Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1318
         (300 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095526-1|AAM12257.1|  435|Drosophila melanogaster RE15519p pro...    28   2.5  
AE014298-746|AAF46037.2|  435|Drosophila melanogaster CG16752-PA...    28   2.5  
AY089502-1|AAL90240.1|  341|Drosophila melanogaster GH12548p pro...    27   3.3  
AE014134-1176|AAF52443.1|  341|Drosophila melanogaster CG11236-P...    27   3.3  
AY061097-1|AAL28645.1|  597|Drosophila melanogaster LD08814p pro...    27   4.4  
AY060323-1|AAL25362.1|  241|Drosophila melanogaster GH20809p pro...    27   4.4  
AE014297-4430|AAF56931.1|  597|Drosophila melanogaster CG1972-PA...    27   4.4  

>AY095526-1|AAM12257.1|  435|Drosophila melanogaster RE15519p
           protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 16  THYYLQKVWRQHMSNYYSYVAIGVLLFKKIKQPQISLKFLLKTRAEPE 159
           T YYL +V   H+      V + +LLF  ++Q Q   K L +   + E
Sbjct: 270 TSYYLFRVLFVHLLPCIILVTLNILLFAAMRQAQERRKLLFRENRKKE 317


>AE014298-746|AAF46037.2|  435|Drosophila melanogaster CG16752-PA
           protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 16  THYYLQKVWRQHMSNYYSYVAIGVLLFKKIKQPQISLKFLLKTRAEPE 159
           T YYL +V   H+      V + +LLF  ++Q Q   K L +   + E
Sbjct: 270 TSYYLFRVLFVHLLPCIILVTLNILLFAAMRQAQERRKLLFRENRKKE 317


>AY089502-1|AAL90240.1|  341|Drosophila melanogaster GH12548p
           protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 207 IKVCEGHHFITYTSGPLRLRSGL*QKFQR 121
           +K   G  F+TYTS P++L   L ++F R
Sbjct: 136 VKFTSGLSFVTYTSEPIKLLPYLMKRFTR 164


>AE014134-1176|AAF52443.1|  341|Drosophila melanogaster CG11236-PA
           protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 207 IKVCEGHHFITYTSGPLRLRSGL*QKFQR 121
           +K   G  F+TYTS P++L   L ++F R
Sbjct: 136 VKFTSGLSFVTYTSEPIKLLPYLMKRFTR 164


>AY061097-1|AAL28645.1|  597|Drosophila melanogaster LD08814p
           protein.
          Length = 597

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 274 PDRHPGQEWTHHLRPPLLI 218
           PDRH G  W    RP LLI
Sbjct: 183 PDRHLGAAWIDKCRPDLLI 201


>AY060323-1|AAL25362.1|  241|Drosophila melanogaster GH20809p
           protein.
          Length = 241

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 166 RPAPAPLGSLTKISTIFEVVLFF*IKEHLLRHN 68
           +P+  P+  LT +S +FE  L   I  HL  HN
Sbjct: 47  QPSYRPISLLTCLSKLFEKGLLLRISPHLKTHN 79


>AE014297-4430|AAF56931.1|  597|Drosophila melanogaster CG1972-PA
           protein.
          Length = 597

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 274 PDRHPGQEWTHHLRPPLLI 218
           PDRH G  W    RP LLI
Sbjct: 183 PDRHLGAAWIDKCRPDLLI 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,228,096
Number of Sequences: 53049
Number of extensions: 302504
Number of successful extensions: 701
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)