Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1322
(505 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5... 168 8e-42
BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5 p... 168 8e-42
BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein. 168 8e-42
BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein. 168 8e-42
AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5 p... 168 8e-42
AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5 p... 168 8e-42
U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein. 168 1e-41
BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein pr... 116 4e-26
BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6 p... 116 4e-26
AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6 p... 116 4e-26
AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein... 116 4e-26
AL356580-4|CAI13759.1| 126|Homo sapiens RAN binding protein 5 p... 100 3e-21
AL356580-3|CAI13758.1| 76|Homo sapiens RAN binding protein 5 p... 63 6e-10
>Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5
protein.
Length = 1097
Score = 168 bits (409), Expect = 8e-42
Identities = 77/167 (46%), Positives = 111/167 (66%)
Frame = +2
Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+
Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78
Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F
Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138
Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185
>BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5
protein.
Length = 1115
Score = 168 bits (409), Expect = 8e-42
Identities = 77/167 (46%), Positives = 111/167 (66%)
Frame = +2
Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+
Sbjct: 37 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 96
Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F
Sbjct: 97 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 156
Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E
Sbjct: 157 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 203
>BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 168 bits (409), Expect = 8e-42
Identities = 77/167 (46%), Positives = 111/167 (66%)
Frame = +2
Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+
Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78
Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F
Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138
Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185
>BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 168 bits (409), Expect = 8e-42
Identities = 77/167 (46%), Positives = 111/167 (66%)
Frame = +2
Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+
Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78
Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F
Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138
Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185
>AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 168 bits (409), Expect = 8e-42
Identities = 77/167 (46%), Positives = 111/167 (66%)
Frame = +2
Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+
Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78
Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F
Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138
Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185
>AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 168 bits (409), Expect = 8e-42
Identities = 77/167 (46%), Positives = 111/167 (66%)
Frame = +2
Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+
Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78
Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F
Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138
Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185
>U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein.
Length = 1097
Score = 168 bits (408), Expect = 1e-41
Identities = 77/167 (46%), Positives = 111/167 (66%)
Frame = +2
Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181
LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+
Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78
Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361
QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F
Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQXSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138
Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E
Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185
>BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein
protein.
Length = 1109
Score = 116 bits (280), Expect = 4e-26
Identities = 56/161 (34%), Positives = 93/161 (57%)
Frame = +2
Query: 20 IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199
+R QAE+ Y NIP K L+++++N +VRQ AA LLRRL S+
Sbjct: 37 VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 96
Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379
Q ++ +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+ +++
Sbjct: 97 VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 156
Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
+ E + +F PG+FG + +LD+IK +L +Q E
Sbjct: 157 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 197
>BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 116 bits (280), Expect = 4e-26
Identities = 56/161 (34%), Positives = 93/161 (57%)
Frame = +2
Query: 20 IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199
+R QAE+ Y NIP K L+++++N +VRQ AA LLRRL S+
Sbjct: 33 VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 92
Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379
Q ++ +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+ +++
Sbjct: 93 VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 152
Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
+ E + +F PG+FG + +LD+IK +L +Q E
Sbjct: 153 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 193
>AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 116 bits (280), Expect = 4e-26
Identities = 56/161 (34%), Positives = 93/161 (57%)
Frame = +2
Query: 20 IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199
+R QAE+ Y NIP K L+++++N +VRQ AA LLRRL S+
Sbjct: 33 VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 92
Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379
Q ++ +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+ +++
Sbjct: 93 VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 152
Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
+ E + +F PG+FG + +LD+IK +L +Q E
Sbjct: 153 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 193
>AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein
protein.
Length = 1105
Score = 116 bits (280), Expect = 4e-26
Identities = 56/161 (34%), Positives = 93/161 (57%)
Frame = +2
Query: 20 IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199
+R QAE+ Y NIP K L+++++N +VRQ AA LLRRL S+
Sbjct: 33 VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 92
Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379
Q ++ +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+ +++
Sbjct: 93 VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 152
Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502
+ E + +F PG+FG + +LD+IK +L +Q E
Sbjct: 153 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 193
>AL356580-4|CAI13759.1| 126|Homo sapiens RAN binding protein 5
protein.
Length = 126
Score = 100 bits (239), Expect = 3e-21
Identities = 45/99 (45%), Positives = 66/99 (66%)
Frame = +2
Query: 116 DVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSEL 295
+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+KVCD+ +EL
Sbjct: 28 EARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAEL 87
Query: 296 ARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMF 412
ARN ID+DGNNQWPE L+F+F S+Q+ ++EA + +F
Sbjct: 88 ARNLIDEDGNNQWPEGLKFLFDSVSSQNVGLREAALHIF 126
>AL356580-3|CAI13758.1| 76|Homo sapiens RAN binding protein 5
protein.
Length = 76
Score = 62.9 bits (146), Expect = 6e-10
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +2
Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSA 163
LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+
Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSS 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,681,685
Number of Sequences: 237096
Number of extensions: 1500700
Number of successful extensions: 6825
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6825
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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