Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1316
(714 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 31 0.007
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 27 0.20
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 27 0.20
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 27 0.20
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 26 0.26
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 23 1.9
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 23 2.5
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 23 2.5
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 23 3.3
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 23 3.3
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 23 3.3
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 4.3
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 22 5.7
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 31.5 bits (68), Expect = 0.007
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = +2
Query: 467 DSNTNKTCKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTY 646
D+ C+IC K Y PS L H+ T ++ P C CNK S H
Sbjct: 245 DNQKPNVCRICGKSYARPSTLKTHLRTHSGEK------PYRCIDCNKSFSQAANLTAHV- 297
Query: 647 KEHPGRE 667
+ H G +
Sbjct: 298 RTHSGEK 304
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLT 424
YRC +CN F L H+ T
Sbjct: 278 YRCIDCNKSFSQAANLTAHVRT 299
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHV 541
CK+CL + L RH+
Sbjct: 364 CKLCLLRFSQSGNLNRHM 381
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 26.6 bits (56), Expect = 0.20
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHL 418
YRC++C+ +FV LR HL
Sbjct: 38 YRCEHCDRQFVQVANLRRHL 57
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 26.6 bits (56), Expect = 0.20
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 362 RCDNCNVKFVSKGALRVHL 418
+C C+ F+SKGA R HL
Sbjct: 1055 KCAFCDTPFISKGAYRHHL 1073
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +2
Query: 485 TCKICLKEYELPSELLRH-VLTDHRKRRL 568
TCK+C + + EL H V H K +
Sbjct: 549 TCKVCDQAFSSLKELSNHMVKNSHYKEHI 577
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 26.6 bits (56), Expect = 0.20
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHL 418
YRC++C+ +FV LR HL
Sbjct: 191 YRCEHCDRQFVQVANLRRHL 210
Score = 26.2 bits (55), Expect = 0.26
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLL 421
Y C++C++KF L+ H+L
Sbjct: 219 YGCEHCSMKFSDSNQLKAHVL 239
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 26.2 bits (55), Expect = 0.26
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 333 CRNQNVWEHIDAIIAMSS 386
C + N+W H+DA A SS
Sbjct: 261 CNSNNIWLHVDAAYAGSS 278
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLT 424
YRC +CN F L H+ T
Sbjct: 22 YRCIDCNKSFSQAANLTAHVRT 43
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHV 541
CK+CL + L RH+
Sbjct: 108 CKLCLLRFSQSGNLNRHM 125
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHL 418
++C C F +KG L+ H+
Sbjct: 163 FKCKICGRAFTTKGNLKTHM 182
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 212 NGQIGKIRQCLHFRLCLLLEIF 147
NG I K Q LH ++C L++ F
Sbjct: 205 NGDIVKEHQNLHNKICNLIDEF 226
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 503 KEYELPSELLRHVLTDHRKR 562
++Y PS+LLRHV ++R
Sbjct: 356 QKYHDPSQLLRHVEESDKQR 375
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = +2
Query: 242 NLLSVLTGEDKKKRSKQPVNNERALNGHRDLSEPKRLGTYRCDNC 376
N+ +VLT KK + + N + + H ++ E + NC
Sbjct: 79 NIYTVLTALTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFVASNC 123
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = +2
Query: 242 NLLSVLTGEDKKKRSKQPVNNERALNGHRDLSEPKRLGTYRCDNC 376
N+ +VLT KK + + N + + H ++ E + NC
Sbjct: 79 NIYTVLTALTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFVASNC 123
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 22.2 bits (45), Expect = 4.3
Identities = 12/46 (26%), Positives = 17/46 (36%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKI 496
+ C CN +F+ L H+ T + SDS N I
Sbjct: 375 FACPICNKRFMRSDHLAKHVKTHNGNGKKGSSDSCSDSEENSQSDI 420
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 102 VIFYETCWFLENKNGTCYEKS 40
+IF+ T FL+N + YEK+
Sbjct: 225 LIFFATLDFLDNVDTIMYEKT 245
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,916
Number of Sequences: 336
Number of extensions: 3326
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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