Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1316
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 47 1e-05
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 40 0.002
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_45123| Best HMM Match : zf-C2H2 (HMM E-Value=0) 39 0.005
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 38 0.011
SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0) 37 0.014
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0) 36 0.043
SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.043
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 35 0.057
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 35 0.075
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 35 0.075
SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 33 0.30
SB_52567| Best HMM Match : zf-C2H2 (HMM E-Value=0) 32 0.40
SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_3592| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_3590| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_44864| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0) 32 0.53
SB_43891| Best HMM Match : zf-C2H2 (HMM E-Value=3e-30) 32 0.53
SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0) 32 0.53
SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41) 31 0.70
SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_55739| Best HMM Match : Protamine_P2 (HMM E-Value=1.9) 30 1.6
SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.6
SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.6
SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 2.1
SB_42825| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_42899| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_43018| Best HMM Match : Ank (HMM E-Value=2.6e-08) 29 2.8
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_37102| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.9
SB_24580| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.9
SB_10554| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.9
SB_44860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_5241| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_32644| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.5
SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_5064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_18526| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.5
SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.6
SB_45205| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_28015| Best HMM Match : 7tm_1 (HMM E-Value=0.056) 28 8.6
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/109 (30%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHL------LTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELP 520
Y C+ C KF KG L H+ LT P++ +TC IC K Y
Sbjct: 215 YLCEKCEWKFSQKGHLERHMRTVHRPLTSEEGSESQRRIPPAEQP--QTCDICKKVYASA 272
Query: 521 SELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHPGRE 667
L HV T H R P C++C + R W H + HP E
Sbjct: 273 RVLKVHVQTVHEGER-----PHKCKYCEATFTQRGHLWRHKHTVHPDCE 316
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHPGRE 667
C IC +E+ + L+ H+ R ++ + +C+ CN + +RE H HP +
Sbjct: 60 CSICDEEFHDWNALMTHI----RNQKNNPEHKNSCKECNVQFADKREKRRHVRVSHPPPQ 115
Query: 668 G 670
G
Sbjct: 116 G 116
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+C+ C+ +VS ++ H+ T + +KTC++C K + P + +H
Sbjct: 2596 YKCNKCSNSYVSFSEMKKHMRTVH------------NCRPSKTCELCSKMFCRPEYVAKH 2643
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSR 622
V H K R P C HC++ +S+
Sbjct: 2644 VSMVHEKER-----PYRCIHCDRRFTSK 2666
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+C+ C+ +VS ++ H+ T PS KTC++C K + P + +H
Sbjct: 3726 YKCNKCSNSYVSFSEMKKHMSTVHHCR-------PS-----KTCELCSKMFCRPEYVAKH 3773
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSR 622
V H K R P C HC++ +S+
Sbjct: 3774 VSMVHEKER-----PYRCIHCDRRFTSK 3796
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/88 (26%), Positives = 42/88 (47%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+C+ C+ +VS ++ H+ T + +KTC++C K++ P + +H
Sbjct: 2794 YKCNKCSNSYVSFSEMKKHMRTVH------------NCRPSKTCELCGKKFCTPEYVAKH 2841
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSR 622
V H K R P C HC++ +S+
Sbjct: 2842 VSMVHGKER-----PYRCIHCDRGFTSK 2864
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+C+ C +VS ++ H+ T + +KTC++C K + P + +H
Sbjct: 3306 YKCNKCRNSYVSFSEMKKHMSTVH------------NCRPSKTCELCGKMFCTPEYVAKH 3353
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSR 622
V H K R P C HC++ +S+
Sbjct: 3354 VSMVHEKER-----PYRCIHCDRRFTSK 3376
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+C+ C+ +VS ++ H+ T + +KTC++C K + P + +H
Sbjct: 3096 YKCNKCSNSYVSFSEMKKHMSTVH------------NCRPSKTCELCGKMFCTPEYVAKH 3143
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSR 622
V H K R P C HC++ +S+
Sbjct: 3144 VSMVHGKMR-----PYRCIHCDRRFTSK 3166
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+C+ C +VS ++ H+ T +S +KTC++C K + P + +H
Sbjct: 3516 YKCNKCRNSYVSFSEMKKHMSTVH------------NSRPSKTCELCSKIFCRPEYVAKH 3563
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSR 622
V H K R P C C++ +S+
Sbjct: 3564 VSMVHGKMR-----PYRCIQCDRRFTSK 3586
Score = 34.3 bits (75), Expect = 0.100
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLK---EYELPSEL 529
++C C ++F SK L HLL PS NK +C K + SEL
Sbjct: 907 FKCKYCVLQFESKKILVSHLLAIHLKQHTPFSEEPSTMG-NKAFHLCTKCKVTFSHFSEL 965
Query: 530 LRHVLTDHRKRRLKETYPTNCEHCNKMVSSRR---EHWW 637
L+H + H NCE C+ SS +H+W
Sbjct: 966 LKHTKSAH-----NYLPSDNCEVCHHTFSSAEHVSKHFW 999
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 485 TCKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSR 622
TC +C KE++ + +H+ H K +P CEHC++ S+
Sbjct: 1270 TCDLCGKEFKNAEYMTKHIRMVHHK-----LWPYRCEHCHRQFPSK 1310
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+C+ C+ +VS ++ H+ T + +KTC++C K + P + +H
Sbjct: 3936 YKCNKCSNSYVSFSEMKKHMRTVH------------NCRPSKTCELCGKMFCTPEYVAKH 3983
Query: 539 VLTDHRKRR 565
V H K R
Sbjct: 3984 VSMVHGKMR 3992
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 476 TNKTCKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKM 610
T CK C + + S+L +H+ +DH E P CE+C K+
Sbjct: 596 TENRCKRCNERFNTFSDLSKHLDSDH------EIEPRTCEYCGKV 634
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/99 (22%), Positives = 39/99 (39%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
++C C +F S G + H+ T ++ +KTC +C K + + H
Sbjct: 2339 FQCTRCRSRFASFGEMSKHMRTLH------------NTRPSKTCNLCQKTFCTAEYVWVH 2386
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEH 655
H + R P CE+C ++S+ H + H
Sbjct: 2387 NKMVHERSR-----PYRCEYCGWHLASKSNLTLHIKRIH 2420
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/100 (29%), Positives = 39/100 (39%)
Frame = +2
Query: 362 RCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRHV 541
+C C F +KG LR H+LT S T C C K++ P L RH
Sbjct: 896 QCRFCEENFPTKGDLRKHVLT----CDKKEEKVKSKEVTLHVCDQCSKDFASPYNLRRHQ 951
Query: 542 LTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHPG 661
LT H + P CE C + + H ++H G
Sbjct: 952 LT-HTDEK-----PFQCEVCARQFKEKSSLSKHIKRKHTG 985
>SB_45123| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 336
Score = 38.7 bits (86), Expect = 0.005
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +2
Query: 266 EDKKKRSKQPVNNERALNGHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLLTXXXXXXX 445
ED ++ SK N+ + N ++ SE +RCD C F +K L +HL
Sbjct: 138 EDDEQVSKANRINKTSKNKLKEKSEK---AIHRCDQCGKIFKTKYTLSIHL--------- 185
Query: 446 XXXXAPSDSNTNK-TCKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNK 607
P + + C IC K + L S L RH + +K+ P CE CNK
Sbjct: 186 ---KMPDHTESRPFVCNICGKGFRLSSTLCRHKIIHTQKK------PHKCEVCNK 231
Score = 24.2 bits (50), Expect(2) = 3.5
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 299 NNERALNGH-RDLSEPKRLGTYRCDNCNVKFVSKGALRVHLL 421
N L H R SE K + CD C F KG LR H++
Sbjct: 234 NRSSTLKTHVRTHSEEK---AFVCDICGKGFHQKGNLRNHIM 272
Score = 23.4 bits (48), Expect(2) = 3.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDH 553
CK C K++E ++L +H + H
Sbjct: 310 CKTCRKKFEKKTDLKQHNMDIH 331
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 37.5 bits (83), Expect = 0.011
Identities = 27/87 (31%), Positives = 36/87 (41%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y C+ C F+ LR H + P+ + TC C K + S+L+RH
Sbjct: 175 YVCEICGKAFIQSNGLRFHQIVHTGAQ-------PNGCKIH-TCDFCSKAFGRHSDLVRH 226
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSS 619
V T H R P CEHC K +S
Sbjct: 227 VRT-HTGAR-----PFQCEHCPKAFTS 247
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = +2
Query: 485 TCKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSS----RREHWWHTYKE 652
TC C KE+ + RH+ R + P C HC+K S +R HT KE
Sbjct: 120 TCSYCGKEFNTSRNMKRHI------RFHTQEKPYKCSHCSKAFSDASILKRHTRTHT-KE 172
Query: 653 HP 658
P
Sbjct: 173 KP 174
>SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 462
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/99 (27%), Positives = 44/99 (44%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+C+ C++ + GAL HL+ +P ++ CK C K + L +H
Sbjct: 256 YKCNECDMCYAKSGALSRHLMV-------HTGKSPDQCKPHR-CKECGKCFSRSGNLKKH 307
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEH 655
+LT H ++R P C+ C K WH +K+H
Sbjct: 308 LLT-HSEQR-----PYQCDECGKCFKMP----WH-FKDH 335
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/82 (32%), Positives = 36/82 (43%)
Frame = +2
Query: 317 NGHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKI 496
NG++ + KR Y CD CN F K L HL T A SN+ C
Sbjct: 60 NGNKKIKRRKR---YYCDFCNTTFGKKWGLTRHLKT--------LAHAQVTSNSQCMCGN 108
Query: 497 CLKEYELPSELLRHVLTDHRKR 562
C K+ P L +H+ T H+K+
Sbjct: 109 CGKDMATPERLAKHMET-HKKK 129
Score = 32.3 bits (70), Expect = 0.40
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 10/127 (7%)
Frame = +2
Query: 257 LTGEDKKKRSKQPVNNERALNGH--RDLSEPKRLGTYR--------CDNCNVKFVSKGAL 406
LT K Q +N + + G+ +D++ P+RL + CD C +FV +L
Sbjct: 86 LTRHLKTLAHAQVTSNSQCMCGNCGKDMATPERLAKHMETHKKKFGCDICEKEFVFYSSL 145
Query: 407 RVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRHVLTDHRKRRLKETYPT 586
H + N N C +C KE++ PS+L H+ R+ + P
Sbjct: 146 EKH------------RKVHQERNPNH-CHLCEKEFDTPSKLKVHM------RKHTQEKPY 186
Query: 587 NCEHCNK 607
CE C K
Sbjct: 187 ECETCGK 193
>SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 615
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/71 (21%), Positives = 30/71 (42%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+C+ C +F +KG ++ H+ + + C IC + ++L RH
Sbjct: 426 YKCEYCGKEFRTKGCIKAHIKYHIGTIVLMSSDSGGGGDKRHKCSICGHAFVKSADLKRH 485
Query: 539 VLTDHRKRRLK 571
V + ++ K
Sbjct: 486 VAAHNNEKNYK 496
>SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 35.5 bits (78), Expect = 0.043
Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 5/123 (4%)
Frame = +2
Query: 302 NERALNGH-RDLSEPKRLGTYRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNT 478
NE L H R + + +R Y+C C F+S L H+ T +
Sbjct: 327 NESYLKEHIRGVHKGQR--PYKCGECGKCFLSISHLSDHVRTVH------------EKRR 372
Query: 479 NKTCKICLKEYELPSELLRHVLTDHR----KRRLKETYPTNCEHCNKMVSSRREHWWHTY 646
CKIC ++ LL H+ H + LK P C C K S + H +
Sbjct: 373 RHQCKICSTDFLKKCRLLEHIKRLHNIDLFRPNLKRDKPFQCCQCGKRFSDSKLLESHEW 432
Query: 647 KEH 655
KEH
Sbjct: 433 KEH 435
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREH 631
C C + S+L+RHV + H K + P C+ C+K SR+ H
Sbjct: 232 CIQCGHRFRRSSDLVRHVSSVHSKIK-----PHKCQECSK-AFSRKSH 273
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHPGR 664
C+ C K + S L H+L+ H + + CE C K S + H H G+
Sbjct: 261 CQECSKAFSRKSHLRNHILSMHTHDQFE------CEQCQKFFDSYNQLHNHQKTIHGGK 313
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 275 KKRSKQPVNNERALNGHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLL 421
+K+ K PV+ + + G L P Y+CD C+ KFV K L H L
Sbjct: 509 EKKFKHPVSLNKHVRGVHSLERP-----YKCDQCDKKFVRKDYLSTHRL 552
Score = 29.1 bits (62), Expect = 3.7
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Frame = +2
Query: 350 LGTYRCDNCNVKFVSKGALRVH-LLTXXXXXXXXXXXAPSDSNTNKT---CKICLKEYEL 517
L T+ C C+ F ++ L H +L + S+T+ C C K ++
Sbjct: 113 LKTFTCKKCHQIFNNRSKLIKHQMLAHSMQIGRKRHRKETSSSTHSITYMCTTCEKVFKS 172
Query: 518 PSELLRHVLTDHRKRRLKETYPTNCEHCNKMVS---SRREHWWHTYKE 652
+L RH T R + C HC K+ S R++H+ +K+
Sbjct: 173 SHQLERHKSTHARVYK--------CPHCKKVFSDKEKRKDHYISAHKK 212
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/88 (26%), Positives = 36/88 (40%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y CD C F + LR+HLL C+IC K + L RH
Sbjct: 329 YSCDKCEKSFRGRTNLRLHLLVHSLEKPY-------------QCEICSKSFTRKDCLNRH 375
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSR 622
++T H +++ + C C K++ S+
Sbjct: 376 LMT-HVDPSMRKKHV--CLECVKVLPSK 400
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 34.7 bits (76), Expect = 0.075
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Frame = +2
Query: 338 EPKRLGTYRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYEL 517
E + G ++C+ C+ +S+ L+ HLLT +PS C C + ++
Sbjct: 848 EVQAKGNFKCEQCDKSLLSQYYLKRHLLT--------HTRSPS-------CASCKETFDS 892
Query: 518 PSELLRHVLTDHRKRRLKETYPTNCEHCNK---MVSSRREHWWHTYKE 652
L HV K++ +ETY CE C+K VSS + H+ + K+
Sbjct: 893 RENLDAHVNAGCPKKKPQETY--TCEVCDKGFSRVSSYKTHFRYHSKD 938
Score = 31.1 bits (67), Expect = 0.93
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 19/128 (14%)
Frame = +2
Query: 299 NNERALNGHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNT 478
N + + HR+++ G ++CD C F++K L+ H + DS
Sbjct: 953 NRQSLIEHHREVTAE---GDFKCDVCEKCFITKAHLKTHKVVHTRQPRCSSCKETFDSKE 1009
Query: 479 NK-------------------TCKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHC 601
N TC++C K + S H + K++ C HC
Sbjct: 1010 NLKQHSSAGCPEKSSQEREAYTCQVCDKAFSRVSSYKTHF-----RYHSKDSLTFKCSHC 1064
Query: 602 NKMVSSRR 625
N+ S+R+
Sbjct: 1065 NETFSNRQ 1072
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/100 (24%), Positives = 35/100 (35%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
+ C C+ F SKG L H + SD + C C K +++ +L H
Sbjct: 354 FPCPQCDKVFSSKGFLAKHEVIH------------SDQRPH-VCMECGKSFKMACQLAMH 400
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHP 658
K+ +P C C K + H EHP
Sbjct: 401 -----SKKHTNADHPHECSTCQKTFEGKLSLISHIKSEHP 435
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 34.7 bits (76), Expect = 0.075
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Frame = +2
Query: 365 CDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAP--SDSNTNK-TCKICLKEYELPSELLR 535
CD+CN F + LR H+ T P ++ T + CK C + + +L
Sbjct: 300 CDHCNRTFYIRELLRQHIKTVVKNLEGKIRIIPELTEPQTREFRCKECGELFPKEDKLNA 359
Query: 536 HVLTDHRKRRLKETYPTNCEHCNKMVSSRREH-WWHTYKEHPGR 664
HVL H + E + C C + ++ R H HT K+ GR
Sbjct: 360 HVL-KHPNYKAFECH--ICHSCYETLACLRRHATVHTTKQRKGR 400
>SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/92 (28%), Positives = 38/92 (41%)
Frame = +2
Query: 344 KRLGTYRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPS 523
K+ T++C++C F L+ H+ T C+IC K + +
Sbjct: 513 KKKKTHQCEHCKKIFNRPHHLKAHVNTTHL------------GEKRFKCEICEKCFGFLT 560
Query: 524 ELLRHVLTDHRKRRLKETYPTNCEHCNKMVSS 619
L RHV T H K + P +CE C K SS
Sbjct: 561 HLKRHVKTVHEKEK-----PHHCEKCGKCFSS 587
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVS 616
C +C K + L S L RH+ T H+ + K CE C K S
Sbjct: 666 CDVCKKIFGLSSSLSRHIRTVHQDKAFK------CERCEKKFS 702
Score = 31.1 bits (67), Expect = 0.93
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
++CD CN+ F + +L+ H+ D C C K + +LL H
Sbjct: 605 FKCDQCNLLFSWQCSLKSHI-----------REVHKDVEKRSKCDECQKCFHRHRDLLTH 653
Query: 539 VLTDHRKRRLKETYPTNCEHCNKM 610
T H+K + P C+ C K+
Sbjct: 654 KRTVHKKEK-----PYKCDVCKKI 672
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 32.7 bits (71), Expect = 0.30
Identities = 32/101 (31%), Positives = 45/101 (44%)
Frame = +2
Query: 323 HRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICL 502
HR L KR ++C NC+ F + AL H +T S S K C+ C
Sbjct: 554 HRALHTEKR--PFKCPNCSKAFKTSYALTSHQVTH------------SASKPYK-CQECG 598
Query: 503 KEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRR 625
+E+ S+ L DHR + ET P CE C+K ++ R
Sbjct: 599 QEFARQSQ-----LNDHRLKHTGET-PFVCEVCSKSFTTSR 633
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEH 655
C+IC K + + +L T H KR E P C+HC+K ++ ++ H H
Sbjct: 1001 CQICHKSFHMAGDL-----TKHAKRHSGEK-PFPCQHCSKCFATAQQARKHANSHH 1050
>SB_52567| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 370
Score = 32.3 bits (70), Expect = 0.40
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +2
Query: 356 TYRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNK-TCKICLKEYELPSELL 532
TY+CD C F +K L +HL PS + C IC K + L S L
Sbjct: 201 TYQCDQCGKVFKTKYTLTIHL------------KMPSHTGARPFVCAICGKGFRLSSTLC 248
Query: 533 RHVLTDHRKRRLKETYPTNCEHCNK 607
RH + H + P C C K
Sbjct: 249 RHKII-HTSHK-----PHQCTTCGK 267
>SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 32.3 bits (70), Expect = 0.40
Identities = 23/82 (28%), Positives = 33/82 (40%)
Frame = +2
Query: 308 RALNGHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKT 487
+ L GH + L +CD+CN K ALR H+ T
Sbjct: 334 KELEGHLSSNHSNVL--LKCDSCNEMVTGKRALRNHMKKVH-------------QTTTTK 378
Query: 488 CKICLKEYELPSELLRHVLTDH 553
C+ C KE+ +L RHV ++H
Sbjct: 379 CEFCKKEFTALEDLERHVSSNH 400
Score = 31.9 bits (69), Expect = 0.53
Identities = 26/97 (26%), Positives = 38/97 (39%)
Frame = +2
Query: 365 CDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRHVL 544
C CN F + LRVH+ + S C C + + EL H+
Sbjct: 295 CKLCNELFEGEKRLRVHI-------------SKSHQEETTKCTFCRQRFITLKELEGHLS 341
Query: 545 TDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEH 655
++H LK C+ CN+MV+ +R H K H
Sbjct: 342 SNHSNVLLK------CDSCNEMVTGKRALRNHMKKVH 372
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 314 LNGHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLLT 424
L H L ++CD CN F+ K LR H+LT
Sbjct: 86 LKDHVKLHNDNLEKPHKCDLCNWAFLLKKDLRRHMLT 122
>SB_3592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 293
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 299 NNERALNGHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLL 421
N ALN H + ++ Y+CD C+ F G+LR HL+
Sbjct: 196 NQSGALNSHLRIHSGQK--PYKCDECDKCFSEAGSLRKHLM 234
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 299 NNERALNGHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHL 418
N ALN H + ++ Y+CD C F GAL HL
Sbjct: 168 NQSGALNSHLRIHSGQK--PYKCDECGKCFNQSGALNSHL 205
>SB_3590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 32.3 bits (70), Expect = 0.40
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+CD C F+ G +++HL+T S K C +C K + ++L RH
Sbjct: 358 YKCDECGKCFIQSGEVKIHLMTH------------SGQKPYK-CNVCDKGFTRHADLNRH 404
Query: 539 VLTDHRKRRLKETYPTNCEHCNK 607
L H ++ P C+ C K
Sbjct: 405 -LRIHSGQK-----PYKCDECGK 421
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLT 424
Y+CD C F G +++HL+T
Sbjct: 190 YKCDECGKCFNQSGEVKIHLMT 211
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +2
Query: 305 ERALNGHRDLSEPKRLGT----YRCDNCNVKFVSKGALRVHLL 421
++ H DL+ R+ + Y+CD C F K L+ HL+
Sbjct: 392 DKGFTRHADLNRHLRIHSGQKPYKCDECGKCFTRKTTLKTHLM 434
>SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 978
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +2
Query: 476 TNKTCKICLKEYELPSELLRHVLTDHRKRRL-KETYPT-NCEHCNKMVSSRREHWWHTYK 649
T+K C C K + + LRH+ HR ET CEHC RR+ H
Sbjct: 232 TSKECPQCGKVFNRGRDTLRHIRAVHRDTLPDSETVEDFECEHCKHCFKRRRDRDLHIKV 291
Query: 650 EH 655
H
Sbjct: 292 VH 293
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNK 607
C C K + P +L RH + H + P CEHC +
Sbjct: 90 CDQCSKTFTRPHDLRRHTKSIHNGEK-----PYKCEHCGR 124
>SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 31.9 bits (69), Expect = 0.53
Identities = 29/117 (24%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Frame = +2
Query: 299 NNERALNGHRDLSEPKRLG-TYRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSN 475
N RAL H D P+ T+ CD C F+++G LR H +
Sbjct: 206 NRHRAL--HSDKQNPETNNKTFHCDKCGKGFLTQGYLRNHGIV--------------HRE 249
Query: 476 TNKTCKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTY 646
+ C C K++ + D +R + P NC C K + +R H Y
Sbjct: 250 KSHGCSYCNKKF------TSKIFLDAHTKRHEAMVPYNCSLCEKSFAKKRSLKSHMY 300
>SB_44864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
++CD C +F G L+VHL+T C C K + L L H
Sbjct: 197 HQCDQCGKRFTRSGNLKVHLITHA-------------GQKPHQCDECGKRFTLSRHLKLH 243
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWH--TYKEHP 658
++T ++ P C+ C K + H TY + P
Sbjct: 244 LITHSGQK------PHRCDQCGKRFTRSESLKRHLITYSQKP 279
>SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1346
Score = 31.9 bits (69), Expect = 0.53
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHPGRE 667
C C K + S+L RH++T H ++R P +CE C K + + H H G+E
Sbjct: 1171 CPQCPKTFATSSKLGRHIVT-HSEQR-----PFSCEQCMKSFNRSGDLRRHCMTVHEGKE 1224
>SB_43891| Best HMM Match : zf-C2H2 (HMM E-Value=3e-30)
Length = 130
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
++CD C +F G L+VHL+T C C K + L L H
Sbjct: 5 HQCDQCGKRFTRSGNLKVHLITHA-------------GQKPHQCDECGKRFTLSRHLKLH 51
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWH--TYKEHP 658
++T ++ P C+ C K + H TY + P
Sbjct: 52 LITHSGQK------PHRCDQCGKRFTRSESLKRHLITYSQKP 87
>SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1741
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHPGR 664
C +C K + S LL HV H + + C++C + +++ + H + R
Sbjct: 1496 CIVCRKGFTARSRLLHHVKAHHNMKTKSNIF--TCKYCGRAITNHSDFLLHVERHEQSR 1552
>SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)
Length = 257
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHPGRE 667
C +C K ++ S L H+L +T P CE C K + + HTY H G +
Sbjct: 149 CNVCEKAFKRSSTLSTHMLIH------SDTRPFECEFCGKKFHQKSDMKKHTY-THTGEK 201
>SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 31.5 bits (68), Expect = 0.70
Identities = 26/83 (31%), Positives = 31/83 (37%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+CD C F + LR H + S N K C C K Y L S L RH
Sbjct: 28 YKCDECGKCFTRRAYLRAHAIIH------------SGQNPYK-CNECGKCYNLSSSLKRH 74
Query: 539 VLTDHRKRRLKETYPTNCEHCNK 607
+ T E P C+ C K
Sbjct: 75 LRTH------SEQNPYKCDVCGK 91
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 311 ALNGHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLL 421
ALN H + ++ Y+CD C+ F G+LR H+L
Sbjct: 182 ALNSHLRIHTGQK--PYKCDECDKCFSEAGSLRKHVL 216
>SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/87 (32%), Positives = 40/87 (45%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+CD+CN ++ S AL H T +S+++ TC C K + L RH
Sbjct: 362 YKCDDCNKRYFSYDALEAHKQT--------------ESHSH-TCDECGKVFHSQIYLKRH 406
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSS 619
T H + R +P CE CNK +S
Sbjct: 407 -KTVHVEER---NFP--CEICNKAYTS 427
>SB_55739| Best HMM Match : Protamine_P2 (HMM E-Value=1.9)
Length = 678
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 563 RLKETYPTNCEHCNKMVSSRREH 631
R+ TYP+NC C K V++RR +
Sbjct: 15 RVVVTYPSNCASCGKYVNARRRN 37
>SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 426
Score = 30.3 bits (65), Expect = 1.6
Identities = 26/83 (31%), Positives = 30/83 (36%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
Y+CD C F LR H + S N K C C K Y L S L RH
Sbjct: 63 YKCDECGKCFTRPAYLRAHAIIH------------SGQNPYK-CNECGKCYNLSSSLKRH 109
Query: 539 VLTDHRKRRLKETYPTNCEHCNK 607
+ T E P C+ C K
Sbjct: 110 LRTH------SEQNPYKCDVCGK 126
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 311 ALNGHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLL 421
ALN H + ++ Y+CD C+ F G+LR H+L
Sbjct: 217 ALNSHLRIHTGQK--PYKCDECDKCFSEAGSLRKHVL 251
>SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 757
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLL 421
++CD C FV+KGAL++H++
Sbjct: 666 HKCDICGKGFVNKGALKLHIV 686
>SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 928
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLT 424
Y+C+ CN FV AL HLLT
Sbjct: 704 YKCEICNKGFVQSSALSSHLLT 725
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHPG 661
C+IC K + S L H+LT KR P C C + SR +H + H G
Sbjct: 706 CEICNKGFVQSSALSSHLLTHSGKR------PYECLTCGQTFRSRSNLLYHE-RRHRG 756
>SB_42825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHPGRE 667
C IC KE+ L + L RH KR + CE C K + + H K + +E
Sbjct: 199 CDICKKEFSLKTNLARH------KRSVHGNQSFQCEKCEKSFNRKDTFKRHMRKYNQEKE 252
>SB_42899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/99 (25%), Positives = 32/99 (32%)
Frame = +2
Query: 320 GHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKIC 499
GH+ L G Y C+ C F K HL + C+ C
Sbjct: 241 GHKKLISEGAPGNYSCERCGKVFAYKYYRERHL---------KYTRCVDQGDRRFPCEQC 291
Query: 500 LKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVS 616
+ ++ L HVL H K R P C C K S
Sbjct: 292 DRSFDKRDRLRIHVLHVHEKHR-----PHECHVCKKRFS 325
>SB_43018| Best HMM Match : Ank (HMM E-Value=2.6e-08)
Length = 169
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 254 VLTGEDKKKRSKQPVNNERALNGHRDLSEPKRLGTYR 364
+ TGED K+ + VN++ N H S P+ + R
Sbjct: 17 ITTGEDHKEEKNEKVNSDEYRNRHNSQSSPETVNPRR 53
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHL-----LTXXXXXXXXXXXAPSDSNTN---KTCKICLKEYE 514
Y+C+NC+ F + +L HL T S S T C C K++
Sbjct: 56 YQCNNCSKAFDNSASLSRHLGWHGRKTPNKHETQEVKATSSPSTTEPFAHQCTCCSKKFN 115
Query: 515 LPSELLRHVLTDHRKRRLKETYP 583
S L+H +T H K R ++ P
Sbjct: 116 NSSRFLKH-MTWHTKTRRLDSPP 137
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = -1
Query: 132 IFEAVSY*R*VIFYETCWFLENKNGTCYEKSRERLFTKTNES 7
+FE+ +Y YETC LEN+ GT E SRE L K +S
Sbjct: 1289 VFESNNYGDAKELYETCNKLENEIGTLRE-SREELSKKYTQS 1329
>SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1780
Score = 29.1 bits (62), Expect = 3.7
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 3/127 (2%)
Frame = +2
Query: 260 TGEDKKKRSKQPVNNERALNGHRDLSEPKRLGT---YRCDNCNVKFVSKGALRVHLLTXX 430
+G + Q ++++ + + P+ G+ +C+ C F S AL H LT
Sbjct: 461 SGSSSPTPTSQDESSDKKILQAKAKGRPRPYGSRPEIKCEQCGKIFGSSSALAKHKLTH- 519
Query: 431 XXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKM 610
SD C IC K ++ L H++T HR ++ E +C+
Sbjct: 520 -----------SDER-RYVCSICSKGFKRQDHLNGHMVT-HRDKKPYECSYADCDKSYCD 566
Query: 611 VSSRREH 631
+ S R H
Sbjct: 567 MRSLRRH 573
>SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEH 655
C C K + S L HV R+ P C+HC K +S H H + H
Sbjct: 411 CPYCEKAFTASSILRTHV------RQHSGEKPFKCKHCGKAFASHAAHDSHVRRTH 460
>SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHL 418
Y+C CN KF+S LR H+
Sbjct: 279 YKCSICNWKFISSSNLRTHI 298
>SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/98 (22%), Positives = 39/98 (39%)
Frame = +2
Query: 329 DLSEPKRLGTYRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKE 508
DL+ K Y C+ C + K L++H+ CK C K
Sbjct: 532 DLNSKKVNKGYLCELCGKLYTRKYGLKIHMRIHTGYKPL-------------KCKYCQKR 578
Query: 509 YELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSR 622
+ PS + +H+ R + +T P C++C K++ +
Sbjct: 579 FGDPSNMAKHI----RLHAVGDT-PYKCQYCGKVLKDQ 611
>SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHPGRE 667
C IC KE+ L + L RH KR + CE C + ++ + H K + +E
Sbjct: 497 CDICKKEFSLKTNLARH------KRSVHGNQSFQCEKCEQSLNRKDTFKRHMKKYNQEKE 550
>SB_37102| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 618
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 10/109 (9%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHL----LTXXXXXXXXXXXAPSDSNTNK------TCKICLKE 508
++C C +KF L+ HL + + DS + C C+
Sbjct: 289 FKCTQCFLKFTRHSDLQKHLTHDHVNPFKCHNFDVEMSEEDSTDGEHGEKPFRCTQCVMS 348
Query: 509 YELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEH 655
+ PS+L RH+L + P CE C+ R W+ +++H
Sbjct: 349 FTRPSDLQRHLLIHSNSK------PYKCEECD-----REFTWFGNFQKH 386
>SB_24580| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 366
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHL 418
YRCD C F GAL HL
Sbjct: 174 YRCDECGKGFTQSGALNRHL 193
>SB_10554| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 194
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHL 418
YRCD C F GAL HL
Sbjct: 75 YRCDECGKGFTQSGALNRHL 94
>SB_44860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLL 421
Y+CD C F G L++HLL
Sbjct: 81 YKCDECGKCFGRSGTLKIHLL 101
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLL 421
Y+CD C F G L+ HLL
Sbjct: 249 YKCDECGKSFRRSGHLKTHLL 269
>SB_5241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = -3
Query: 634 PMFPTATNHFVAVFTIRGIRFFESSLAVIGQHVPEQFGRQFVL 506
P +P +HF + + + F+E S V Q + + + F L
Sbjct: 55 PPYPVKISHFPSAMLLNSVSFWEQSFHVAAQSIAKDAKKPFTL 97
>SB_32644| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 365
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTY 646
CK C K ++ S L H+L +T P C++C K + + HTY
Sbjct: 255 CKECGKAFKRSSTLSTHMLIH------SDTRPFPCQYCPKRFHQKSDMKKHTY 301
>SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 488 CKICLKEYELPSELLRHVLTDHRKRRLKETYPTNCEHCNKMVS 616
C +C + +E L H+L H K R P C C K S
Sbjct: 338 CHLCNRSFEKRDRLRIHILHVHEKHR-----PHQCNECGKRFS 375
>SB_5064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 314 LNGHRDLSEPKRLGTYRCDNCNVKFVSKGALRVHLLT 424
L GH+ +R Y C CN F + LR HL T
Sbjct: 635 LQGHKRSHTGER--PYSCPECNKAFADRSNLRAHLQT 669
>SB_18526| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 322
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHL 418
Y+CD C + F GAL+ HL
Sbjct: 50 YKCDECGMGFNQSGALKRHL 69
>SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/100 (24%), Positives = 35/100 (35%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLLTXXXXXXXXXXXAPSDSNTNKTCKICLKEYELPSELLRH 538
+ C C+ F SKG L H + SD + C C K +++ +L H
Sbjct: 286 FPCPQCDKVFSSKGFLAKHEVIH------------SDQRPH-VCMECGKSFKMACQLAMH 332
Query: 539 VLTDHRKRRLKETYPTNCEHCNKMVSSRREHWWHTYKEHP 658
K+ +P C C K + H EHP
Sbjct: 333 -----SKKHTNADHPHECSTCQKTFEGKLSLISHIKSEHP 367
>SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 717
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHLL 421
YRCD C+ F +L+ HLL
Sbjct: 489 YRCDECHSTFTKSTSLKSHLL 509
>SB_45205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 359 YRCDNCNVKFVSKGALRVHL 418
Y+CD C F GAL HL
Sbjct: 302 YKCDECGKCFTQSGALTTHL 321
>SB_28015| Best HMM Match : 7tm_1 (HMM E-Value=0.056)
Length = 239
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 49 VTGSIFIFKKPTGFVKNYSSLIGNSLKNIVFY 144
+ GS F+F P FV + + SL FY
Sbjct: 113 IVGSYFLFNSPVLFVTTFHQIASGSLGTYAFY 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,738,667
Number of Sequences: 59808
Number of extensions: 413554
Number of successful extensions: 1709
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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