Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1313
         (440 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20 pro...   198   7e-51
BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20 p...   198   7e-51
BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20 p...   198   7e-51
AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20 p...   198   7e-51
AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20 p...   124   1e-28
BC101386-1|AAI01387.1|  576|Homo sapiens PLEKHN1 protein protein.      33   0.44 
AL645608-8|CAI15570.1|  611|Homo sapiens pleckstrin homology dom...    33   0.44 
BC101387-1|AAI01388.1|  663|Homo sapiens PLEKHN1 protein protein.      31   1.3  
D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.               31   2.3  
BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7 pro...    31   2.3  

>L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  198 bits (483), Expect = 7e-51
 Identities = 97/116 (83%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
 Frame = +1

Query: 94  KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 270
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 271 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIAKQITSINIEPGVEVEVTIADA 438
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEI KQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  198 bits (483), Expect = 7e-51
 Identities = 97/116 (83%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
 Frame = +1

Query: 94  KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 270
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 271 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIAKQITSINIEPGVEVEVTIADA 438
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEI KQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  198 bits (483), Expect = 7e-51
 Identities = 97/116 (83%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
 Frame = +1

Query: 94  KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 270
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 271 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIAKQITSINIEPGVEVEVTIADA 438
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEI KQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  198 bits (483), Expect = 7e-51
 Identities = 97/116 (83%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
 Frame = +1

Query: 94  KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 270
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 271 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIAKQITSINIEPGVEVEVTIADA 438
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEI KQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20
           protein.
          Length = 60

 Score =  124 bits (299), Expect = 1e-28
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = +1

Query: 232 KGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIAKQITSINIEPGV 411
           KGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEI KQITSI+IEPGV
Sbjct: 1   KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60


>BC101386-1|AAI01387.1|  576|Homo sapiens PLEKHN1 protein protein.
          Length = 576

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
 Frame = +3

Query: 33  KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PN 200
           +SC S P      +K+   +    QRHR +   G P PP       S    AREG   P 
Sbjct: 473 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PE 526

Query: 201 QWSQETEAACKGPSPHANQDPAYHH 275
            W   T+    G SP  ++DP Y H
Sbjct: 527 PWLPLTD----GRSPRRSRDPGYDH 547


>AL645608-8|CAI15570.1|  611|Homo sapiens pleckstrin homology domain
           containing, family N member 1 protein.
          Length = 611

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
 Frame = +3

Query: 33  KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PN 200
           +SC S P      +K+   +    QRHR +   G P PP       S    AREG   P 
Sbjct: 508 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PE 561

Query: 201 QWSQETEAACKGPSPHANQDPAYHH 275
            W   T+    G SP  ++DP Y H
Sbjct: 562 PWLPLTD----GRSPRRSRDPGYDH 582


>BC101387-1|AAI01388.1|  663|Homo sapiens PLEKHN1 protein protein.
          Length = 663

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
 Frame = +3

Query: 33  KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PN 200
           +SC S P      +K+   +    QRHR +   G P PP       S    AREG   P 
Sbjct: 560 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGSSEP- 614

Query: 201 QWSQETEAACKGPSPHANQDPAYHH 275
            W   T+    G SP  ++DP Y H
Sbjct: 615 -WLPLTD----GRSPRRSRDPGYDH 634


>D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.
          Length = 1088

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +3

Query: 33  KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYPPHQDHSYFSQCALAREGL 188
           +  +S  E +  +G R  SV QRHR TP R + P    +D SY  +   A EGL
Sbjct: 511 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 564


>BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7
           protein.
          Length = 1080

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +3

Query: 33  KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYPPHQDHSYFSQCALAREGL 188
           +  +S  E +  +G R  SV QRHR TP R + P    +D SY  +   A EGL
Sbjct: 503 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 556


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,512,323
Number of Sequences: 237096
Number of extensions: 1585267
Number of successful extensions: 3446
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3446
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)