Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1311
         (670 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033024-1|AAH33024.1|  458|Homo sapiens ATG4 autophagy related ...    60   9e-09
BC018678-1|AAH18678.1|  451|Homo sapiens Unknown (protein for IM...    60   9e-09
AK027773-1|BAB55356.1|  446|Homo sapiens protein ( Homo sapiens ...    60   9e-09
AJ320169-1|CAC43939.1|  458|Homo sapiens putative autophagy-rela...    60   9e-09
AJ312234-1|CAC85556.1|  458|Homo sapiens Apg4-C protein protein.       60   9e-09
BC068992-1|AAH68992.1|  474|Homo sapiens ATG4 autophagy related ...    52   2e-06
AK223383-1|BAD97103.1|  474|Homo sapiens APG4 autophagy 4 homolo...    52   2e-06
AJ312332-1|CAC85951.1|  474|Homo sapiens APG4-D protein protein.       52   2e-06
BC000719-1|AAH00719.1|  393|Homo sapiens ATG4 autophagy related ...    33   0.92 
AK125277-1|BAC86110.1|  468|Homo sapiens protein ( Homo sapiens ...    33   0.92 
AK027763-1|BAB55353.1|  380|Homo sapiens protein ( Homo sapiens ...    33   0.92 
AJ504652-1|CAD43219.1|  393|Homo sapiens autophagin-1 protein.         33   0.92 
AC133528-3|AAY14919.1|  393|Homo sapiens unknown protein.              33   0.92 
AB066215-1|BAB83890.1|  392|Homo sapiens Apg4B protein.                33   0.92 
AB023160-1|BAA76787.2|  396|Homo sapiens KIAA0943 protein protein.     33   0.92 
Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.    31   4.9  
BC063640-1|AAH63640.1|  247|Homo sapiens suprabasin protein.           30   6.5  
AY358701-1|AAQ89064.1|  247|Homo sapiens HLAR698 protein.              30   6.5  

>BC033024-1|AAH33024.1|  458|Homo sapiens ATG4 autophagy related 4
           homolog C (S. cerevisiae) protein.
          Length = 458

 Score = 59.7 bits (138), Expect = 9e-09
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = +1

Query: 361 KVESRLLSMWNNVKFGWTVKLKTNFSKESPVWLLGRCYHRK 483
           K++++ +S WNN+K+ W +K KT FS+ SPV LLG+CYH K
Sbjct: 11  KLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFK 51



 Score = 48.4 bits (110), Expect = 2e-05
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = +3

Query: 576 LEGFKSDFVSKIWMTYRREFPTMTGSTFTTD 668
           +E F+ DF+S+IW+TYR EFP + GS  TTD
Sbjct: 76  VEEFRKDFISRIWLTYREEFPQIEGSALTTD 106


>BC018678-1|AAH18678.1|  451|Homo sapiens Unknown (protein for
           IMAGE:4657137) protein.
          Length = 451

 Score = 59.7 bits (138), Expect = 9e-09
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = +1

Query: 361 KVESRLLSMWNNVKFGWTVKLKTNFSKESPVWLLGRCYHRK 483
           K++++ +S WNN+K+ W +K KT FS+ SPV LLG+CYH K
Sbjct: 11  KLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFK 51



 Score = 48.4 bits (110), Expect = 2e-05
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = +3

Query: 576 LEGFKSDFVSKIWMTYRREFPTMTGSTFTTD 668
           +E F+ DF+S+IW+TYR EFP + GS  TTD
Sbjct: 76  VEEFRKDFISRIWLTYREEFPQIEGSALTTD 106


>AK027773-1|BAB55356.1|  446|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14867 fis, clone PLACE1002319. ).
          Length = 446

 Score = 59.7 bits (138), Expect = 9e-09
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = +1

Query: 361 KVESRLLSMWNNVKFGWTVKLKTNFSKESPVWLLGRCYHRK 483
           K++++ +S WNN+K+ W +K KT FS+ SPV LLG+CYH K
Sbjct: 11  KLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFK 51



 Score = 48.4 bits (110), Expect = 2e-05
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = +3

Query: 576 LEGFKSDFVSKIWMTYRREFPTMTGSTFTTD 668
           +E F+ DF+S+IW+TYR EFP + GS  TTD
Sbjct: 76  VEEFRKDFISRIWLTYREEFPQIEGSALTTD 106


>AJ320169-1|CAC43939.1|  458|Homo sapiens putative autophagy-related
           cysteine endopeptidase protein.
          Length = 458

 Score = 59.7 bits (138), Expect = 9e-09
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = +1

Query: 361 KVESRLLSMWNNVKFGWTVKLKTNFSKESPVWLLGRCYHRK 483
           K++++ +S WNN+K+ W +K KT FS+ SPV LLG+CYH K
Sbjct: 11  KLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFK 51



 Score = 48.4 bits (110), Expect = 2e-05
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = +3

Query: 576 LEGFKSDFVSKIWMTYRREFPTMTGSTFTTD 668
           +E F+ DF+S+IW+TYR EFP + GS  TTD
Sbjct: 76  VEEFRKDFISRIWLTYREEFPQIEGSALTTD 106


>AJ312234-1|CAC85556.1|  458|Homo sapiens Apg4-C protein protein.
          Length = 458

 Score = 59.7 bits (138), Expect = 9e-09
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = +1

Query: 361 KVESRLLSMWNNVKFGWTVKLKTNFSKESPVWLLGRCYHRK 483
           K++++ +S WNN+K+ W +K KT FS+ SPV LLG+CYH K
Sbjct: 11  KLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFK 51



 Score = 48.4 bits (110), Expect = 2e-05
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = +3

Query: 576 LEGFKSDFVSKIWMTYRREFPTMTGSTFTTD 668
           +E F+ DF+S+IW+TYR EFP + GS  TTD
Sbjct: 76  VEEFRKDFISRIWLTYREEFPQIEGSALTTD 106


>BC068992-1|AAH68992.1|  474|Homo sapiens ATG4 autophagy related 4
           homolog D (S. cerevisiae) protein.
          Length = 474

 Score = 51.6 bits (118), Expect = 2e-06
 Identities = 29/73 (39%), Positives = 41/73 (56%)
 Frame = +1

Query: 256 NGLRQSSSSSKVNKAPHTPLTNARDNAEDSIDLKGKVESRLLSMWNNVKFGWTVKLKTNF 435
           NGL  S +S     +P      A  +  D +D   K +++ L+ WNNVK+GW VK +T+F
Sbjct: 37  NGLGPSGASGPALGSP-----GAGPSEPDEVD---KFKAKFLTAWNNVKYGWVVKSRTSF 88

Query: 436 SKESPVWLLGRCY 474
           SK S + L GR Y
Sbjct: 89  SKISSIHLCGRRY 101



 Score = 44.0 bits (99), Expect = 5e-04
 Identities = 15/31 (48%), Positives = 24/31 (77%)
 Frame = +3

Query: 576 LEGFKSDFVSKIWMTYRREFPTMTGSTFTTD 668
           ++ F+ DFVS++W+TYRR+FP + G   T+D
Sbjct: 109 IQRFQRDFVSRLWLTYRRDFPPLPGGCLTSD 139


>AK223383-1|BAD97103.1|  474|Homo sapiens APG4 autophagy 4 homolog D
           variant protein.
          Length = 474

 Score = 51.6 bits (118), Expect = 2e-06
 Identities = 29/73 (39%), Positives = 41/73 (56%)
 Frame = +1

Query: 256 NGLRQSSSSSKVNKAPHTPLTNARDNAEDSIDLKGKVESRLLSMWNNVKFGWTVKLKTNF 435
           NGL  S +S     +P      A  +  D +D   K +++ L+ WNNVK+GW VK +T+F
Sbjct: 37  NGLGPSGASGPALGSP-----GAGPSEPDEVD---KFKAKFLTAWNNVKYGWVVKSRTSF 88

Query: 436 SKESPVWLLGRCY 474
           SK S + L GR Y
Sbjct: 89  SKISSIHLCGRRY 101



 Score = 44.0 bits (99), Expect = 5e-04
 Identities = 15/31 (48%), Positives = 24/31 (77%)
 Frame = +3

Query: 576 LEGFKSDFVSKIWMTYRREFPTMTGSTFTTD 668
           ++ F+ DFVS++W+TYRR+FP + G   T+D
Sbjct: 109 IQRFQRDFVSRLWLTYRRDFPPLPGGCLTSD 139


>AJ312332-1|CAC85951.1|  474|Homo sapiens APG4-D protein protein.
          Length = 474

 Score = 51.6 bits (118), Expect = 2e-06
 Identities = 29/73 (39%), Positives = 41/73 (56%)
 Frame = +1

Query: 256 NGLRQSSSSSKVNKAPHTPLTNARDNAEDSIDLKGKVESRLLSMWNNVKFGWTVKLKTNF 435
           NGL  S +S     +P      A  +  D +D   K +++ L+ WNNVK+GW VK +T+F
Sbjct: 37  NGLGPSGASGPALGSP-----GAGPSEPDEVD---KFKAKFLTAWNNVKYGWVVKSRTSF 88

Query: 436 SKESPVWLLGRCY 474
           SK S + L GR Y
Sbjct: 89  SKISSIHLCGRRY 101



 Score = 44.0 bits (99), Expect = 5e-04
 Identities = 15/31 (48%), Positives = 24/31 (77%)
 Frame = +3

Query: 576 LEGFKSDFVSKIWMTYRREFPTMTGSTFTTD 668
           ++ F+ DFVS++W+TYRR+FP + G   T+D
Sbjct: 109 IQRFQRDFVSRLWLTYRRDFPPLPGGCLTSD 139


>BC000719-1|AAH00719.1|  393|Homo sapiens ATG4 autophagy related 4
           homolog B (S. cerevisiae) protein.
          Length = 393

 Score = 33.1 bits (72), Expect = 0.92
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 591 SDFVSKIWMTYRREFPTMTGSTFTTD 668
           SD  S++W TYR+ FP + G+  T+D
Sbjct: 44  SDVASRLWFTYRKNFPAIGGTGPTSD 69


>AK125277-1|BAC86110.1|  468|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43287 fis, clone MESAN2006563. ).
          Length = 468

 Score = 33.1 bits (72), Expect = 0.92
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 591 SDFVSKIWMTYRREFPTMTGSTFTTD 668
           SD  S++W TYR+ FP + G+  T+D
Sbjct: 132 SDVASRLWFTYRKNFPAIGGTGPTSD 157


>AK027763-1|BAB55353.1|  380|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14857 fis, clone PLACE1001185. ).
          Length = 380

 Score = 33.1 bits (72), Expect = 0.92
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 591 SDFVSKIWMTYRREFPTMTGSTFTTD 668
           SD  S++W TYR+ FP + G+  T+D
Sbjct: 44  SDVASRLWFTYRKNFPAIGGTGPTSD 69


>AJ504652-1|CAD43219.1|  393|Homo sapiens autophagin-1 protein.
          Length = 393

 Score = 33.1 bits (72), Expect = 0.92
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 591 SDFVSKIWMTYRREFPTMTGSTFTTD 668
           SD  S++W TYR+ FP + G+  T+D
Sbjct: 44  SDVASRLWFTYRKNFPAIGGTGPTSD 69


>AC133528-3|AAY14919.1|  393|Homo sapiens unknown protein.
          Length = 393

 Score = 33.1 bits (72), Expect = 0.92
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 591 SDFVSKIWMTYRREFPTMTGSTFTTD 668
           SD  S++W TYR+ FP + G+  T+D
Sbjct: 44  SDVASRLWFTYRKNFPAIGGTGPTSD 69


>AB066215-1|BAB83890.1|  392|Homo sapiens Apg4B protein.
          Length = 392

 Score = 33.1 bits (72), Expect = 0.92
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 591 SDFVSKIWMTYRREFPTMTGSTFTTD 668
           SD  S++W TYR+ FP + G+  T+D
Sbjct: 44  SDVASRLWFTYRKNFPAIGGTGPTSD 69


>AB023160-1|BAA76787.2|  396|Homo sapiens KIAA0943 protein protein.
          Length = 396

 Score = 33.1 bits (72), Expect = 0.92
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 591 SDFVSKIWMTYRREFPTMTGSTFTTD 668
           SD  S++W TYR+ FP + G+  T+D
Sbjct: 47  SDVASRLWFTYRKNFPAIGGTGPTSD 72


>Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.
          Length = 3925

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +1

Query: 310  PLTNARDNAEDSIDLKGKVESRLLSMWNNVKFGWT-VKLKTNFSKE 444
            P  N  D+AED  D + ++E RL  + +++ F WT +  + +F++E
Sbjct: 3551 PDENGHDHAEDPQDEQERIEERLAYIADHLGFSWTELARELDFTEE 3596


>BC063640-1|AAH63640.1|  247|Homo sapiens suprabasin protein.
          Length = 247

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +1

Query: 205 NGSSGFSIPSHELNDLNNGLRQSSSSSKVNKAPHTPLTN 321
           N  +G +  S E N L NG  QS SSS    A  TPL +
Sbjct: 186 NAHNGVNQASKEANQLLNGNHQSGSSSHQGGATTTPLAS 224


>AY358701-1|AAQ89064.1|  247|Homo sapiens HLAR698 protein.
          Length = 247

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +1

Query: 205 NGSSGFSIPSHELNDLNNGLRQSSSSSKVNKAPHTPLTN 321
           N  +G +  S E N L NG  QS SSS    A  TPL +
Sbjct: 186 NAHNGVNQASKEANQLLNGNHQSGSSSHQGGATTTPLAS 224


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,351,909
Number of Sequences: 237096
Number of extensions: 2088434
Number of successful extensions: 3860
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3860
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)