Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1306
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       25   2.4  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   2.4  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   5.4  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   5.4  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   5.4  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   5.4  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   5.4  
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         23   7.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.5  

>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +2

Query: 89  FPNESEKNGKCSSAEYKLEGDVVKVKN 169
           + ++ E++   ++AE+ L+ DV++V N
Sbjct: 170 YDDDDEEDAAAAAAEFPLQKDVIRVTN 196


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3

Query: 96  TNLRRTANALQLNTNWKVTW*RSRTCISSTASRSI*KGRPSSPTTP 233
           T LR T   L+  T     W  + T  ++T ++       S+PTTP
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTKFPTTTTTSAPTTP 144


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +3

Query: 96  TNLRRTANALQLNTNWKVTW*RSRTCISSTASRSI*KGRPSSPTTP 233
           T LR T   L+  T     W  + T  ++T +        S+PTTP
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTP 144


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +3

Query: 96  TNLRRTANALQLNTNWKVTW*RSRTCISSTASRSI*KGRPSSPTTP 233
           T LR T   L+  T     W  + T  ++T +        S+PTTP
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTP 144


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +3

Query: 96  TNLRRTANALQLNTNWKVTW*RSRTCISSTASRSI*KGRPSSPTTP 233
           T LR T   L+  T     W  + T  ++T +        S+PTTP
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTP 144


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +3

Query: 96  TNLRRTANALQLNTNWKVTW*RSRTCISSTASRSI*KGRPSSPTTP 233
           T LR T   L+  T     W  + T  ++T +        S+PTTP
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTP 144


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +3

Query: 96  TNLRRTANALQLNTNWKVTW*RSRTCISSTASRSI*KGRPSSPTTP 233
           T LR T   L+  T     W  + T  ++T +        S+PTTP
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTP 144


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 251 TVTFKFGEISRDGSVQVLATDYNNYAIAYNCKYDD 355
           T+TFK G+         LATDY    +  +  + D
Sbjct: 53  TLTFKDGQTYTQAIAFTLATDYGTVRLMSSYNFTD 87


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 136  QTGR*RGEGQERAYHRRRQEVYRRDGQAHRRRQ*SRKANSHF 261
            Q GR     +E    RRR+E+ R   Q  RR + S+    HF
Sbjct: 1178 QNGRAVSSAEE--LERRRREMERTRRQRQRRARDSQAITIHF 1217


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,267
Number of Sequences: 2352
Number of extensions: 12131
Number of successful extensions: 31
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)