Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1315
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical p... 52 5e-07
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical pr... 37 0.012
U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical p... 37 0.012
AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical... 33 0.14
AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical ... 33 0.14
AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical ... 33 0.14
Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical pr... 33 0.19
AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical ... 33 0.19
Z92812-9|CAM84813.1| 338|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z73102-17|CAA97418.2| 375|Caenorhabditis elegans Hypothetical p... 28 7.1
Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical pr... 27 9.4
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 27 9.4
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 27 9.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 9.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 9.4
AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical ... 27 9.4
AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix metall... 27 9.4
>Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical
protein F28D1.9 protein.
Length = 684
Score = 51.6 bits (118), Expect = 5e-07
Identities = 44/183 (24%), Positives = 71/183 (38%), Gaps = 6/183 (3%)
Frame = +2
Query: 59 LFMDCMRRRPDSVCQIDAATGETETNASVLQRSVRLAKYMRTLGLKPGDVLALAGRNHLD 238
LF+D +++ P+ ID T TET A R A Y + LG + GDV+AL N ++
Sbjct: 114 LFLDIVKKNPNKPAMIDIETNTTETYAEFNAHCNRYANYFQGLGYRSGDVVALYMENSVE 173
Query: 239 LYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLTQPKIAFCQQNQRENYLEAARELGLDT 418
+ G ++ K ++ ++ K + L+A + D
Sbjct: 174 FVAAWMGLAKIGVVTAWINSNLKREQLVHCITASKTKAIITSVTLQNIMLDAIDQKLFDV 233
Query: 419 RVI-TFDGDEPMSK---LLXXXXXXXXXXXQPATFDL--DKVYVWLISTGGTSGVLKVAA 580
I + EP +P T D+ K + I T GT+G+ K A
Sbjct: 234 EGIEVYSVGEPKKNSGFKNLKKKLDAQITTEPKTLDIVDFKSILCFIYTSGTTGMPKAAV 293
Query: 581 IKH 589
+KH
Sbjct: 294 MKH 296
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 161 RLAKYMRTLGLKPGDVLALAGRNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLT 340
++A + TLGL+ GD + + G N+ + + YA G V+P + E++ + T
Sbjct: 98 QMAASLYTLGLEKGDRVGVWGPNYYEWVVLQYACAFAGVIQVNVNPHYLHEELRFVMRKT 157
Query: 341 QPKIAFC-QQNQRENYLEAARE 403
K+ F ++++ NY+ E
Sbjct: 158 GMKVLFAPKRHKHSNYVHTMLE 179
>Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical
protein AH10.1 protein.
Length = 566
Score = 37.1 bits (82), Expect = 0.012
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +2
Query: 89 DSVCQIDAATGETETNASVLQRSVR-LAKYMRTLGLKPGDVLALAGRNHLDLYIPYYAAL 265
D++ IDA T + ++ +V LA + LG KPGDV A A N + I A +
Sbjct: 34 DAIVFIDAETTTKKKLYRDVEPTVNSLATALVKLGFKPGDVAAQAFPNCPEFLIAMLAVM 93
Query: 266 MNGYPITGVDPLFKLHEIKSFFKLTQPKIAFCQQNQ 373
G ++ +F +E++ FK + I F +++
Sbjct: 94 KCGGAMSNASAIFTDYELQLQFKDSNTSIVFTDEDR 129
>U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical
protein ZK1127.2 protein.
Length = 565
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +2
Query: 89 DSVCQIDAATGETETNASVLQRSVR-LAKYMRTLGLKPGDVLALAGRNHLDLYIPYYAAL 265
D+VC IDA T + ++ +V LA + LG KPGDV + A N + + A +
Sbjct: 34 DAVCFIDAETTTKKKLYKDVEPTVNSLATALVKLGFKPGDVASQAFPNCPEFLVAMLAVM 93
Query: 266 MNGYPITGVDPLFKLHEIKSFFKLTQPKIAFCQQNQ 373
G ++ +F +E++ F + I F +++
Sbjct: 94 KCGGAMSNASAIFTDYELQLQFCDSNTSIVFTDEDR 129
>AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical
protein F46E10.1c protein.
Length = 578
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 86 PDSVCQIDAATGETETNASVLQRSVRLAKYMRTLGLKPGDVLALAGRNHLDLYIPYYAAL 265
PD I G +T + V + LA + LGLK GD + + G N + +A+
Sbjct: 35 PDKEFLIFKREGIRKTYSQVATDAENLACGLLHLGLKKGDRIGIWGPNTYEWTTTQFASA 94
Query: 266 MNGYPITGVDPLFKLHEIK 322
+ G + ++P ++ E++
Sbjct: 95 LAGMVLVNINPSYQSEELR 113
>AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical
protein F46E10.1b protein.
Length = 597
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 86 PDSVCQIDAATGETETNASVLQRSVRLAKYMRTLGLKPGDVLALAGRNHLDLYIPYYAAL 265
PD I G +T + V + LA + LGLK GD + + G N + +A+
Sbjct: 54 PDKEFLIFKREGIRKTYSQVATDAENLACGLLHLGLKKGDRIGIWGPNTYEWTTTQFASA 113
Query: 266 MNGYPITGVDPLFKLHEIK 322
+ G + ++P ++ E++
Sbjct: 114 LAGMVLVNINPSYQSEELR 132
>AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical
protein F46E10.1a protein.
Length = 623
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 86 PDSVCQIDAATGETETNASVLQRSVRLAKYMRTLGLKPGDVLALAGRNHLDLYIPYYAAL 265
PD I G +T + V + LA + LGLK GD + + G N + +A+
Sbjct: 80 PDKEFLIFKREGIRKTYSQVATDAENLACGLLHLGLKKGDRIGIWGPNTYEWTTTQFASA 139
Query: 266 MNGYPITGVDPLFKLHEIK 322
+ G + ++P ++ E++
Sbjct: 140 LAGMVLVNINPSYQSEELR 158
>Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 74 MRRRPDSVCQIDAATGETETNASVLQRSVRLAKYMRTLGLKP 199
M D+V + GET +VLQRS+ + +Y+ LG P
Sbjct: 403 MNENDDNVFNVSNNFGETPLYVAVLQRSIEVVEYLLELGASP 444
>AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 74 MRRRPDSVCQIDAATGETETNASVLQRSVRLAKYMRTLGLKP 199
M D+V + GET +VLQRS+ + +Y+ LG P
Sbjct: 403 MNENDDNVFNVSNNFGETPLYVAVLQRSIEVVEYLLELGASP 444
>Z92812-9|CAM84813.1| 338|Caenorhabditis elegans Hypothetical
protein T03E6.9 protein.
Length = 338
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 203 DVLALAGRNHLDLYIPYYAALMNG--YPITGVDPLF 304
D + +A H +Y+PY+ +L+ G ITGV +F
Sbjct: 190 DDMFIADHRHWKIYVPYFCSLIFGAWCSITGVTSVF 225
>Z73102-17|CAA97418.2| 375|Caenorhabditis elegans Hypothetical
protein B0035.16 protein.
Length = 375
Score = 27.9 bits (59), Expect = 7.1
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +2
Query: 134 NASVLQRSVRLAKYMRTLGLKPGDVLALAGRNHLDLYIPYYAALMNGYP--ITGVDPLFK 307
N L+ L ++ + GD++A G +H DLY + L+N +P I DP +
Sbjct: 252 NGKYLEARSHLGFFVSHIHSDTGDIIACEGSHHPDLYASRF--LIN-HPKWIRTFDPFNR 308
Query: 308 LHEIKSFFKL--TQPKIAFCQQNQRENYLEAARELGL 412
+ ++ T P I C ++E +L L L
Sbjct: 309 ISSNNFLCRIQRTHPPIP-CVAEKQEQFLSVIPRLAL 344
>Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical
protein T07C5.1c protein.
Length = 523
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/85 (22%), Positives = 39/85 (45%)
Frame = +2
Query: 137 ASVLQRSVRLAKYMRTLGLKPGDVLALAGRNHLDLYIPYYAALMNGYPITGVDPLFKLHE 316
A +L ++K L K D+L AG + + L+IP Y+ L++ Y +++LH
Sbjct: 26 AKILVYCPSISKSHVLLCSKYADLLHNAGHDTV-LFIPSYSKLLDNYDGAKHAKVWRLHN 84
Query: 317 IKSFFKLTQPKIAFCQQNQRENYLE 391
+ + +A +N +++
Sbjct: 85 VTEAYDTKLGTLANVMENSHIGFID 109
>Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical
protein T07C5.1b protein.
Length = 190
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/85 (22%), Positives = 39/85 (45%)
Frame = +2
Query: 137 ASVLQRSVRLAKYMRTLGLKPGDVLALAGRNHLDLYIPYYAALMNGYPITGVDPLFKLHE 316
A +L ++K L K D+L AG + + L+IP Y+ L++ Y +++LH
Sbjct: 26 AKILVYCPSISKSHVLLCSKYADLLHNAGHDTV-LFIPSYSKLLDNYDGAKHAKVWRLHN 84
Query: 317 IKSFFKLTQPKIAFCQQNQRENYLE 391
+ + +A +N +++
Sbjct: 85 VTEAYDTKLGTLANVMENSHIGFID 109
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 168 ANRTDRCSTDAFVSVSPVAASIWHTESGRLLMQSINRCPMWY*GS-SMLKDILLT 7
AN + + VS P A+ IW S RLL Q+ +R M Y G + LK I +T
Sbjct: 2292 ANLNESLCVECSVSAYPCASIIWTRNSVRLLPQA-DRYTMSYDGECASLKFISVT 2345
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 168 ANRTDRCSTDAFVSVSPVAASIWHTESGRLLMQSINRCPMWY*GS-SMLKDILLT 7
AN + + VS P A+ IW S RLL Q+ +R M Y G + LK I +T
Sbjct: 2307 ANLNESLCVECSVSAYPCASIIWTRNSVRLLPQA-DRYTMSYDGECASLKFISVT 2360
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 168 ANRTDRCSTDAFVSVSPVAASIWHTESGRLLMQSINRCPMWY*GS-SMLKDILLT 7
AN + + VS P A+ IW S RLL Q+ +R M Y G + LK I +T
Sbjct: 18118 ANLNESLCVECSVSAYPCASIIWTRNSVRLLPQA-DRYTMSYDGECASLKFISVT 18171
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 168 ANRTDRCSTDAFVSVSPVAASIWHTESGRLLMQSINRCPMWY*GS-SMLKDILLT 7
AN + + VS P A+ IW S RLL Q+ +R M Y G + LK I +T
Sbjct: 18133 ANLNESLCVECSVSAYPCASIIWTRNSVRLLPQA-DRYTMSYDGECASLKFISVT 18186
>AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical
protein C31B8.8 protein.
Length = 579
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 141 DAFVSV-SPVAASIWHTESGRLLMQSINRCPMWY 43
D F S +PV A++W+ SG +L+ S NR +Y
Sbjct: 432 DLFPSAPTPVNAALWNPISGSMLLFSSNRVYSYY 465
>AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 579
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 141 DAFVSV-SPVAASIWHTESGRLLMQSINRCPMWY 43
D F S +PV A++W+ SG +L+ S NR +Y
Sbjct: 432 DLFPSAPTPVNAALWNPISGSMLLFSSNRVYSYY 465
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,988,424
Number of Sequences: 27780
Number of extensions: 258018
Number of successful extensions: 605
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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