BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1322 (505 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5... 168 8e-42 BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5 p... 168 8e-42 BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein. 168 8e-42 BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein. 168 8e-42 AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5 p... 168 8e-42 AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5 p... 168 8e-42 U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein. 168 1e-41 BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein pr... 116 4e-26 BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6 p... 116 4e-26 AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6 p... 116 4e-26 AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein... 116 4e-26 AL356580-4|CAI13759.1| 126|Homo sapiens RAN binding protein 5 p... 100 3e-21 AL356580-3|CAI13758.1| 76|Homo sapiens RAN binding protein 5 p... 63 6e-10 >Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5 protein. Length = 1097 Score = 168 bits (409), Expect = 8e-42 Identities = 77/167 (46%), Positives = 111/167 (66%) Frame = +2 Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181 LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+ Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78 Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361 QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138 Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502 S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185 >BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5 protein. Length = 1115 Score = 168 bits (409), Expect = 8e-42 Identities = 77/167 (46%), Positives = 111/167 (66%) Frame = +2 Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181 LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+ Sbjct: 37 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 96 Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361 QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F Sbjct: 97 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 156 Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502 S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E Sbjct: 157 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 203 >BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein. Length = 1097 Score = 168 bits (409), Expect = 8e-42 Identities = 77/167 (46%), Positives = 111/167 (66%) Frame = +2 Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181 LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+ Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78 Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361 QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138 Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502 S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185 >BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein. Length = 1097 Score = 168 bits (409), Expect = 8e-42 Identities = 77/167 (46%), Positives = 111/167 (66%) Frame = +2 Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181 LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+ Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78 Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361 QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138 Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502 S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185 >AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5 protein. Length = 1097 Score = 168 bits (409), Expect = 8e-42 Identities = 77/167 (46%), Positives = 111/167 (66%) Frame = +2 Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181 LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+ Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78 Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361 QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138 Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502 S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185 >AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5 protein. Length = 1097 Score = 168 bits (409), Expect = 8e-42 Identities = 77/167 (46%), Positives = 111/167 (66%) Frame = +2 Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181 LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+ Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78 Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361 QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138 Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502 S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185 >U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein. Length = 1097 Score = 168 bits (408), Expect = 1e-41 Identities = 77/167 (46%), Positives = 111/167 (66%) Frame = +2 Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXX 181 LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+ Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVY 78 Query: 182 XXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 361 QT ++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+F Sbjct: 79 PALPSDVQTAIKSELLMIIQMETQXSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFD 138 Query: 362 CASAQDPNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502 S+Q+ ++EA + +F + PG+FGN+ LDVIK ML+ +Q E Sbjct: 139 SVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQE 185 >BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein protein. Length = 1109 Score = 116 bits (280), Expect = 4e-26 Identities = 56/161 (34%), Positives = 93/161 (57%) Frame = +2 Query: 20 IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199 +R QAE+ Y NIP K L+++++N +VRQ AA LLRRL S+ Sbjct: 37 VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 96 Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379 Q ++ +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+ +++ Sbjct: 97 VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 156 Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502 + E + +F PG+FG + +LD+IK +L +Q E Sbjct: 157 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 197 >BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6 protein. Length = 1105 Score = 116 bits (280), Expect = 4e-26 Identities = 56/161 (34%), Positives = 93/161 (57%) Frame = +2 Query: 20 IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199 +R QAE+ Y NIP K L+++++N +VRQ AA LLRRL S+ Sbjct: 33 VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 92 Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379 Q ++ +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+ +++ Sbjct: 93 VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 152 Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502 + E + +F PG+FG + +LD+IK +L +Q E Sbjct: 153 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 193 >AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6 protein. Length = 1105 Score = 116 bits (280), Expect = 4e-26 Identities = 56/161 (34%), Positives = 93/161 (57%) Frame = +2 Query: 20 IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199 +R QAE+ Y NIP K L+++++N +VRQ AA LLRRL S+ Sbjct: 33 VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 92 Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379 Q ++ +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+ +++ Sbjct: 93 VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 152 Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502 + E + +F PG+FG + +LD+IK +L +Q E Sbjct: 153 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 193 >AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein protein. Length = 1105 Score = 116 bits (280), Expect = 4e-26 Identities = 56/161 (34%), Positives = 93/161 (57%) Frame = +2 Query: 20 IRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXX 199 +R QAE+ Y NIP K L+++++N +VRQ AA LLRRL S+ Sbjct: 33 VRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPAD 92 Query: 200 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQD 379 Q ++ +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+ +++ Sbjct: 93 VQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKN 152 Query: 380 PNIKEAGIRMFTSVPGVFGNRHTENLDVIKGMLISALQPNE 502 + E + +F PG+FG + +LD+IK +L +Q E Sbjct: 153 VVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQE 193 >AL356580-4|CAI13759.1| 126|Homo sapiens RAN binding protein 5 protein. Length = 126 Score = 100 bits (239), Expect = 3e-21 Identities = 45/99 (45%), Positives = 66/99 (66%) Frame = +2 Query: 116 DVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSEL 295 + RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+KVCD+ +EL Sbjct: 28 EARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAEL 87 Query: 296 ARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMF 412 ARN ID+DGNNQWPE L+F+F S+Q+ ++EA + +F Sbjct: 88 ARNLIDEDGNNQWPEGLKFLFDSVSSQNVGLREAALHIF 126 >AL356580-3|CAI13758.1| 76|Homo sapiens RAN binding protein 5 protein. Length = 76 Score = 62.9 bits (146), Expect = 6e-10 Identities = 29/54 (53%), Positives = 39/54 (72%) Frame = +2 Query: 2 LSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSA 163 LS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL S+ Sbjct: 19 LSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSS 72 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 75,681,685 Number of Sequences: 237096 Number of extensions: 1500700 Number of successful extensions: 6825 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 6707 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6825 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4649883964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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