Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1315
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   1.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   4.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.4  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   7.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   7.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.4  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 357 FVNKINGKITWKLPAN*GLTPESSHLTETSRCPS 458
           F N+ +G I W LP    +        + S CPS
Sbjct: 216 FDNQCSGTIDWALPNKRTVFIRKGGTAKASMCPS 249


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/50 (22%), Positives = 24/50 (48%)
 Frame = +2

Query: 128 ETNASVLQRSVRLAKYMRTLGLKPGDVLALAGRNHLDLYIPYYAALMNGY 277
           + N++ ++    + KY+  + L    V  LAG       +PY+  ++ G+
Sbjct: 69  DLNSAPIRMKNPIVKYIILIDLGEVAVTVLAGILTTPFKLPYFWKMLTGF 118


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 215 LAGRNHLDLYIPYYAALM 268
           L+G  +LDL +P Y+ L+
Sbjct: 205 LSGTENLDLVLPIYSQLV 222


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 209 LALAGRNHLDLYIPYYAA 262
           LAL+ +N +D    YYAA
Sbjct: 52  LALSNKNAIDFNYYYYAA 69


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 296 PLFKLHEIKSFFKLT 340
           P FKL +I+SF  +T
Sbjct: 34  PSFKLSKIRSFLNIT 48


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +2

Query: 29  IDDPQYHMGHLFMDCMRRRPDSVCQIDAATGETE 130
           +DDP   MGH     M  +P    Q   A GE E
Sbjct: 1   MDDPGRMMGHTGGGLMPPQPYMNAQDAPAGGENE 34


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 314 EIKSFFKLTQPKIAFCQQNQR 376
           E  S  +LT+P++    QN+R
Sbjct: 147 EFSSSLRLTEPQVKIWFQNRR 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,478
Number of Sequences: 336
Number of extensions: 2720
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)