Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1307
         (617 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1119|AAF50660.1| 1229|Drosophila melanogaster CG10144-P...    31   0.94 
AY089481-1|AAL90219.1|  476|Drosophila melanogaster AT29994p pro...    29   3.8  
AF199485-1|AAF13273.1|  476|Drosophila melanogaster sugar transp...    29   3.8  
AE013599-584|AAF59139.1|  476|Drosophila melanogaster CG17976-PA...    29   3.8  
AE014296-3523|AAF51713.2| 1737|Drosophila melanogaster CG32436-P...    29   5.0  
BT012509-1|AAS93780.1|  543|Drosophila melanogaster AT03686p pro...    29   6.6  
AY052052-1|AAK93476.2|  237|Drosophila melanogaster LP07547p pro...    29   6.6  
AE014134-1057|AAF52347.2|  543|Drosophila melanogaster CG9226-PA...    29   6.6  

>AE014296-1119|AAF50660.1| 1229|Drosophila melanogaster CG10144-PA
            protein.
          Length = 1229

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 180  HGIHEECLERSREDPKRCWRC 242
            HGIHE+C+E S    + C RC
Sbjct: 1169 HGIHEQCMEESETQFEECPRC 1189


>AY089481-1|AAL90219.1|  476|Drosophila melanogaster AT29994p
           protein.
          Length = 476

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 91  FRLLLLCCLYIAVVAAAFPSETRNIEKRDVMESMKNAWNEVVK 219
           F L ++ C Y  ++   +  ETRN + +DV + M+N +   +K
Sbjct: 434 FLLCVVFCAYGFLLTYRYLPETRNRDAKDVAQLMENGFKSKIK 476


>AF199485-1|AAF13273.1|  476|Drosophila melanogaster sugar
           transporter 3 protein.
          Length = 476

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 91  FRLLLLCCLYIAVVAAAFPSETRNIEKRDVMESMKNAWNEVVK 219
           F L ++ C Y  ++   +  ETRN + +DV + M+N +   +K
Sbjct: 434 FLLCVVFCAYGFLLTYRYLPETRNRDAKDVAQLMENGFKSKIK 476


>AE013599-584|AAF59139.1|  476|Drosophila melanogaster CG17976-PA
           protein.
          Length = 476

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 91  FRLLLLCCLYIAVVAAAFPSETRNIEKRDVMESMKNAWNEVVK 219
           F L ++ C Y  ++   +  ETRN + +DV + M+N +   +K
Sbjct: 434 FLLCVVFCAYGFLLTYRYLPETRNRDAKDVAQLMENGFKSKIK 476


>AE014296-3523|AAF51713.2| 1737|Drosophila melanogaster CG32436-PA
           protein.
          Length = 1737

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/61 (22%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = +1

Query: 139 AFPSETR--NIEKRDVMESMKNAW-NEVVKTLSDAGDAVVHVFKPTEKSVIDKMADSVKS 309
           + P E R   +++++++E + N   N ++K L +      H++KP +K ++    +++K+
Sbjct: 769 SIPEEDRFPTVDEKEMVEELINMIINSIIKELPEPQPKRPHLYKPAQKVLLRSDQENLKA 828

Query: 310 L 312
           L
Sbjct: 829 L 829


>BT012509-1|AAS93780.1|  543|Drosophila melanogaster AT03686p
           protein.
          Length = 543

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 409 LIKFGDPNDTIHPQRYCCCNYKVLKSIKPVIASSS 305
           L K+GDP+  + P    CCN   L    P++A+SS
Sbjct: 458 LKKYGDPS--VLPLHSDCCNGVALNPAMPILATSS 490


>AY052052-1|AAK93476.2|  237|Drosophila melanogaster LP07547p
           protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 409 LIKFGDPNDTIHPQRYCCCNYKVLKSIKPVIASSS 305
           L K+GDP+  + P    CCN   L    P++A+SS
Sbjct: 152 LKKYGDPS--VLPLHSDCCNGVALNPAMPILATSS 184


>AE014134-1057|AAF52347.2|  543|Drosophila melanogaster CG9226-PA
           protein.
          Length = 543

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 409 LIKFGDPNDTIHPQRYCCCNYKVLKSIKPVIASSS 305
           L K+GDP+  + P    CCN   L    P++A+SS
Sbjct: 458 LKKYGDPS--VLPLHSDCCNGVALNPAMPILATSS 490


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,585,886
Number of Sequences: 53049
Number of extensions: 508989
Number of successful extensions: 1106
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)