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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1322
         (505 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5...   168   8e-42
BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5 p...   168   8e-42
BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein.      168   8e-42
BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein.      168   8e-42
AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5 p...   168   8e-42
AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5 p...   168   8e-42
U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein.    168   1e-41
BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein pr...   116   4e-26
BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6 p...   116   4e-26
AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6 p...   116   4e-26
AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein...   116   4e-26
AL356580-4|CAI13759.1|  126|Homo sapiens RAN binding protein 5 p...   100   3e-21
AL356580-3|CAI13758.1|   76|Homo sapiens RAN binding protein 5 p...    63   6e-10

>Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5
           protein.
          Length = 1097

 Score =  168 bits (409), Expect = 8e-42
 Identities = 77/167 (46%), Positives = 111/167 (66%)
 Frame = +2

Query: 2   LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
           LS DN +R QAE+ Y NIP ++K+  L+ +I+N   AE+ RQ AAVLLRRL S+      
Sbjct: 19  LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78

Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
                  QT ++ +LL+ +QM+    +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F 
Sbjct: 79  PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138

Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
             S+Q+  ++EA + +F + PG+FGN+    LDVIK ML+  +Q  E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185


>BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5
           protein.
          Length = 1115

 Score =  168 bits (409), Expect = 8e-42
 Identities = 77/167 (46%), Positives = 111/167 (66%)
 Frame = +2

Query: 2   LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
           LS DN +R QAE+ Y NIP ++K+  L+ +I+N   AE+ RQ AAVLLRRL S+      
Sbjct: 37  LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 96

Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
                  QT ++ +LL+ +QM+    +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F 
Sbjct: 97  PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 156

Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
             S+Q+  ++EA + +F + PG+FGN+    LDVIK ML+  +Q  E
Sbjct: 157 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 203


>BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein.
          Length = 1097

 Score =  168 bits (409), Expect = 8e-42
 Identities = 77/167 (46%), Positives = 111/167 (66%)
 Frame = +2

Query: 2   LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
           LS DN +R QAE+ Y NIP ++K+  L+ +I+N   AE+ RQ AAVLLRRL S+      
Sbjct: 19  LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78

Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
                  QT ++ +LL+ +QM+    +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F 
Sbjct: 79  PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138

Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
             S+Q+  ++EA + +F + PG+FGN+    LDVIK ML+  +Q  E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185


>BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein.
          Length = 1097

 Score =  168 bits (409), Expect = 8e-42
 Identities = 77/167 (46%), Positives = 111/167 (66%)
 Frame = +2

Query: 2   LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
           LS DN +R QAE+ Y NIP ++K+  L+ +I+N   AE+ RQ AAVLLRRL S+      
Sbjct: 19  LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78

Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
                  QT ++ +LL+ +QM+    +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F 
Sbjct: 79  PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138

Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
             S+Q+  ++EA + +F + PG+FGN+    LDVIK ML+  +Q  E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185


>AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5
           protein.
          Length = 1097

 Score =  168 bits (409), Expect = 8e-42
 Identities = 77/167 (46%), Positives = 111/167 (66%)
 Frame = +2

Query: 2   LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
           LS DN +R QAE+ Y NIP ++K+  L+ +I+N   AE+ RQ AAVLLRRL S+      
Sbjct: 19  LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78

Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
                  QT ++ +LL+ +QM+    +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F 
Sbjct: 79  PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138

Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
             S+Q+  ++EA + +F + PG+FGN+    LDVIK ML+  +Q  E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185


>AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5
           protein.
          Length = 1097

 Score =  168 bits (409), Expect = 8e-42
 Identities = 77/167 (46%), Positives = 111/167 (66%)
 Frame = +2

Query: 2   LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
           LS DN +R QAE+ Y NIP ++K+  L+ +I+N   AE+ RQ AAVLLRRL S+      
Sbjct: 19  LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78

Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
                  QT ++ +LL+ +QM+    +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F 
Sbjct: 79  PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138

Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
             S+Q+  ++EA + +F + PG+FGN+    LDVIK ML+  +Q  E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185


>U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein.
          Length = 1097

 Score =  168 bits (408), Expect = 1e-41
 Identities = 77/167 (46%), Positives = 111/167 (66%)
 Frame = +2

Query: 2   LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
           LS DN +R QAE+ Y NIP ++K+  L+ +I+N   AE+ RQ AAVLLRRL S+      
Sbjct: 19  LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78

Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
                  QT ++ +LL+ +QM+    +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F 
Sbjct: 79  PALPSDVQTAIKSELLMIIQMETQXSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138

Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
             S+Q+  ++EA + +F + PG+FGN+    LDVIK ML+  +Q  E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185


>BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein
           protein.
          Length = 1109

 Score =  116 bits (280), Expect = 4e-26
 Identities = 56/161 (34%), Positives = 93/161 (57%)
 Frame = +2

Query: 20  IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199
           +R QAE+ Y NIP   K   L+++++N     +VRQ AA LLRRL S+            
Sbjct: 37  VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 96

Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379
            Q  ++ +L+L ++++    +R+K+CD+ + LARN ID+DG N WPE L+F+     +++
Sbjct: 97  VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 156

Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
             + E  + +F   PG+FG +   +LD+IK +L   +Q  E
Sbjct: 157 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 197


>BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6
           protein.
          Length = 1105

 Score =  116 bits (280), Expect = 4e-26
 Identities = 56/161 (34%), Positives = 93/161 (57%)
 Frame = +2

Query: 20  IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199
           +R QAE+ Y NIP   K   L+++++N     +VRQ AA LLRRL S+            
Sbjct: 33  VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 92

Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379
            Q  ++ +L+L ++++    +R+K+CD+ + LARN ID+DG N WPE L+F+     +++
Sbjct: 93  VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 152

Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
             + E  + +F   PG+FG +   +LD+IK +L   +Q  E
Sbjct: 153 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 193


>AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6
           protein.
          Length = 1105

 Score =  116 bits (280), Expect = 4e-26
 Identities = 56/161 (34%), Positives = 93/161 (57%)
 Frame = +2

Query: 20  IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199
           +R QAE+ Y NIP   K   L+++++N     +VRQ AA LLRRL S+            
Sbjct: 33  VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 92

Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379
            Q  ++ +L+L ++++    +R+K+CD+ + LARN ID+DG N WPE L+F+     +++
Sbjct: 93  VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 152

Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
             + E  + +F   PG+FG +   +LD+IK +L   +Q  E
Sbjct: 153 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 193


>AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein
           protein.
          Length = 1105

 Score =  116 bits (280), Expect = 4e-26
 Identities = 56/161 (34%), Positives = 93/161 (57%)
 Frame = +2

Query: 20  IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199
           +R QAE+ Y NIP   K   L+++++N     +VRQ AA LLRRL S+            
Sbjct: 33  VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 92

Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379
            Q  ++ +L+L ++++    +R+K+CD+ + LARN ID+DG N WPE L+F+     +++
Sbjct: 93  VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 152

Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
             + E  + +F   PG+FG +   +LD+IK +L   +Q  E
Sbjct: 153 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 193


>AL356580-4|CAI13759.1|  126|Homo sapiens RAN binding protein 5
           protein.
          Length = 126

 Score =  100 bits (239), Expect = 3e-21
 Identities = 45/99 (45%), Positives = 66/99 (66%)
 Frame = +2

Query: 116 DVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSEL 295
           + RQ AAVLLRRL S+             QT ++ +LL+ +QM+    +R+KVCD+ +EL
Sbjct: 28  EARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAEL 87

Query: 296 ARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMF 412
           ARN ID+DGNNQWPE L+F+F   S+Q+  ++EA + +F
Sbjct: 88  ARNLIDEDGNNQWPEGLKFLFDSVSSQNVGLREAALHIF 126


>AL356580-3|CAI13758.1|   76|Homo sapiens RAN binding protein 5
           protein.
          Length = 76

 Score = 62.9 bits (146), Expect = 6e-10
 Identities = 29/54 (53%), Positives = 39/54 (72%)
 Frame = +2

Query: 2   LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSA 163
           LS DN +R QAE+ Y NIP ++K+  L+ +I+N   AE+ RQ AAVLLRRL S+
Sbjct: 19  LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSS 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,681,685
Number of Sequences: 237096
Number of extensions: 1500700
Number of successful extensions: 6825
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6825
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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