BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1303 (610 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding pr... 25 1.9 AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding pr... 25 1.9 AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse t... 25 2.5 AY805323-1|AAV66543.1| 459|Anopheles gambiae beta subunit-GABA-... 23 7.7 AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 7.7 >AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding protein AgamOBP31 protein. Length = 313 Score = 25.0 bits (52), Expect = 1.9 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = +3 Query: 69 LICEDKCCVVDI-RSNLLYEKSCIDGSVNV--PYSGVHLGRHELRALGPQPERALQQAIK 239 L C K + D+ + LY CID + SG+HL R +R L R L + K Sbjct: 173 LQCYSKGDLPDVPETRCLYH--CIDHRTGLYTTESGIHLSRFYVRDLEVNDLRYLSKETK 230 Query: 240 MKRNVVIASAEDETAQLFSDY 302 R+ V S D +++++ + Sbjct: 231 ACRDRVRMSGCDVCSEVYNTH 251 >AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding protein 1 protein. Length = 304 Score = 25.0 bits (52), Expect = 1.9 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = +3 Query: 69 LICEDKCCVVDI-RSNLLYEKSCIDGSVNV--PYSGVHLGRHELRALGPQPERALQQAIK 239 L C K + D+ + LY CID + SG+HL R +R L R L + K Sbjct: 173 LQCYSKGDLPDVPETRCLYH--CIDHRTGLYTTESGIHLSRFYVRDLEVNDLRYLSKETK 230 Query: 240 MKRNVVIASAEDETAQLFSDY 302 R+ V S D +++++ + Sbjct: 231 ACRDRVRMSGCDVCSEVYNTH 251 >AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse transcriptase protein. Length = 132 Score = 24.6 bits (51), Expect = 2.5 Identities = 8/13 (61%), Positives = 11/13 (84%) Frame = -2 Query: 480 TRGLPCFFFRRAG 442 +R +PCFF+R AG Sbjct: 119 SRSIPCFFWRSAG 131 >AY805323-1|AAV66543.1| 459|Anopheles gambiae beta subunit-GABA-A-gated chloride channelprotein. Length = 459 Score = 23.0 bits (47), Expect = 7.7 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 364 LIYLRSS*HRPPGTQENEFNQHEIQTASSPEKKTRQATGRYHR 492 ++Y RS+ R G +E E Q I + ++K + ATG Y R Sbjct: 171 VMYWRSTPIR--GVEEAELPQFTIIGYETNDRKEKLATGIYQR 211 >AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. Length = 786 Score = 23.0 bits (47), Expect = 7.7 Identities = 8/27 (29%), Positives = 14/27 (51%) Frame = +3 Query: 240 MKRNVVIASAEDETAQLFSDYLVKCGV 320 ++ NV +A + + D L+KC V Sbjct: 166 LRSNVTVADGSENRVEGVGDCLIKCAV 192 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 636,846 Number of Sequences: 2352 Number of extensions: 12462 Number of successful extensions: 29 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 29 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 59291487 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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