Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1311
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344822-1|AAR02433.1|  257|Anopheles gambiae CP5039 protein.          25   1.6  
AY344821-1|AAR02432.1|  257|Anopheles gambiae CP5039 protein.          25   1.6  
AY344820-1|AAR02431.1|  257|Anopheles gambiae CP5039 protein.          25   1.6  
AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.          25   2.2  
AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.          25   2.2  
AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.          25   2.2  
AY344816-1|AAR02427.1|  257|Anopheles gambiae CP5039 protein.          25   2.2  
AY344815-1|AAR02426.1|  257|Anopheles gambiae CP5039 protein.          25   2.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   2.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.8  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    23   6.6  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.7  

>AY344822-1|AAR02433.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 452 TGDSLEKLVFNFTVHPNFTLFHIDNNRDSTL 360
           + + L  L  ++   P    FH+DNNR  T+
Sbjct: 214 SNNRLRALDASYWTMPQLETFHVDNNRHMTM 244


>AY344821-1|AAR02432.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 452 TGDSLEKLVFNFTVHPNFTLFHIDNNRDSTL 360
           + + L  L  ++   P    FH+DNNR  T+
Sbjct: 214 SNNRLRALDASYWTMPQLETFHVDNNRHMTM 244


>AY344820-1|AAR02431.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 452 TGDSLEKLVFNFTVHPNFTLFHIDNNRDSTL 360
           + + L  L  ++   P    FH+DNNR  T+
Sbjct: 214 SNNRLRALDASYWTMPQLETFHVDNNRHMTM 244


>AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 452 TGDSLEKLVFNFTVHPNFTLFHIDNNRDSTL 360
           + + L  L  ++   P    FH+DNNR  T+
Sbjct: 214 SNNRLRALDASYWTMPQLETFHVDNNRHLTM 244


>AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 452 TGDSLEKLVFNFTVHPNFTLFHIDNNRDSTL 360
           + + L  L  ++   P    FH+DNNR  T+
Sbjct: 214 SNNRLRALDASYWTMPQLETFHVDNNRHLTM 244


>AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 452 TGDSLEKLVFNFTVHPNFTLFHIDNNRDSTL 360
           + + L  L  ++   P    FH+DNNR  T+
Sbjct: 214 SNNRLRALDASYWTMPQLETFHVDNNRHLTM 244


>AY344816-1|AAR02427.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 452 TGDSLEKLVFNFTVHPNFTLFHIDNNRDSTL 360
           + + L  L  ++   P    FH+DNNR  T+
Sbjct: 214 SNNRLRALDASYWTMPQLETFHVDNNRHLTM 244


>AY344815-1|AAR02426.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 452 TGDSLEKLVFNFTVHPNFTLFHIDNNRDSTL 360
           + + L  L  ++   P    FH+DNNR  T+
Sbjct: 214 SNNRLRALDASYWTMPQLETFHVDNNRHLTM 244


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 241  LNDLNNGLRQSSSSSKVNKAPHTPLTNARDNAEDSIDLKGKVESRLLSMWNNV 399
            LN  +NG   S+SSS  N + H   +++  N+  S    GK ES  +   +NV
Sbjct: 1082 LNRCSNGSCSSTSSSHSNHSSH---SSSSSNSAGSWAGMGKQESHYVMYPSNV 1131


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 212  EPFIAIDNENYGTLKNVVI 156
            E FIAIDN + G  K V+I
Sbjct: 2065 EKFIAIDNNSLGLPKRVLI 2083


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 212  EPFIAIDNENYGTLKNVVI 156
            E FIAIDN + G  K V+I
Sbjct: 2066 EKFIAIDNNSLGLPKRVLI 2084


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
 Frame = -2

Query: 75  SSQVS--IGKFTLWFIWPKF 22
           SS +S  IG   LW  WP F
Sbjct: 215 SSDISAMIGTIFLWIFWPSF 234


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -3

Query: 452 TGDSLEKLV-FNFTVHPNFTLFHIDNNRDSTLPLRSIESSALSRAFVSG 309
           T + + KL+ + F +HP   L +  N  D T+ +  + S+ALS     G
Sbjct: 160 TAECIMKLIAYGFILHPGSYLRNGWNILDFTIVVIGMISTALSNLMKEG 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,603
Number of Sequences: 2352
Number of extensions: 14747
Number of successful extensions: 32
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)