BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1303 (610 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_04_0123 + 17475020-17475243,17475367-17475445,17476295-174763... 28 5.0 11_06_0622 - 25600563-25600817,25601041-25601109,25601251-256014... 28 6.7 02_04_0184 - 20737884-20738179,20738611-20739169,20740009-207404... 28 6.7 >03_04_0123 + 17475020-17475243,17475367-17475445,17476295-17476393, 17476499-17476682,17477139-17477206,17477530-17477787, 17477996-17478049,17478149-17478355,17478507-17478633, 17479409-17479575 Length = 488 Score = 28.3 bits (60), Expect = 5.0 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = -1 Query: 199 RARSSCRPRWTPLYGTFTLPSMQLFS 122 RA + P+W + G F++ SM+LF+ Sbjct: 66 RANPNASPKWQDVLGQFSMVSMELFN 91 >11_06_0622 - 25600563-25600817,25601041-25601109,25601251-25601437, 25601575-25601688,25603581-25603714,25603818-25604336 Length = 425 Score = 27.9 bits (59), Expect = 6.7 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -3 Query: 116 EIGPYIDDAAFVFADQREKI*QT--YPGTDLDEQY 18 EIGPY +D + + +Q EK+ +T G D EQ+ Sbjct: 278 EIGPYFNDRSAITEEQSEKLAKTGNKVGDDATEQF 312 >02_04_0184 - 20737884-20738179,20738611-20739169,20740009-20740440, 20740556-20740957 Length = 562 Score = 27.9 bits (59), Expect = 6.7 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = +3 Query: 21 LFVEICPRISLSDFFSLICEDKCCVVDIR 107 L + +C F +L+C D CC++D R Sbjct: 249 LILSLCLSEGFDTFPTLLCADGCCMIDRR 277 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,025,544 Number of Sequences: 37544 Number of extensions: 366663 Number of successful extensions: 948 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 938 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 948 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1454766756 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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