PTGPAIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVG 63
Query: 253 QIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPRE 432
QIVGEVLKQL+EEKFIVKATNGPRYVVGCRR ++K +LK GTRV+LDMTTLTIMR LPRE
Sbjct: 64 QIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPRE 123
Query: 433 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITPPQ 594
VDPLVY MSHEDPG+++YS +GGL EQIR+LREV+ELPL+NPELF RVGITPP+
Sbjct: 124 VDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPK 177
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/29 (75%), Positives = 25/29 (86%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
LF+ V + P KGCLL+GPPGTGKTLLARA
Sbjct: 167 LFKRVGITPPKGCLLFGPPGTGKTLLARA 195
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 105 bits (252), Expect = 3e-23
Identities = 58/158 (36%), Positives = 91/158 (57%)
Frame = +1
Query: 121 DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFI 300
D ++K+ + + RL+ R++L + + +L+ L G VGEV K + ++K +
Sbjct: 40 DAQQKVADKSQNVRRLQAQRNELNTKVRML---KEELQQLHEQGSYVGEVSKAMDKKKVL 96
Query: 301 VKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDV 480
VK +YVV + +D N L G RVAL + + + LP +VDPLV M E D
Sbjct: 97 VKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDS 156
Query: 481 TYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITPPQ 594
TY +GGL +QI++++EVIELP+ +PELF +GI P+
Sbjct: 157 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 194
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/29 (68%), Positives = 25/29 (86%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSL-HPKGCLLYGPPGTGKTLLARA 649
LF+++ + PKG LL+GPPGTGKTLLARA
Sbjct: 184 LFDALGIAQPKGVLLFGPPGTGKTLLARA 212
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 98.3 bits (234), Expect = 4e-21
Identities = 54/137 (39%), Positives = 77/137 (56%)
Frame = +1
Query: 184 QLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNK 363
Q K+L + + ++ L G VGEV K + ++K +VK +Y+V +D +
Sbjct: 53 QQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDIST 112
Query: 364 LKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIEL 543
L GTRVAL I LP +VDPLV M E D TY +GGL QI++++EVIEL
Sbjct: 113 LAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIEL 172
Query: 544 PLMNPELFVRVGITPPQ 594
P+ +PELF +GI P+
Sbjct: 173 PVKHPELFDALGIAQPK 189
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/29 (72%), Positives = 25/29 (86%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSL-HPKGCLLYGPPGTGKTLLARA 649
LF+++ + PKG LLYGPPGTGKTLLARA
Sbjct: 179 LFDALGIAQPKGVLLYGPPGTGKTLLARA 207
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 98.3 bits (234), Expect = 4e-21
Identities = 54/137 (39%), Positives = 77/137 (56%)
Frame = +1
Query: 184 QLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNK 363
Q K+L + + ++ L G VGEV K + ++K +VK +Y+V +D +
Sbjct: 74 QQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDIST 133
Query: 364 LKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIEL 543
L GTRVAL I LP +VDPLV M E D TY +GGL QI++++EVIEL
Sbjct: 134 LAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIEL 193
Query: 544 PLMNPELFVRVGITPPQ 594
P+ +PELF +GI P+
Sbjct: 194 PVKHPELFDALGIAQPK 210
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/29 (72%), Positives = 25/29 (86%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSL-HPKGCLLYGPPGTGKTLLARA 649
LF+++ + PKG LLYGPPGTGKTLLARA
Sbjct: 200 LFDALGIAQPKGVLLYGPPGTGKTLLARA 228
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 89.8 bits (213), Expect = 1e-18
Identities = 45/137 (32%), Positives = 80/137 (58%)
Frame = +1
Query: 184 QLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNK 363
+ ++L K+ ++ ++K +QSV ++G+ L+ + + IV +T G Y V LD+
Sbjct: 60 ETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDREL 119
Query: 364 LKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIEL 543
LK G VAL + ++ LP E D + + ++ D++Y IGGL Q +++RE +EL
Sbjct: 120 LKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVEL 179
Query: 544 PLMNPELFVRVGITPPQ 594
PL + EL+ ++GI PP+
Sbjct: 180 PLTHGELYQQIGIDPPR 196
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/33 (48%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +2
Query: 554 TQSCLFESVSLHP-KGCLLYGPPGTGKTLLARA 649
T L++ + + P +G L+YGPPG GKT+LA+A
Sbjct: 182 THGELYQQIGIDPPRGVLMYGPPGCGKTMLAKA 214
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 81.0 bits (191), Expect = 7e-16
Identities = 37/103 (35%), Positives = 61/103 (59%)
Frame = +1
Query: 286 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 465
+ ++++ ++VV + ++ G RV +D I LP ++DP V M E
Sbjct: 110 DPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVE 169
Query: 466 DPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITPPQ 594
+ DVTYS +GG ++QI +LREV+E PL++PE +V +GI PP+
Sbjct: 170 EKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPK 212
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
PKG LLYGPPGTGKTL ARA
Sbjct: 211 PKGVLLYGPPGTGKTLCARA 230
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/155 (25%), Positives = 82/155 (52%)
Frame = +1
Query: 130 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKA 309
+++ ++ +E + +++LK ++ ++ + L+ VG + + + ++ IV
Sbjct: 69 ERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVST 128
Query: 310 TNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYS 489
G + V +DK +L+ G V L+ ++ L + DP+V M E TY+
Sbjct: 129 NVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYA 188
Query: 490 AIGGLQEQIRQLREVIELPLMNPELFVRVGITPPQ 594
+GGL +QI++++E +ELPL +PE + +GI PP+
Sbjct: 189 DVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPK 223
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
PKG +LYG PGTGKTLLA+A
Sbjct: 222 PKGVILYGCPGTGKTLLAKA 241
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/99 (31%), Positives = 53/99 (53%)
Frame = +1
Query: 298 IVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGD 477
++K + Y + +D ++LK G V ++ + I+ LP E D V M ++
Sbjct: 114 VIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPT 173
Query: 478 VTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITPPQ 594
YS IGG +QI++L E + LP+ + + FV +GI PP+
Sbjct: 174 EQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPK 212
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/28 (64%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +2
Query: 569 FESVSLHP-KGCLLYGPPGTGKTLLARA 649
F ++ +HP KG L+YGPPGTGKT++ARA
Sbjct: 203 FVNLGIHPPKGVLMYGPPGTGKTMMARA 230
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/55 (40%), Positives = 37/55 (67%)
Frame = +1
Query: 430 EVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITPPQ 594
E DP+ E D+ Y +GG+++Q+ Q++E++ELPL +P+LF +GI PP+
Sbjct: 191 EGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPR 245
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/29 (62%), Positives = 25/29 (86%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
LF+++ + P +G LL+GPPGTGKTL+ARA
Sbjct: 235 LFKAIGIKPPRGILLFGPPGTGKTLIARA 263
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +1
Query: 475 DVTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITP 588
+ T+S IGGLQ R+L+E+++ P+ +PE +++ G+ P
Sbjct: 479 NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQP 516
Score = 35.1 bits (77), Expect = 0.044
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 593 KGCLLYGPPGTGKTLLARA 649
+G L YGPPG GKTLLA+A
Sbjct: 518 RGVLFYGPPGCGKTLLAKA 536
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +1
Query: 430 EVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITPPQ 594
E DP+ E +V Y +GG+++Q+ Q++E++ELPL +P+LF +G+ PP+
Sbjct: 190 EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPR 244
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/29 (62%), Positives = 25/29 (86%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
LF+++ + P +G LL+GPPGTGKTL+ARA
Sbjct: 234 LFKAIGVKPPRGILLFGPPGTGKTLIARA 262
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +1
Query: 475 DVTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITP 588
+ T+S IGGLQ R+L+E+++ P+ +PE +++ G+ P
Sbjct: 478 NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQP 515
Score = 35.1 bits (77), Expect = 0.044
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 593 KGCLLYGPPGTGKTLLARA 649
+G L YGPPG GKTLLA+A
Sbjct: 517 RGVLFYGPPGCGKTLLAKA 535
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +1
Query: 430 EVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITPPQ 594
E DP+ E +V Y +GG+++Q+ Q++E++ELPL +P+LF +G+ PP+
Sbjct: 190 EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPR 244
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/29 (62%), Positives = 25/29 (86%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
LF+++ + P +G LL+GPPGTGKTL+ARA
Sbjct: 234 LFKAIGVKPPRGILLFGPPGTGKTLIARA 262
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +1
Query: 475 DVTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITP 588
+ T+S IGGLQ R+L+E+++ P+ +PE +++ G+ P
Sbjct: 478 NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQP 515
Score = 35.1 bits (77), Expect = 0.044
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 593 KGCLLYGPPGTGKTLLARA 649
+G L YGPPG GKTLLA+A
Sbjct: 517 RGVLFYGPPGCGKTLLAKA 535
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Frame = +1
Query: 190 KDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPR--YVVGCRRQLDKNK 363
+ L Q + + +++L+ + V + +EK V G R + V +DK+
Sbjct: 76 RPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKHAVVVVEGSRREWYVPILSIVDKDL 135
Query: 364 LKGGTRVALDMTTL------TIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQL 525
L+ V + + I+ L ++D E T+ IGG + QI++L
Sbjct: 136 LRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQEL 195
Query: 526 REVIELPLMNPELFVRVGITPPQ 594
+E +ELPL +PE + +GIT P+
Sbjct: 196 KESVELPLTHPEYYEEMGITAPK 218
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
PKG +LYG PGTGKTLLA+A
Sbjct: 217 PKGVILYGEPGTGKTLLAKA 236
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
+FE ++P KG + YGPPGTGKTL+ARA
Sbjct: 416 VFEKFRINPPKGVVFYGPPGTGKTLVARA 444
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 349 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 528
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 351 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 404
Query: 529 EVIELPLMNPELFVRVGITPPQ 594
EV+ P++ PE+F + I PP+
Sbjct: 405 EVVLFPMLYPEVFEKFRINPPK 426
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
+FE ++P KG + YGPPGTGKTL+ARA
Sbjct: 414 VFEKFRINPPKGVVFYGPPGTGKTLVARA 442
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 349 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 528
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 349 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 402
Query: 529 EVIELPLMNPELFVRVGITPPQ 594
EV+ P++ PE+F + I PP+
Sbjct: 403 EVVLFPMLYPEVFEKFRINPPK 424
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
+FE ++P KG + YGPPGTGKTL+ARA
Sbjct: 416 VFEKFRINPPKGVVFYGPPGTGKTLVARA 444
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 349 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 528
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 351 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 404
Query: 529 EVIELPLMNPELFVRVGITPPQ 594
EV+ P++ PE+F + I PP+
Sbjct: 405 EVVLFPMLYPEVFEKFRINPPK 426
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
+FE ++P KG + YGPPGTGKTL+ARA
Sbjct: 416 VFEKFRINPPKGVVFYGPPGTGKTLVARA 444
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 349 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 528
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 351 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 404
Query: 529 EVIELPLMNPELFVRVGITPPQ 594
EV+ P++ PE+F + I PP+
Sbjct: 405 EVVLFPMLYPEVFEKFRINPPK 426
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
+FE ++P KG + YGPPGTGKTL+ARA
Sbjct: 414 VFEKFRINPPKGVVFYGPPGTGKTLVARA 442
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 349 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 528
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 349 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 402
Query: 529 EVIELPLMNPELFVRVGITPPQ 594
EV+ P++ PE+F + I PP+
Sbjct: 403 EVVLFPMLYPEVFEKFRINPPK 424
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
+FE ++P KG + YGPPGTGKTL+ARA
Sbjct: 416 VFEKFRINPPKGVVFYGPPGTGKTLVARA 444
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 349 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 528
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 351 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 404
Query: 529 EVIELPLMNPELFVRVGITPPQ 594
EV+ P++ PE+F + I PP+
Sbjct: 405 EVVLFPMLYPEVFEKFRINPPK 426
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
PKG LL GPPGTGKTLLARA
Sbjct: 234 PKGVLLVGPPGTGKTLLARA 253
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLHP-KGCLLYGPPGTGKTLLARA 649
+FE ++P KG + YGPPGTGKTL+ARA
Sbjct: 416 VFEKFRINPPKGVVFYGPPGTGKTLVARA 444
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 349 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 528
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 351 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 404
Query: 529 EVIELPLMNPELFVRVGITPPQ 594
EV+ P++ PE+F + I PP+
Sbjct: 405 EVVLFPMLYPEVFEKFRINPPK 426
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 566 LFESVSLHPKGCLLYGPPGTGKTLLAR 646
+F + PKG LL+GPPGTGKT++ R
Sbjct: 341 VFTGIRAPPKGVLLFGPPGTGKTMIGR 367
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/59 (20%), Positives = 29/59 (49%)
Frame = +1
Query: 412 MRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITP 588
++H + L+ + ++ ++ + GL+ + LRE++ LP P++F + P
Sbjct: 291 LKHFDENIISLIESEIMSVNNEIGWADVAGLEGAKKALREIVVLPFKRPDVFTGIRAPP 349
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
P+G LLYGPPG GKTLLA+A
Sbjct: 114 PRGILLYGPPGCGKTLLAKA 133
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
P+G LLYGPPG GKTLLA+A
Sbjct: 117 PRGILLYGPPGCGKTLLAKA 136
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
PKG +L GPPGTGKTLLA+A
Sbjct: 326 PKGAILTGPPGTGKTLLAKA 345
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 587 HPKGCLLYGPPGTGKTLLAR 646
H +G LL+GPPGTGKTL+AR
Sbjct: 329 HVRGILLFGPPGTGKTLMAR 348
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 587 HPKGCLLYGPPGTGKTLLAR 646
H +G LL+GPPGTGKTL+AR
Sbjct: 329 HVRGILLFGPPGTGKTLMAR 348
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 587 HPKGCLLYGPPGTGKTLLAR 646
H +G LL+GPPGTGKTL+AR
Sbjct: 263 HVRGILLFGPPGTGKTLMAR 282
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2
Query: 566 LFESVSLHPKGCLLYGPPGTGKTLLARA 649
LF+ + KG LL+GPPG GKTLLA+A
Sbjct: 203 LFKGLRQPVKGILLFGPPGNGKTLLAKA 230
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
P G LLYGPPG KTL+ARA
Sbjct: 493 PAGILLYGPPGCSKTLIARA 512
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 475 DVTYSAIGGLQEQIRQLREVIELPLMNPELFVRVGITPP 591
+V+++ IGG +E ++++ + P +PE F R GI PP
Sbjct: 455 NVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPP 493
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 578 VSLHPKGCLLYGPPGTGKTLLARA 649
+ P+G LL GPPG GKTLLA+A
Sbjct: 564 IDCRPQGILLCGPPGCGKTLLAKA 587
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
P+G +++GPPG GKT+ A+A
Sbjct: 239 PRGFIVHGPPGCGKTMFAQA 258
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 578 VSLHPKGCLLYGPPGTGKTLLARA 649
+ P+G LL GPPG GKTLLA+A
Sbjct: 564 IDCRPQGILLCGPPGCGKTLLAKA 587
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
P+G +++GPPG GKT+ A+A
Sbjct: 239 PRGFIVHGPPGCGKTMFAQA 258
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
P+G LL GPPG GKTLLA+A
Sbjct: 318 PRGALLTGPPGCGKTLLAKA 337
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 590 PKGCLLYGPPGTGKTLLARA 649
P+G LL GPPG GKTLLA+A
Sbjct: 318 PRGALLTGPPGCGKTLLAKA 337
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/29 (65%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLH-PKGCLLYGPPGTGKTLLARA 649
LFESV + KG LL+GP G GKTLLA A
Sbjct: 27 LFESVGVPVSKGILLHGPSGCGKTLLANA 55
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 493 IGGLQEQIRQLREVIELPLMNPELFVRVGI 582
+GG+ EQ + L +VI P P+LF VG+
Sbjct: 4 VGGMFEQKKLLEQVIIWPRKYPQLFESVGV 33
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/29 (65%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLH-PKGCLLYGPPGTGKTLLARA 649
LFESV + KG LL+GP G GKTLLA A
Sbjct: 753 LFESVGVPVSKGILLHGPSGCGKTLLANA 781
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 481 TYSAIGGLQEQIRQLREVIELPLMNPELFVRVGI 582
T +GG+ EQ + L +VI P P+LF VG+
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGV 759
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/29 (65%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 566 LFESVSLH-PKGCLLYGPPGTGKTLLARA 649
LFESV + KG LL+GP G GKTLLA A
Sbjct: 753 LFESVGVPVSKGILLHGPSGCGKTLLANA 781
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 481 TYSAIGGLQEQIRQLREVIELPLMNPELFVRVGI 582
T +GG+ EQ + L +VI P P+LF VG+
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGV 759
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 566 LFESVSLHPKGCLLYGPPGTGKTLLARA 649
LF S +L G +LYG PG GKTL+A+A
Sbjct: 485 LFGSRALKRSGIILYGSPGCGKTLIAKA 512
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 566 LFESVSLHPKGCLLYGPPGTGKTLLARA 649
LF S +L G +LYG PG GKTL+A+A
Sbjct: 485 LFGSRALKRSGIILYGSPGCGKTLIAKA 512
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 566 LFESVSLHPKGCLLYGPPGTGKTLLARA 649
LF S +L G +LYG PG GKTL+A+A
Sbjct: 485 LFGSRALKRSGIILYGSPGCGKTLIAKA 512
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 593 KGCLLYGPPGTGKTLLARA 649
K +L GPPGTGKTL+ARA
Sbjct: 227 KAMVLAGPPGTGKTLIARA 245
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 593 KGCLLYGPPGTGKTLLARA 649
K +L GPPGTGKTL+ARA
Sbjct: 227 KAMVLAGPPGTGKTLIARA 245
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 593 KGCLLYGPPGTGKTLLARA 649
K +L GPPGTGKTL+ARA
Sbjct: 227 KAMVLAGPPGTGKTLIARA 245
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 593 KGCLLYGPPGTGKTLLARA 649
+G LL+GPPGTGK+ +A+A
Sbjct: 152 QGILLFGPPGTGKSYIAKA 170
>U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical
protein W03B1.2 protein.
Length = 814
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 181 DQLKDLTKQYDKSENDLKALQSVGQIVGEVL-KQLTEEK 294
++LKDL YDK +D +AL+ +G+ + + L K++ EE+
Sbjct: 711 EKLKDLVNNYDKDVDDEEALKKLGKEIKKFLAKEIGEER 749
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 31.5 bits (68), Expect = 0.54
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 593 KGCLLYGPPGTGKTLLARA 649
+ + YGPPGTGKTL A++
Sbjct: 343 RNVMFYGPPGTGKTLFAKS 361
>AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion
transporter SULP-1b protein.
Length = 729
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 390 KGNSCSSFKLVFVKLPTTANNVARAISSFY 301
+G+ C S V + LP T +NV R + FY
Sbjct: 207 RGHDCKSTSAVGILLPNTTDNVKRVLQCFY 236
>AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion
transporter SULP-1a protein.
Length = 729
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 390 KGNSCSSFKLVFVKLPTTANNVARAISSFY 301
+G+ C S V + LP T +NV R + FY
Sbjct: 207 RGHDCKSTSAVGILLPNTTDNVKRVLQCFY 236
>AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate permease
family protein 1 protein.
Length = 729
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 390 KGNSCSSFKLVFVKLPTTANNVARAISSFY 301
+G+ C S V + LP T +NV R + FY
Sbjct: 207 RGHDCKSTSAVGILLPNTTDNVKRVLQCFY 236
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 127 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQS-VGQIVGEVLKQLTEEKFIV 303
+K L+E +ESRLKE Q +L +K + KAL+ + ++ ++ K +V
Sbjct: 977 QKLLLEKNSIESRLKELEAQGLELEDSGNKLSKEKKALEERCEDLSSRLIDEVERSKQLV 1036
Query: 304 KA 309
KA
Sbjct: 1037 KA 1038
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 127 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQS-VGQIVGEVLKQLTEEKFIV 303
+K L+E +ESRLKE Q +L +K + KAL+ + ++ ++ K +V
Sbjct: 977 QKLLLEKNSIESRLKELEAQGLELEDSGNKLSKEKKALEERCEDLSSRLIDEVERSKQLV 1036
Query: 304 KA 309
KA
Sbjct: 1037 KA 1038
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 127 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQS-VGQIVGEVLKQLTEEKFIV 303
+K L+E +ESRLKE Q +L +K + KAL+ + ++ ++ K +V
Sbjct: 977 QKLLLEKNSIESRLKELEAQGLELEDSGNKLSKEKKALEERCEDLSSRLIDEVERSKQLV 1036
Query: 304 KA 309
KA
Sbjct: 1037 KA 1038
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 88 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL-QSVGQIVG 264
D+E E+ Q +K L++ V+ RL+ ++L +L YDK + + L + V +
Sbjct: 953 DLEEQLEQEEQARQKLLLDKTNVDQRLRNLEERLVELQDAYDKLLKEKRLLEEKVEGLTT 1012
Query: 265 EVLKQLTEEKFIVKA 309
++L K VKA
Sbjct: 1013 QLLDHEERAKHGVKA 1027
>U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical
protein C17G10.2 protein.
Length = 419
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 58 KLFTMPASTSDMEPLR--EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL 231
K+F TSD L EK F D + L K VE LKE RD+ K ++ ++E+
Sbjct: 195 KIFAFTKETSDTPDLTDDEKKFIDQLETLRV-KSVELSLKEERDKRKSRAEERKETESKK 253
Query: 232 KALQSV 249
+ L ++
Sbjct: 254 QLLDAL 259
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/88 (30%), Positives = 41/88 (46%)
Frame = +1
Query: 109 KAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTE 288
KA +Y K L + +E E +K+L K + EN K LQSV ++VGE+ +
Sbjct: 2989 KANLEYSKILEKIAPLEG---EKNKLVKNLKKAEKQMENLSKGLQSVDEVVGEL-----K 3040
Query: 289 EKFIVKATNGPRYVVGCRRQLDKNKLKG 372
KF V + V R+ D ++ G
Sbjct: 3041 RKFEVLMKEATQIKVDLDREQDTIRIAG 3068
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 142 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 243
E ++E R++E D+L + + DK+END+ L+
Sbjct: 1096 EKDDLERRIRELEDELSQIGRGNDKTENDITELK 1129
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 142 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 243
E ++E R++E D+L + + DK+END+ L+
Sbjct: 1169 EKDDLERRIRELEDELSQIGRGNDKTENDITELK 1202
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 142 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 243
E ++E R++E D+L + + DK+END+ L+
Sbjct: 1169 EKDDLERRIRELEDELSQIGRGNDKTENDITELK 1202
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = +1
Query: 94 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVL 273
E +EK ++ +KL+ ++ +KE +++K ++ K E LKA + ++ E +
Sbjct: 885 EKCKEKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVEKEKV 944
Query: 274 KQLTEEKFIVKATN 315
K E+ + K N
Sbjct: 945 KAEEEKVKVEKERN 958
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/87 (22%), Positives = 46/87 (52%)
Frame = +1
Query: 127 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVK 306
RKK E +E+E+++KE R + + ++ ++ E + ++ + + E L++ EE+ +
Sbjct: 142 RKKEQEKREIENKIKEARKKREQEARRLEEVEKLKEQKKAEKRKMKEALEKEEEEESFDE 201
Query: 307 ATNGPRYVVGCRRQLDKNKLKGGTRVA 387
+ R +++K+ KGG+ A
Sbjct: 202 DEVSEK-----RAKIEKSTEKGGSEKA 223
>U29244-11|AAC71092.1| 201|Caenorhabditis elegans Hypothetical
protein ZK1248.11 protein.
Length = 201
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 85 SDMEPLREKAFQD-YRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 243
SD P EKA ++ Y K HK V+ + +D +K + + EN+++ +Q
Sbjct: 77 SDEVP-NEKALEELYEKAKKTHKNVKGERQYFKDIIKSIRDESKNDENEMEVMQ 129
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 557 QSCLFESVSLHPKGCLLYGPPGTGKTLLA 643
Q CL + L + C+L P G GKTL+A
Sbjct: 173 QECLSDKRLLDGENCILSLPTGAGKTLIA 201
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 121 DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIV 261
D + E KE E L E + + +D + K +N+L G+I+
Sbjct: 776 DMAPVIQERKEAEHTLAEIQKETRDFASKSQKLQNELSKYDDAGEIL 822
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/77 (23%), Positives = 40/77 (51%)
Frame = +1
Query: 100 LREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQ 279
L+++ ++Y K EVE +++E RD+++ + ++ DL A + E +++
Sbjct: 290 LQDETKKEYAKNRAARTEVEKKIQEFRDEVEVQDAEIAEAREDLDAKKRKVLEFEEKIRE 349
Query: 280 LTEEKFIVKATNGPRYV 330
E+ I K T+ +Y+
Sbjct: 350 C--EQSIRKKTSEKKYM 364
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 79 STSDMEPLREKAFQDYRKKLMEHKEVE-SRLKEGRDQLKDLTKQYDKSENDLKALQSVGQ 255
++ D + REK + +++ +++ K+ +RLK + + ++K+Y++ E K + Q
Sbjct: 300 ASEDSDDAREK--RAFKQMMLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQ 357
Query: 256 IVGEVLKQLTEE 291
G+ LK E+
Sbjct: 358 KEGKRLKLFLED 369
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 79 STSDMEPLREKAFQDYRKKLMEHKEVE-SRLKEGRDQLKDLTKQYDKSENDLKALQSVGQ 255
++ D + REK + +++ +++ K+ +RLK + + ++K+Y++ E K + Q
Sbjct: 300 ASEDSDDAREK--RAFKQMMLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQ 357
Query: 256 IVGEVLKQLTEE 291
G+ LK E+
Sbjct: 358 KEGKRLKLFLED 369
>Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical
protein W04D2.6b protein.
Length = 547
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 79 STSDMEPLREKAFQDYRKKLMEHKEVE-SRLKEGRDQLKDLTKQYDKSENDLKALQSVGQ 255
++ D + REK + +++ +++ K+ +RLK + + ++K+Y++ E K + Q
Sbjct: 142 ASEDSDDAREK--RAFKQMMLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQ 199
Query: 256 IVGEVLKQLTEE 291
G+ LK E+
Sbjct: 200 KEGKRLKLFLED 211
>Z75527-4|CAA99779.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.4 protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 115 FQDYRKKLMEHKEVESRLKEGRDQL-KDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEE 291
F+ KK+ HKE SRL+E ++ KD ++ Y+ E +K + + + L++ EE
Sbjct: 251 FESQLKKIEFHKEEVSRLQEDAEERGKDKSQVYENLELSIKH-EKLNR-KARKLEKYIEE 308
Query: 292 KFIV 303
K I+
Sbjct: 309 KIII 312
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +1
Query: 127 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSV 249
R+K +E + +E+ RD +KDL KQ+++ ++ +K L ++
Sbjct: 781 REKSLEGR-LETHSMTKRDNMKDLKKQFEQKQDAVKELNAL 820
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 121 DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIV 261
D + E KE E L E + + +D + K +N+L G+I+
Sbjct: 776 DMAPVIQERKEAEHTLAEIQKETRDFASKSQKLQNELSKYDDAGEIL 822
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/77 (23%), Positives = 40/77 (51%)
Frame = +1
Query: 100 LREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQ 279
L+++ ++Y K EVE +++E RD+++ + ++ DL A + E +++
Sbjct: 290 LQDETKKEYAKNRAARTEVEKKIQEFRDEVEVQDAEIAEAREDLDAKKRKVLEFEEKIRE 349
Query: 280 LTEEKFIVKATNGPRYV 330
E+ I K T+ +Y+
Sbjct: 350 C--EQSIRKKTSEKKYM 364
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 602 LLYGPPGTGKTLLARA 649
L YGPPGTGKT A A
Sbjct: 52 LFYGPPGTGKTSAALA 67
>DQ178236-1|ABA18178.1| 316|Caenorhabditis elegans putative low
density lipoproteinreceptor associated protein (37.4 kD)
protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 115 FQDYRKKLMEHKEVESRLKEGRDQL-KDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEE 291
F+ KK+ HKE SRL+E ++ KD ++ Y+ E +K + + + L++ EE
Sbjct: 251 FESQLKKIEFHKEEVSRLQEDAEERGKDKSQVYENLELSIKH-EKLNR-KARKLEKYIEE 308
Query: 292 KFIV 303
K I+
Sbjct: 309 KIII 312
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 121 DYRKKLMEHKE-VESRLKEGRDQLKDLTKQYDKSENDLKALQS 246
+++ K+ E KE +E +KE DQ+ +L +Q++ + LQS
Sbjct: 998 EWKAKIEEEKEQLEQHVKELEDQVAELMEQHETHFRQAQLLQS 1040
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 593 KGCLLYGPPGTGKT 634
+G L YGPPGTGK+
Sbjct: 198 RGYLFYGPPGTGKS 211
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 593 KGCLLYGPPGTGKT 634
+G L YGPPGTGK+
Sbjct: 244 RGYLFYGPPGTGKS 257
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +1
Query: 88 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 240
D E RE+ DY K+ + KE + ++ + + K++ K+++K + + +
Sbjct: 194 DYERDRERRKDDYEKEKSKRKESDRDNEKEKQREKEVEKEHEKDRKEKRKI 244
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +1
Query: 88 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 240
D E RE+ DY K+ + KE + ++ + + K++ K+++K + + +
Sbjct: 959 DYERDRERRKDDYEKEKSKRKESDRDNEKEKQREKEVEKEHEKDRKEKRKI 1009
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 106 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 225
E+A Q Y +K +KE E + +E + +LKD+ K+ + ++N
Sbjct: 252 ERAQQHYMQK---YKESEQKRREEKRKLKDMEKECNDAKN 288
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 106 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 225
E+A Q Y +K +KE E + +E + +LKD+ K+ + ++N
Sbjct: 187 ERAQQHYMQK---YKESEQKRREEKRKLKDMEKECNDAKN 223
>AF016417-1|AAK68335.1| 241|Caenorhabditis elegans Hypothetical
protein F17A9.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +1
Query: 154 VESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVV 333
V + LK +DQ+KD+ + +N+ A +S Q +++ E++ +AT+ R +
Sbjct: 103 VRNELKRKKDQVKDVAYWERRRKNNDAAKRSRDQ------RRMKEDEMAHRATSLERENM 156
Query: 334 GCRRQLDKNKLKGGTRVALDMTTLTIMRHLP 426
R +LD+ + + AL +TT T +P
Sbjct: 157 LLRVELDQLRAETDKLRALILTTPTTSISIP 187
>Z83125-2|CAB05621.2| 391|Caenorhabditis elegans Hypothetical
protein T15D6.3 protein.
Length = 391
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -3
Query: 633 VFPVPGGPYSKHPL--GWSDTDSNKQLWVH*GQFNHLSQLSNLFLKTSYGGIGHITRILM 460
+F VPG PL GW + S QLWV N++ S +F GIG + ++
Sbjct: 299 LFNVPGSFNFNDPLTNGWGNYVSRHQLWVESECHNYMKDRSCVF------GIGDVPNLMK 352
Query: 459 THVV 448
+ +
Sbjct: 353 SRAL 356
>U64837-9|AAB04843.2| 309|Caenorhabditis elegans Hypothetical
protein T27E4.1 protein.
Length = 309
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -3
Query: 330 NVARAISSFYNKFFFCELF-QDFSNYL 253
NV RA ++ YN+FF C++ ++F N L
Sbjct: 99 NVVRASTTIYNEFFTCKVAPREFKNTL 125
>U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical
protein C35D10.7b protein.
Length = 486
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 KKLMEHKEVESRLKEGRDQ-LKDLTKQYDKSE 222
KKL++HK E L +GR+ +K L + K E
Sbjct: 107 KKLLQHKNAEKLLNDGREVFIKTLEEHNQKKE 138
>U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical
protein C35D10.7a protein.
Length = 537
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 KKLMEHKEVESRLKEGRDQ-LKDLTKQYDKSE 222
KKL++HK E L +GR+ +K L + K E
Sbjct: 158 KKLLQHKNAEKLLNDGREVFIKTLEEHNQKKE 189
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2
Query: 602 LLYGPPGTGKT 634
L YGPPGTGKT
Sbjct: 66 LFYGPPGTGKT 76
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 91 MEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 270
+E EKA Q + + V SRLKE + + + K + ++ L+ + E
Sbjct: 179 LEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDRLEDELLLEKER 238
Query: 271 LKQLTEE 291
++ LTEE
Sbjct: 239 VRNLTEE 245
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 91 MEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 270
+E EKA Q + + V SRLKE + + + K + ++ L+ + E
Sbjct: 179 LEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDRLEDELLLEKER 238
Query: 271 LKQLTEE 291
++ LTEE
Sbjct: 239 VRNLTEE 245
>AY037796-1|AAK94761.1| 283|Caenorhabditis elegans GLY-17 protein.
Length = 283
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -3
Query: 633 VFPVPGGPYSKHPL--GWSDTDSNKQLWVH*GQFNHLSQLSNLFLKTSYGGIGHITRILM 460
+F VPG PL GW + S QLWV N++ S +F GIG + ++
Sbjct: 191 LFNVPGSFNFNDPLTNGWGNYVSRHQLWVESECHNYMKDRSCVF------GIGDVPNLMK 244
Query: 459 THVV 448
+ +
Sbjct: 245 SRAL 248
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 91 MEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 270
+E EKA Q + + V SRLKE + + + K + ++ L+ + E
Sbjct: 179 LEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDRLEDELLLEKER 238
Query: 271 LKQLTEE 291
++ LTEE
Sbjct: 239 VRNLTEE 245
>AC024881-5|AAK71415.1| 668|Caenorhabditis elegans Na/ca exchangers
protein 10 protein.
Length = 668
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -3
Query: 264 SNYLSNTL*GFQVIFTLVILFG-QIF*LVTTFFES*LDFLMLHEFLSVILEGLFS*RLHV 88
+ Y+S+ L GF + FT+ L G QI ++T + + FL + F S+I +F R V
Sbjct: 581 TTYISDLLIGFGLPFTIACLQGKQIDLIITPVYRLLMLFLAISLFTSLI--AIFVQRFKV 638
Query: 87 R 85
R
Sbjct: 639 R 639
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,748,513
Number of Sequences: 27780
Number of extensions: 298124
Number of successful extensions: 1204
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -